C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00068F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139620-ENSG00000129315 CGP 9606 12:48653401-48716998
GeneTranscriptPositionBiotype
ENSG00000129315 (CCNT1)
cyclin T1 		ENST00000261900 (CCNT1-001) 48688464-48716898 protein_coding
ENST00000417344 (CCNT1-004) 48693033-48716675 nonsense_mediated_decay
ENST00000550457 (CCNT1-002) 48705624-48714520 retained_intron
ENST00000551989 (CCNT1-003) 48693930-48695977 retained_intron
ENST00000618666 (CCNT1-201) 48688458-48716998 protein_coding
ENSG00000139620 (KANSL2)
KAT8 regulatory NSL complex subunit 2 		ENST00000420613 (KANSL2-002) 48653416-48682225 protein_coding
ENST00000546701 (KANSL2-003) 48653402-48682211 nonsense_mediated_decay
ENST00000547087 (KANSL2-007) 48653834-48669225 protein_coding
ENST00000547536 (KANSL2-010) 48671858-48680058 retained_intron
ENST00000547582 (KANSL2-014) 48671799-48681416 nonsense_mediated_decay
ENST00000548147 (KANSL2-004) 48653401-48679693 nonsense_mediated_decay
ENST00000548254 (KANSL2-012) 48681224-48682236 retained_intron
ENST00000548304 (KANSL2-011) 48681424-48682217 protein_coding
ENST00000548701 (KANSL2-013) 48653710-48662592 processed_transcript
ENST00000549463 (KANSL2-015) 48653689-48658674 processed_transcript
ENST00000549574 (KANSL2-006) 48653869-48681610 nonsense_mediated_decay
ENST00000550347 (KANSL2-001) 48653402-48682225 protein_coding
ENST00000550870 (KANSL2-008) 48679761-48682238 protein_coding
ENST00000550931 (KANSL2-009) 48671919-48682238 protein_coding
ENST00000553086 (KANSL2-005) 48653889-48682158 protein_coding
ENSG00000206612 (SNORA2A)
small nucleolar RNA, H/ACA box 2A 		ENST00000383885 (SNORA2A-201) 48656648-48656782 snoRNA
ENSG00000207313 (SNORA2B)
small nucleolar RNA, H/ACA box 2B 		ENST00000384583 (SNORA2B-201) 48667457-48667593 snoRNA
ENSG00000221491 (SNORA34)
small nucleolar RNA, H/ACA box 34 		ENST00000408564 (SNORA34-201) 48654382-48654518 snoRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00068F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022992-ENSMUSG00000011960 CGP 10090 15:98518821-98570923
GeneTranscriptPositionBiotype
ENSMUSG00000011960 (Ccnt1)
cyclin T1 		ENSMUST00000012104 (Ccnt1-201) 98543211-98567636 protein_coding
ENSMUST00000130921 (Ccnt1-002) 98558598-98567680 retained_intron
ENSMUST00000163180 (Ccnt1-004) 98538699-98543020 processed_transcript
ENSMUST00000164294 (Ccnt1-006) 98544567-98565139 retained_intron
ENSMUST00000164565 (Ccnt1-008) 98548652-98567545 retained_intron
ENSMUST00000168928 (Ccnt1-003) 98543211-98567636 nonsense_mediated_decay
ENSMUST00000169674 (Ccnt1-005) 98544340-98547020 retained_intron
ENSMUST00000169707 (Ccnt1-001) 98538689-98570923 protein_coding
ENSMUST00000170452 (Ccnt1-007) 98544139-98554685 retained_intron
ENSMUSG00000022992 (Kansl2)
KAT8 regulatory NSL complex subunit 2 		ENSMUST00000023727 (Kansl2-201) 98518821-98534244 protein_coding
ENSMUST00000116400 (Kansl2-202) 98519101-98534221 protein_coding
