C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00066W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112837-ENSG00000135318 CGP 9606 6:84687351-85495791
GeneTranscriptPositionBiotype
ENSG00000112837 (TBX18)
T-box 18 		ENST00000330469 (TBX18-007) 84687351-84688747 retained_intron
ENST00000369663 (TBX18-001) 84732602-84764519 protein_coding
ENST00000606325 (TBX18-003) 84744261-84763453 protein_coding
ENST00000606521 (TBX18-004) 84742024-84763448 processed_transcript
ENST00000606621 (TBX18-002) 84760283-84763355 protein_coding
ENST00000606784 (TBX18-006) 84687373-84763453 protein_coding
ENST00000607343 (TBX18-005) 84741067-84741802 processed_transcript
ENSG00000135318 (NT5E)
5'-nucleotidase, ecto (CD73) 		ENST00000257770 (NT5E-001) 85450091-85495778 protein_coding
ENST00000369646 (NT5E-002) 85450091-85471599 protein_coding
ENST00000369651 (NT5E-201) 85449584-85495791 protein_coding
ENST00000416334 (NT5E-003) 85471381-85492161 protein_coding
ENST00000437581 (NT5E-004) 85485397-85491325 protein_coding
ENSG00000213211 (KRT18P64)
keratin 18 pseudogene 64 		ENST00000434946 (KRT18P64-001) 85287789-85289007 processed_pseudogene
ENSG00000214460 (TPT1P6)
tumor protein, translationally-controlled 1 pseudogene 6 		ENST00000458298 (TPT1P6-001) 85427453-85427966 processed_pseudogene
ENSG00000216902 (RP1-161C16.1)
 ENST00000403365 (RP1-161C16.1-001) 85257328-85257694 processed_pseudogene
ENSG00000217060 (RP11-30P6.1)
 ENST00000402742 (RP11-30P6.1-001) 85286076-85290849 unprocessed_pseudogene
ENSG00000219604 (RP11-132M7.2)
 ENST00000405071 (RP11-132M7.2-001) 84689292-84689429 processed_pseudogene
ENSG00000228290 (RP11-132M7.3)
 ENST00000423086 (RP11-132M7.3-001) 84689505-84709534 antisense
ENST00000441863 (RP11-132M7.3-002) 84694987-84709527 antisense
ENST00000586398 (RP11-132M7.3-005) 84689460-84709446 antisense
ENST00000586938 (RP11-132M7.3-009) 84697512-84709504 antisense
ENST00000587281 (RP11-132M7.3-006) 84689460-84709496 antisense
ENST00000589304 (RP11-132M7.3-003) 84689425-84709504 antisense
ENST00000590270 (RP11-132M7.3-007) 84689461-84709493 antisense
ENST00000591225 (RP11-132M7.3-008) 84689461-84707614 antisense
ENST00000592681 (RP11-132M7.3-004) 84689449-84709493 antisense
ENST00000620850 (RP11-132M7.3-010) 84689452-84709481 antisense
ENSG00000234155 (RP11-30P6.6)
 ENST00000455071 (RP11-30P6.6-001) 85387219-85390186 lincRNA
CIL_00066W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032419-ENSMUSG00000032420 CGP 10090 9:87702800-88372092
GeneTranscriptPositionBiotype
ENSMUSG00000032419 (Tbx18)
T-box18 		ENSMUST00000034991 (Tbx18-001) 87702800-87731260 protein_coding
ENSMUST00000186698 (Tbx18-002) 87724397-87730497 processed_transcript
ENSMUSG00000032420 (Nt5e)
5' nucleotidase, ecto 		ENSMUST00000034992 (Nt5e-001) 88327197-88372092 protein_coding
ENSMUST00000186789 (Nt5e-003) 88327618-88331219 retained_intron
ENSMUST00000187166 (Nt5e-002) 88327633-88367844 retained_intron
ENSMUSG00000099886 (RP23-338I1.3)
predicted gene 2324 		ENSMUST00000187464 (RP23-338I1.3-001) 88121295-88122765 processed_pseudogene
ENSMUSG00000100337 (RP23-118M23.7)
predicted gene 5066 		ENSMUST00000188479 (RP23-118M23.7-001) 88280369-88281190 processed_pseudogene
ENSMUSG00000100782 (RP23-118M23.4)
predicted gene 28231 		ENSMUST00000190118 (RP23-118M23.4-001) 88259895-88263035 lincRNA
ENSMUSG00000102075 (RP23-338I1.1)
predicted gene 5368 		ENSMUST00000189012 (RP23-338I1.1-001) 88145969-88146554 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066W_0001ENSG00000112837ENST00000330469ENST00000369663ENST00000606325ENST00000606521ENST00000606621ENST00000606784ENST00000607343ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENST00000437581ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000219604ENST00000405071ENSG00000228290ENST00000423086ENST00000441863ENST00000586398ENST00000586938ENST00000587281ENST00000589304ENST00000590270ENST00000591225ENST00000592681ENST00000620850ENSG00000234155ENST00000455071CIL_00066W_0002ENSMUSG00000032419ENSMUST00000034991ENSMUST00000186698ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000102075ENSMUST00000189012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066W_0001ENSG00000112837ENST00000330469ENST00000369663ENST00000606325ENST00000606784ENST00000607343ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000219604ENST00000405071ENSG00000228290ENST00000423086ENST00000441863ENST00000586398ENST00000587281ENST00000589304ENST00000590270ENSG00000234155ENST00000455071CIL_00066W_0002ENSMUSG00000032419ENSMUST00000034991ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000102075ENSMUST00000189012
