C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00068R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165030-ENSG00000169071 CGP 9606 9:91409045-91950162
GeneTranscriptPositionBiotype
ENSG00000165030 (NFIL3)
nuclear factor, interleukin 3 regulated 		ENST00000297689 (NFIL3-001) 91409045-91423862 protein_coding
ENSG00000169071 (ROR2)
receptor tyrosine kinase-like orphan receptor 2 		ENST00000375708 (ROR2-001) 91722597-91950162 protein_coding
ENST00000375715 (ROR2-002) 91563091-91948880 protein_coding
ENST00000476440 (ROR2-005) 91923653-91949906 processed_transcript
ENST00000493846 (ROR2-004) 91923668-91948715 processed_transcript
ENST00000495386 (ROR2-003) 91757334-91948676 processed_transcript
ENST00000546883 (ROR2-007) 91757436-91948741 processed_transcript
ENST00000548585 (ROR2-008) 91755940-91775781 retained_intron
ENST00000550066 (ROR2-006) 91722602-91887199 processed_transcript
ENSG00000228595 (PAICSP2)
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 2 		ENST00000429118 (PAICSP2-001) 91611343-91612492 processed_pseudogene
ENSG00000233081 (RP11-440G5.2)
 ENST00000442072 (RP11-440G5.2-001) 91426238-91427144 lincRNA
CIL_00068R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056749-ENSMUSG00000021464 CGP 10090 13:52967209-53286124
GeneTranscriptPositionBiotype
ENSMUSG00000021464 (Ror2)
receptor tyrosine kinase-like orphan receptor 2 		ENSMUST00000021918 (Ror2-001) 53109317-53286124 protein_coding
ENSMUST00000130235 (Ror2-002) 53109312-53285549 protein_coding
ENSMUST00000149299 (Ror2-003) 53131960-53275658 processed_transcript
ENSMUSG00000056749 (Nfil3)
nuclear factor, interleukin 3, regulated 		ENSMUST00000071065 (Nfil3-001) 52967209-52981073 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068R_0001ENSG00000165030ENST00000297689ENSG00000169071ENST00000375708ENST00000375715ENST00000476440ENST00000493846ENST00000495386ENST00000546883ENST00000548585ENST00000550066ENSG00000228595ENST00000429118ENSG00000233081ENST00000442072CIL_00068R_0002ENSMUSG00000021464ENSMUST00000021918ENSMUST00000130235ENSMUST00000149299ENSMUSG00000056749ENSMUST00000071065
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068R_0001ENSG00000165030ENST00000297689ENSG00000169071ENST00000375708ENST00000375715ENST00000495386ENST00000550066ENSG00000228595ENST00000429118ENSG00000233081ENST00000442072CIL_00068R_0002ENSMUSG00000021464ENSMUST00000021918ENSMUST00000130235ENSMUSG00000056749ENSMUST00000071065
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165030 ENST00000297689 26.364±0.00 10.361±0.00 2.386±0.00 7.598±6.53 9.586±0.29 20.528±18.26 6.781±6.46 21.841±0.00 13.241±7.56 24.948±23.36 58.415±0.00 22.925±12.84 18.317±4.29 18.549±3.89
ENSG00000169071 ENST00000375708 0.587±0.00 0.753±0.00 0.105±0.00 0.158±0.12 1.077±0.13 8.027±7.71 0.122±0.09 1.141±0.00 2.647±0.00 2.306±1.77 0.047±0.03 9.765±5.76 4.112±0.58 6.389±3.02
ENST00000375715 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495386 N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550066 N/A N/A N/A 0.041±0.00 N/A N/A N/A 0.156±0.00 0.077±0.00 N/A N/A N/A N/A N/A
ENSG00000228595 ENST00000429118 N/A N/A N/A N/A N/A 0.225±0.00 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00
ENSG00000233081 ENST00000442072 0.133±0.00 0.462±0.00 N/A 0.084±0.00 0.319±0.00 N/A 0.051±0.00 0.079±0.00 0.139±0.00 0.048±0.00 0.120±0.00 0.396±0.07 0.234±0.00 1.602±1.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021464 ENSMUST00000021918 6.795±6.25 2.464±0.58 3.152±0.21 1.168±0.01 1.904±0.73 6.245±1.29 0.478±0.10 1.642±0.45 0.096±0.05 1.296±0.53 0.135±0.00 4.413±1.88 1.115±0.34 0.281±0.08
ENSMUST00000130235 0.515±0.02 1.829±0.45 N/A 0.133±0.00 0.985±0.51 2.272±1.18 0.293±0.00 0.605±0.00 0.056±0.04 0.720±0.00 0.085±0.03 1.607±0.54 0.452±0.08 0.820±0.17
ENSMUST00000149299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056749 ENSMUST00000071065 3.643±1.71 5.604±0.47 0.748±0.05 4.188±1.05 2.343±0.99 2.097±0.17 2.063±0.35 2.175±0.22 4.117±3.27 1.997±0.29 7.687±5.22 4.395±0.99 4.617±2.38 0.734±0.46

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