ENSMUSG00000065336 (Snora34)
small nucleolar RNA, H/ACA box 34 		ENSMUST00000083402 (Snora34-201) 98519716-98519853 snoRNA
ENSMUSG00000065939 (Snora2b)
small nucleolar RNA, H/ACA box 2B 		ENSMUST00000084005 (Snora2b-201) 98526346-98526482 snoRNA
ENSMUSG00000091050 (9330020H09Rik)
RIKEN cDNA 9330020H09 gene 		ENSMUST00000163781 (9330020H09Rik-001) 98567324-98569583 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068F_0001ENSG00000129315ENST00000261900ENST00000417344ENST00000550457ENST00000551989ENST00000618666ENSG00000139620ENST00000420613ENST00000546701ENST00000547087ENST00000547536ENST00000547582ENST00000548147ENST00000548254ENST00000548304ENST00000548701ENST00000549463ENST00000549574ENST00000550347ENST00000550870ENST00000550931ENST00000553086ENSG00000206612ENST00000383885ENSG00000207313ENST00000384583ENSG00000221491ENST00000408564CIL_00068F_0002ENSMUSG00000011960ENSMUST00000012104ENSMUST00000130921ENSMUST00000163180ENSMUST00000164294ENSMUST00000164565ENSMUST00000168928ENSMUST00000169674ENSMUST00000169707ENSMUST00000170452ENSMUSG00000022992ENSMUST00000023727ENSMUST00000116400ENSMUSG00000065336ENSMUST00000083402ENSMUSG00000065939ENSMUST00000084005ENSMUSG00000091050ENSMUST00000163781
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068F_0001ENSG00000129315ENST00000261900ENST00000417344ENST00000551989ENST00000618666ENSG00000139620ENST00000420613ENST00000546701ENST00000547087ENST00000548147ENST00000548254ENST00000548701ENST00000549463ENST00000549574ENST00000550347ENST00000550931ENST00000553086ENSG00000206612ENST00000383885ENSG00000207313ENST00000384583ENSG00000221491ENST00000408564CIL_00068F_0002ENSMUSG00000011960ENSMUST00000012104ENSMUST00000168928ENSMUST00000169674ENSMUST00000169707ENSMUST00000170452ENSMUSG00000022992ENSMUST00000023727ENSMUST00000116400ENSMUSG00000065336ENSMUST00000083402ENSMUSG00000065939ENSMUST00000084005ENSMUSG00000091050ENSMUST00000163781
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129315 ENST00000261900 1.504±0.00 0.763±0.00 N/A 2.375±0.26 1.909±0.00 2.160±0.16 1.791±0.53 2.956±0.84 1.017±0.02 2.642±0.00 3.882±0.00 1.921±1.11 0.908±0.05 4.507±0.11
ENST00000417344 N/A N/A 1.049±0.00 N/A 1.518±0.00 2.953±0.00 0.769±0.00 N/A 3.482±0.00 2.055±0.00 0.831±0.00 2.854±0.00 N/A 5.142±0.00
ENST00000550457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.583±0.00
ENST00000618666 1.265±0.00 N/A N/A 0.611±0.00 N/A N/A N/A N/A N/A N/A 1.202±0.00 1.352±0.42 0.416±0.00 0.986±0.00
ENSG00000139620 ENST00000420613 1.603±0.00 4.494±0.00 N/A 3.528±1.38 2.800±0.38 3.353±0.00 2.402±2.08 6.507±0.00 2.538±0.71 3.782±1.03 0.589±0.00 6.059±2.36 4.532±0.68 9.930±3.93
ENST00000546701 N/A 2.532±0.00 N/A N/A 1.504±0.00 N/A N/A N/A N/A N/A N/A N/A 1.140±0.00 N/A
ENST00000547087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.550±0.00 N/A 4.826±0.00 N/A
ENST00000547536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548147 0.597±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.722±0.30 1.894±0.05 7.432±0.00