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112837 ENST00000330469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.981±0.00 N/A N/A N/A
ENST00000369663 1.451±0.00 1.052±0.00 N/A 0.107±0.05 0.856±0.51 0.592±0.00 0.474±0.00 N/A 0.556±0.54 0.203±0.00 0.076±0.00 0.506±0.18 0.314±0.05 0.663±0.36
ENST00000606325 N/A N/A N/A 0.578±0.00 N/A N/A 0.662±0.00 N/A 0.075±0.00 N/A 0.962±0.47 N/A N/A N/A
ENST00000606521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606784 N/A N/A N/A 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A
ENST00000607343 0.133±0.00 0.158±0.00 N/A 0.227±0.00 0.402±0.19 0.063±0.01 0.081±0.01 N/A 1.975±0.00 N/A N/A 0.130±0.08 N/A 0.034±0.00
ENSG00000135318 ENST00000257770 9.870±0.00 9.598±0.00 0.897±0.00 2.445±0.12 5.257±0.66 6.907±3.45 1.151±0.74 6.071±2.28 6.442±0.89 1.856±0.73 0.659±0.23 7.980±5.61 14.792±5.45 5.535±1.35
ENST00000369646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A
ENST00000369651 N/A N/A N/A N/A N/A 1.057±0.40 N/A N/A N/A 0.870±0.29 N/A N/A N/A 1.001±0.00
ENST00000416334 N/A N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000437581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213211 ENST00000434946 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.073±0.06
ENSG00000214460 ENST00000458298 0.572±0.00 0.995±0.00 N/A 0.209±0.00 0.464±0.00 0.781±0.00 0.207±0.00 0.519±0.00 0.111±0.00 0.260±0.00 1.375±0.00 0.550±0.04 0.473±0.00 0.464±0.18
ENSG00000216902 ENST00000403365 N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217060 ENST00000402742 N/A N/A N/A 0.014±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.006±0.00 0.016±0.00 N/A 0.025±0.01
ENSG00000219604 ENST00000405071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.619±0.00 N/A N/A
ENSG00000228290 ENST00000423086 0.040±0.00 0.175±0.00 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A 8.090±0.00
ENST00000441863 N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 3.624±0.00
ENST00000586398 N/A N/A N/A N/A N/A N/A N/A N/A 0.669±0.00 N/A N/A 0.040±0.00 0.095±0.00 N/A
ENST00000586938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587281 N/A 0.085±0.00 N/A N/A N/A 0.041±0.00 0.121±0.00 N/A 0.078±0.00 N/A 0.096±0.00 N/A N/A N/A
ENST00000589304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.794±0.11
ENST00000590270 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 0.128±0.00 0.396±0.00 0.315±0.00 N/A N/A N/A
ENST00000591225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234155 ENST00000455071 N/A 0.013±0.00 0.851±0.00 0.017±0.00 0.059±0.06 0.716±0.41 0.064±0.00 2.279±1.89 0.822±0.00 N/A N/A 0.037±0.01 N/A 0.029±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032419 ENSMUST00000034991 1.035±0.65 0.656±0.21 1.188±0.78 0.881±0.69 2.431±0.62 0.046±0.02 0.475±0.25 0.179±0.10 0.013±0.01 0.247±0.18 0.099±0.03 0.089±0.06 0.079±0.06 0.204±0.15
ENSMUST00000186698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032420 ENSMUST00000034992 1.153±0.75 1.301±0.55 17.068±2.11 0.749±0.18 2.911±0.47 12.141±3.84 3.581±0.60 10.411±2.02 11.110±5.23 16.769±0.59 0.475±0.10 1.632±0.53 12.625±7.78 2.510±0.84
ENSMUST00000186789 N/A 1.225±1.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187166 N/A 0.773±0.00 N/A N/A 0.878±0.09 6.639±2.41 0.584±0.00 N/A N/A N/A N/A 0.802±0.32 N/A N/A
ENSMUSG00000099886 ENSMUST00000187464 N/A N/A N/A 0.030±0.00 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100337 ENSMUST00000188479 0.105±0.02 N/A 0.023±0.00 N/A N/A 0.243±0.09 0.132±0.02 0.084±0.00 0.044±0.00 0.096±0.00 N/A N/A 0.050±0.00 0.164±0.05
ENSMUSG00000100782 ENSMUST00000190118 0.016±0.00 N/A N/A N/A N/A 0.048±0.02 0.172±0.05 0.014±0.00 N/A 0.082±0.02 N/A 0.094±0.04 0.012±0.01 0.015±0.00
ENSMUSG00000102075 ENSMUST00000189012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A

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