C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00066R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100312-ENSG00000079974 CGP 9606 22:50738196-50783663
GeneTranscriptPositionBiotype
ENSG00000079974 (RABL2B)
RAB, member of RAS oncogene family-like 2B 		ENST00000354869 (RABL2B-007) 50767504-50783621 protein_coding
ENST00000395590 (RABL2B-004) 50771210-50783630 protein_coding
ENST00000395591 (RABL2B-003) 50767506-50783662 protein_coding
ENST00000395593 (RABL2B-008) 50767506-50783642 protein_coding
ENST00000395595 (RABL2B-006) 50767506-50783663 protein_coding
ENST00000395598 (RABL2B-001) 50767506-50783659 protein_coding
ENST00000413505 (RABL2B-011) 50782234-50783045 protein_coding
ENST00000425098 (RABL2B-009) 50767506-50782314 nonsense_mediated_decay
ENST00000435118 (RABL2B-201) 50767501-50783662 protein_coding
ENST00000436958 (RABL2B-002) 50767530-50783638 nonsense_mediated_decay
ENST00000464678 (RABL2B-012) 50769782-50783286 retained_intron
ENST00000464740 (RABL2B-015) 50777660-50783630 retained_intron
ENST00000465063 (RABL2B-010) 50767509-50770502 processed_transcript
ENST00000468451 (RABL2B-014) 50775771-50783600 nonsense_mediated_decay
ENST00000482308 (RABL2B-013) 50769527-50775833 retained_intron
ENSG00000100312 (ACR)
acrosin 		ENST00000216139 (ACR-001) 50738196-50745334 protein_coding
ENST00000527761 (ACR-004) 50744144-50744910 processed_transcript
ENST00000529621 (ACR-003) 50738230-50740757 protein_coding
ENST00000533930 (ACR-002) 50738196-50740359 retained_intron
ENSG00000213683 (AC002056.3)
 ENST00000395613 (AC002056.3-001) 50754675-50755434 processed_pseudogene
ENSG00000254499 (AC002056.5)
 ENST00000532913 (AC002056.5-001) 50740593-50743520 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00066R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022622-ENSMUSG00000022621 CGP 10090 15:89568326-89591923
GeneTranscriptPositionBiotype
ENSMUSG00000022621 (Rabl2)
RAB, member RAS oncogene family-like 2 		ENSMUST00000023294 (Rabl2-001) 89582533-89591923 protein_coding
ENSMUST00000094056 (Rabl2-002) 89582537-89591864 protein_coding
ENSMUST00000163376 (Rabl2-003) 89586232-89591905 retained_intron
ENSMUST00000165747 (Rabl2-004) 89582537-89591865 retained_intron
ENSMUST00000169466 (Rabl2-010) 89583355-89591890 nonsense_mediated_decay
ENSMUST00000170126 (Rabl2-009) 89583644-89591886 nonsense_mediated_decay
ENSMUST00000171142 (Rabl2-007) 89587893-89591876 processed_transcript
ENSMUST00000171580 (Rabl2-008) 89583383-89591839 nonsense_mediated_decay
ENSMUST00000171826 (Rabl2-005) 89583398-89584317 protein_coding
ENSMUST00000172053 (Rabl2-006) 89583041-89590399 nonsense_mediated_decay
ENSMUST00000172074 (Rabl2-011) 89583313-89584542 retained_intron
ENSMUSG00000022622 (Acr)
acrosin prepropeptide 		ENSMUST00000023295 (Acr-201) 89568326-89574585 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066R_0001ENSG00000079974ENST00000354869ENST00000395590ENST00000395591ENST00000395593ENST00000395595ENST00000395598ENST00000413505ENST00000425098ENST00000435118ENST00000436958ENST00000464678ENST00000464740ENST00000465063ENST00000468451ENST00000482308ENSG00000100312ENST00000216139ENST00000527761ENST00000529621ENST00000533930ENSG00000213683ENST00000395613ENSG00000254499ENST00000532913CIL_00066R_0002ENSMUSG00000022621ENSMUST00000023294ENSMUST00000094056ENSMUST00000163376ENSMUST00000165747ENSMUST00000169466ENSMUST00000170126ENSMUST00000171142ENSMUST00000171580ENSMUST00000171826ENSMUST00000172053ENSMUST00000172074ENSMUSG00000022622ENSMUST00000023295