ENST00000548254 N/A N/A 4.991±0.00 2.965±0.00 N/A 4.584±0.00 N/A N/A 6.304±0.00 N/A N/A 9.189±0.00 N/A N/A
ENST00000548304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548701 0.853±0.00 N/A N/A N/A 3.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549463 N/A N/A N/A N/A N/A 4.120±0.00 N/A N/A N/A N/A N/A 10.578±0.00 4.760±0.00 11.857±0.00
ENST00000549574 0.685±0.00 N/A N/A N/A 0.948±0.00 1.708±0.00 1.067±0.00 N/A 1.645±0.00 N/A N/A N/A N/A N/A
ENST00000550347 N/A N/A 0.468±0.00 N/A 0.609±0.00 2.038±0.00 0.189±0.00 0.506±0.00 N/A N/A N/A 1.316±0.00 N/A N/A
ENST00000550870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550931 N/A N/A N/A N/A N/A N/A N/A 2.767±0.00 N/A N/A N/A N/A N/A N/A
ENST00000553086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.704±0.00 N/A N/A
ENSG00000206612 ENST00000383885 N/A 2.614±0.00 N/A 5.652±5.13 29.931±0.00 6.218±5.98 10.527±10.30 1.520±0.00 9.917±0.00 30.476±0.00 33.957±0.00 15.095±20.72 0.851±0.00 0.496±0.10
ENSG00000207313 ENST00000384583 N/A N/A N/A N/A 3.521±0.00 N/A 11.891±11.77 N/A 51.428±0.00 20.572±0.00 N/A 12.036±15.79 1.466±0.96 0.470±0.00
ENSG00000221491 ENST00000408564 N/A N/A N/A 23.682±0.00 13.086±12.24 12.214±0.00 30.345±0.00 26.654±0.00 8.557±8.11 53.688±0.00 N/A 20.268±26.98 2.341±0.00 0.371±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000011960 ENSMUST00000012104 2.393±0.74 1.670±0.43 N/A N/A 3.081±0.65 2.437±0.66 1.537±0.29 2.115±0.45 1.585±0.10 3.434±0.98 N/A 2.811±0.44 5.986±0.00 4.335±0.42
ENSMUST00000130921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168928 N/A N/A N/A N/A N/A 1.382±0.06 N/A N/A N/A N/A N/A N/A N/A 0.909±0.00
ENSMUST00000169674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.011±0.00
ENSMUST00000169707 2.115±1.19 1.820±0.15 5.280±0.11 3.712±0.23 1.755±0.97 1.419±0.66 1.682±0.63 0.957±0.43 1.487±0.54 3.062±1.90 1.890±0.63 2.370±2.23 4.149±2.57 1.244±0.52
ENSMUST00000170452 N/A 2.448±0.00 N/A N/A N/A 3.083±0.00 N/A N/A N/A 4.692±0.00 N/A 7.344±1.29 N/A 3.830±0.00
ENSMUSG00000022992 ENSMUST00000023727 4.080±1.37 8.506±0.79 5.845±0.66 14.846±9.48 5.586±1.20 2.400±0.00 6.411±1.86 4.586±1.87 5.707±4.11 4.977±1.80 6.183±2.52 N/A 4.422±2.67 2.937±0.38
ENSMUST00000116400 7.236±2.60 23.101±3.47 8.956±0.61 16.134±6.89 7.254±1.48 6.401±0.39 5.232±0.46 7.125±0.70 7.789±5.01 8.078±0.98 12.462±3.15 10.151±3.16 6.382±2.85 2.892±1.13
ENSMUSG00000065336 ENSMUST00000083402 873.406±0.00 393.655±0.00 N/A 24.748±25.73 762.556±0.00 N/A 601.246±0.00 N/A 10.292±2.23 N/A 4.687±2.50 137.894±0.00 12.561±9.64 10.016±0.00
ENSMUSG00000065939 ENSMUST00000084005 N/A N/A 6.983±0.00 5.114±1.48 N/A N/A N/A N/A 5.587±1.28 N/A N/A 27.467±18.34 26.404±9.63 21.955±0.00
ENSMUSG00000091050 ENSMUST00000163781 N/A 0.905±0.19 N/A N/A 1.205±0.00 1.137±0.10 N/A 1.127±0.00 1.059±0.00 N/A N/A N/A N/A 2.179±0.17

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