C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00067M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173145-ENSG00000108239 CGP 9606 10:94333226-94535930
GeneTranscriptPositionBiotype
ENSG00000108239 (TBC1D12)
TBC1 domain family, member 12 		ENST00000225235 (TBC1D12-001) 94402504-94535930 protein_coding
ENST00000457045 (TBC1D12-004) 94534339-94535928 processed_transcript
ENST00000485048 (TBC1D12-003) 94508442-94533297 processed_transcript
ENSG00000119969 (HELLS)
helicase, lymphoid-specific 		ENST00000239026 (HELLS-201) 94501434-94602098 protein_coding
ENST00000348459 (HELLS-001) 94545817-94602099 protein_coding
ENST00000371327 (HELLS-002) 94590699-94613905 protein_coding
ENST00000371332 (HELLS-202) 94501434-94602098 protein_coding
ENST00000394036 (HELLS-203) 94545922-94602098 protein_coding
ENST00000394045 (HELLS-204) 94545922-94602098 protein_coding
ENST00000419900 (HELLS-003) 94545790-94574106 protein_coding
ENST00000462057 (HELLS-004) 94554124-94571280 processed_transcript
ENST00000464030 (HELLS-006) 94590742-94592514 retained_intron
ENST00000466552 (HELLS-005) 94569195-94574448 retained_intron
ENST00000475263 (HELLS-007) 94596880-94601971 retained_intron
ENSG00000173145 (NOC3L)
nucleolar complex associated 3 homolog (S. cerevisiae) 		ENST00000371361 (NOC3L-001) 94333226-94362939 protein_coding
ENST00000461562 (NOC3L-003) 94361324-94362959 processed_transcript
ENST00000463649 (NOC3L-002) 94346476-94362939 processed_transcript
CIL_00067M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024999-ENSMUSG00000048720 CGP 10090 19:38788128-38919923
GeneTranscriptPositionBiotype
ENSMUSG00000024999 (Noc3l)
nucleolar complex associated 3 homolog (S. cerevisiae) 		ENSMUST00000025963 (Noc3l-201) 38788128-38819237 protein_coding
ENSMUSG00000048720 (Tbc1d12)
TBC1D12: TBC1 domain family, member 12 		ENSMUST00000037302 (Tbc1d12-201) 38836579-38919923 protein_coding
ENSMUSG00000089545 (Gm25838)
predicted gene, 25838 		ENSMUST00000158920 (Gm25838-201) 38885242-38885361 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067M_0001ENSG00000108239ENST00000225235ENST00000457045ENST00000485048ENSG00000119969ENST00000239026ENST00000348459ENST00000371327ENST00000371332ENST00000394036ENST00000394045ENST00000419900ENST00000462057ENST00000464030ENST00000466552ENST00000475263ENSG00000173145ENST00000371361ENST00000461562ENST00000463649CIL_00067M_0002ENSMUSG00000024999ENSMUST00000025963ENSMUSG00000048720ENSMUST00000037302ENSMUSG00000089545ENSMUST00000158920
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067M_0001ENSG00000108239ENST00000225235ENST00000485048ENSG00000119969ENST00000239026ENST00000348459ENST00000371327ENST00000371332ENST00000394045ENST00000419900ENST00000466552ENST00000475263ENSG00000173145ENST00000371361ENST00000461562ENST00000463649CIL_00067M_0002ENSMUSG00000024999ENSMUST00000025963ENSMUSG00000048720ENSMUST00000037302ENSMUSG00000089545ENSMUST00000158920
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108239 ENST00000225235 2.739±0.00 1.328±0.00 N/A 5.725±0.59 3.021±0.45 2.779±0.53 0.954±0.17 0.726±0.00 1.286±0.77 2.191±0.93 1.127±0.47 1.911±0.40 1.241±0.68 6.429±1.81
ENST00000457045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485048 N/A N/A 1.622±0.00 N/A 2.275±0.00 1.311±0.00 0.586±0.00 0.908±0.00 1.608±0.00 N/A 1.109±0.00 1.856±0.00 N/A N/A
ENSG00000119969 ENST00000239026 0.083±0.00 N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000348459 0.078±0.00 0.678±0.00 0.431±0.00 N/A 0.629±0.34 N/A N/A 0.203±0.00 1.172±0.00 N/A 0.097±0.00 3.050±2.69 0.860±0.76 5.047±0.02
ENST00000371327 N/A 0.618±0.00 N/A 0.178±0.11 0.128±0.00 0.028±0.00 0.086±0.00 0.201±0.00 0.085±0.00 0.265±0.16 0.033±0.00 1.632±1.29 0.335±0.19 2.794±1.09
ENST00000371332 N/A N/A N/A N/A N/A N/A N/A 0.694±0.00 N/A N/A N/A N/A N/A N/A
ENST00000394036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A
ENST00000419900 N/A N/A 0.987±0.00 N/A N/A N/A 0.138±0.00 0.632±0.00 0.214±0.00 N/A N/A 3.287±0.00 1.601±0.00 N/A
ENST00000462057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466552 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A
ENST00000475263 N/A N/A N/A N/A N/A 0.231±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173145 ENST00000371361 1.647±0.00 N/A 0.142±0.00 1.118±0.22 2.513±0.54 2.178±1.13 1.774±0.00 1.784±0.00 2.351±0.57 1.752±0.52 3.609±0.00 4.484±2.17 2.502±1.54 4.251±1.87
ENST00000461562 N/A N/A 0.893±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463649 N/A N/A N/A N/A 2.196±0.00 N/A 0.573±0.00 N/A 1.036±0.00 N/A 0.798±0.00 1.288±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024999 ENSMUST00000025963 3.298±1.91 3.338±1.39 1.917±0.05 2.616±0.83 1.932±0.85 1.236±0.59 0.698±0.19 1.561±0.38 2.980±1.75 2.461±0.17 1.577±0.19 4.145±1.92 5.222±2.39 2.306±0.46
ENSMUSG00000048720 ENSMUST00000037302 2.927±0.99 4.089±1.45 2.465±0.20 3.857±1.03 2.543±1.77 2.456±0.87 1.182±0.16 1.954±0.79 1.753±0.38 2.786±0.79 0.505±0.23 4.852±1.63 1.652±0.15 2.810±1.06
ENSMUSG00000089545 ENSMUST00000158920 N/A N/A N/A 8.127±0.00 N/A N/A N/A N/A 1162.310±0.00 N/A N/A N/A 9.108±0.00 N/A

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