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066R_0001ENSG00000079974ENST00000354869ENST00000395590ENST00000395591ENST00000395595ENST00000395598ENST00000425098ENST00000464678ENST00000465063ENSG00000100312ENST00000216139ENST00000527761ENST00000529621ENST00000533930ENSG00000213683ENST00000395613ENSG00000254499ENST00000532913CIL_00066R_0002ENSMUSG00000022621ENSMUST00000023294ENSMUST00000094056ENSMUST00000163376ENSMUST00000165747ENSMUST00000169466ENSMUST00000170126ENSMUST00000171580ENSMUST00000172053ENSMUST00000172074ENSMUSG00000022622ENSMUST00000023295
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079974 ENST00000354869 N/A N/A 0.924±0.00 N/A N/A 0.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395590 N/A N/A N/A 1.803±0.00 1.135±0.00 0.686±0.02 0.428±0.00 1.585±0.00 0.696±0.00 1.022±0.26 0.100±0.00 2.012±0.21 1.121±0.00 3.323±1.61
ENST00000395591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A N/A
ENST00000395593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395595 1.456±0.00 3.106±0.00 N/A 3.191±0.93 2.212±0.00 1.606±0.00 0.662±0.00 3.002±0.00 0.371±0.00 2.949±0.00 N/A 2.034±0.70 2.125±0.19 3.751±0.18
ENST00000395598 N/A N/A N/A N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A N/A N/A N/A
ENST00000413505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425098 N/A N/A 0.955±0.00 N/A N/A N/A N/A N/A 0.350±0.00 N/A N/A 1.947±0.00 N/A N/A
ENST00000435118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.433±0.00 N/A N/A N/A
ENST00000464740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465063 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.834±0.00 N/A 1.601±0.00 N/A 2.994±1.68
ENST00000468451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100312 ENST00000216139 0.466±0.00 0.564±0.00 0.180±0.00 0.198±0.00 0.114±0.00 0.106±0.00 0.042±0.00 N/A 0.170±0.00 0.055±0.00 N/A 0.198±0.06 0.098±0.00 33.260±20.47
ENST00000527761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.00 0.156±0.06 N/A
ENST00000529621 N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A 0.211±0.13 0.467±0.18 0.052±0.00 0.089±0.03 0.286±0.00 6.646±0.00
ENST00000533930 0.116±0.00 0.426±0.00 N/A 0.443±0.00 0.133±0.00 N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000213683 ENST00000395613 N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A 0.017±0.00 N/A N/A 0.042±0.02 0.032±0.00 0.140±0.05
ENSG00000254499 ENST00000532913 N/A N/A N/A 0.485±0.00 0.817±0.00 N/A N/A N/A 0.712±0.00 0.539±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022621 ENSMUST00000023294 3.961±0.82 1.123±0.32 6.969±1.28 18.561±12.34 2.528±1.24 1.767±0.53 0.987±0.21 3.140±0.53 2.446±1.37 4.280±0.70 0.630±0.24 11.883±4.41 3.574±1.41 43.740±1.41
ENSMUST00000094056 N/A N/A N/A N/A N/A N/A N/A 1.444±0.00 N/A N/A N/A 2.590±0.00 N/A N/A
ENSMUST00000163376 N/A N/A N/A N/A 0.769±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165747 1.267±0.62 N/A N/A 7.135±2.57 1.604±0.22 1.333±0.67 0.287±0.00 2.073±0.00 0.551±0.16 1.313±0.32 0.164±0.03 4.771±1.13 0.806±0.00 N/A
ENSMUST00000169466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 57.771±0.00 N/A 208.683±0.00
ENSMUST00000170126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.507±0.00 5.696±0.00 N/A N/A
ENSMUST00000171142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.747±0.00 N/A
ENSMUST00000171826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172053 N/A N/A N/A 18.144±0.00 N/A N/A N/A N/A N/A N/A N/A 11.763±0.00 10.465±1.19 29.240±0.00
ENSMUST00000172074 N/A N/A N/A 7.124±0.00 N/A N/A N/A N/A N/A N/A 0.466±0.03 N/A N/A N/A
ENSMUSG00000022622 ENSMUST00000023295 N/A 0.096±0.01 N/A 2.618±0.38 0.195±0.17 0.107±0.06 N/A 0.179±0.12 0.050±0.03 N/A 0.125±0.09 0.457±0.19 0.098±0.05 163.254±70.15

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