C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00069X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138758-ENSG00000118816 CGP 9606 4:76949703-77076005
GeneTranscriptPositionBiotype
ENSG00000118816 (CCNI)
cyclin I
ENST00000237654 (CCNI-001) 77047158-77076005 protein_coding
ENST00000504697 (CCNI-009) 77056065-77065080 processed_transcript
ENST00000505609 (CCNI-003) 77056044-77074910 protein_coding
ENST00000506614 (CCNI-007) 77055234-77056485 retained_intron
ENST00000507788 (CCNI-004) 77058559-77075989 protein_coding
ENST00000511943 (CCNI-005) 77055323-77075693 nonsense_mediated_decay
ENST00000513774 (CCNI-002) 77058510-77075332 protein_coding
ENST00000515468 (CCNI-008) 77048115-77056049 protein_coding
ENST00000515790 (CCNI-006) 77066165-77075620 retained_intron
ENSG00000138758 (SEPT11)
septin 11
ENST00000264893 (SEPT11-001) 76949703-77038614 protein_coding
ENST00000502401 (SEPT11-012) 77028717-77039115 protein_coding
ENST00000502584 (SEPT11-006) 76949751-77032158 protein_coding
ENST00000504460 (SEPT11-016) 77009780-77015017 processed_transcript
ENST00000504637 (SEPT11-008) 76949862-77011744 protein_coding
ENST00000505788 (SEPT11-002) 76949809-77040384 protein_coding
ENST00000506047 (SEPT11-003) 77014871-77021639 retained_intron
ENST00000506731 (SEPT11-015) 77020532-77039206 protein_coding
ENST00000510515 (SEPT11-004) 76949837-77034821 protein_coding
ENST00000510641 (SEPT11-005) 76949766-77030836 protein_coding
ENST00000512333 (SEPT11-011) 76987788-77011919 processed_transcript
ENST00000512575 (SEPT11-010) 76949836-77034667 processed_transcript
ENST00000512778 (SEPT11-009) 76985024-77011775 protein_coding
ENST00000513373 (SEPT11-013) 77030783-77040100 processed_transcript
ENST00000513697 (SEPT11-007) 77030897-77039326 processed_transcript
ENST00000515671 (SEPT11-014) 77034924-77040152 processed_transcript
ENSG00000234036 (TXNP6)
thioredoxin pseudogene 6
ENST00000510190 (TXNP6-001) 76958860-76959169 processed_pseudogene
CIL_00069X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058013-ENSMUSG00000063015 CGP 10090 5:93093457-93206495
GeneTranscriptPositionBiotype
ENSMUSG00000058013 (Sept11)
septin 11
ENSMUST00000074733 (Sept11-201) 93093457-93174958 protein_coding
ENSMUSG00000063015 (Ccni)
cyclin I
ENSMUST00000058550 (Ccni-001) 93181933-93206495 protein_coding
ENSMUST00000123033 (Ccni-004) 93187453-93188220 retained_intron
ENSMUST00000144514 (Ccni-002) 93189564-93206428 protein_coding
ENSMUST00000151568 (Ccni-003) 93187762-93205927 protein_coding
ENSMUSG00000083700 (Gm2986)
predicted gene 2986
ENSMUST00000121603 (Gm2986-001) 93195798-93196179 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069X_0001ENSG00000118816ENST00000237654ENST00000504697ENST00000505609ENST00000506614ENST00000507788ENST00000511943ENST00000513774ENST00000515468ENST00000515790ENSG00000138758ENST00000264893ENST00000502401ENST00000502584ENST00000504460ENST00000504637ENST00000505788ENST00000506047ENST00000506731ENST00000510515ENST00000510641ENST00000512333ENST00000512575ENST00000512778ENST00000513373ENST00000513697ENST00000515671ENSG00000234036ENST00000510190CIL_00069X_0002ENSMUSG00000058013ENSMUST00000074733ENSMUSG00000063015ENSMUST00000058550ENSMUST00000123033ENSMUST00000144514ENSMUST00000151568ENSMUSG00000083700ENSMUST00000121603
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069X_0001ENSG00000118816ENST00000237654ENST00000515468ENSG00000138758ENST00000264893ENST00000502584ENST00000505788ENST00000506731ENSG00000234036ENST00000510190CIL_00069X_0002ENSMUSG00000058013ENSMUST00000074733ENSMUSG00000063015ENSMUST00000058550ENSMUST00000123033ENSMUSG00000083700ENSMUST00000121603
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118816 ENST00000237654 219.442±0.00 118.246±0.00 15.111±0.00 98.729±71.49 81.406±61.86 132.384±113.12 62.298±49.38 70.218±57.48 27.155±2.59 95.701±81.71 59.436±45.01 89.129±76.44 54.641±7.08 127.544±92.92
ENST00000504697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.724±0.00 81.220±0.00 85.042±0.00
ENST00000515790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138758 ENST00000264893 21.153±0.00 7.161±0.00 3.078±0.00 6.709±2.48 19.624±8.74 9.760±0.96 2.988±1.56 26.763±0.00 4.454±0.96 10.269±2.50 1.205±0.71 6.777±2.55 16.272±4.20 6.036±4.01
ENST00000502401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502584 14.727±0.00 2.698±0.00 N/A 7.060±0.12 N/A 5.004±0.00 1.844±0.00 N/A N/A N/A 1.189±0.00 4.053±0.00 N/A 2.863±1.95
ENST00000504460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505788 N/A N/A N/A 6.399±0.38 N/A N/A N/A N/A N/A N/A 1.062±0.00 N/A N/A N/A
ENST00000506047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.641±0.00 31.659±0.00 2.382±0.00
ENST00000510515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234036 ENST00000510190 0.207±0.00 N/A 3.091±0.00 N/A N/A 2.422±0.00 N/A 0.201±0.00 0.036±0.00 3.344±0.00 N/A 0.132±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000058013 ENSMUST00000074733 18.843±4.78 2.967±0.82 8.113±1.39 30.285±18.26 17.133±5.22 8.538±0.92 5.289±0.40 22.019±3.54 6.648±4.48 23.208±1.69 4.512±1.05 19.517±8.03 24.852±12.15 0.799±0.26
ENSMUSG00000063015 ENSMUST00000058550 70.138±11.54 24.319±11.36 39.568±6.34 56.736±12.32 65.297±21.28 80.686±27.39 36.115±6.11 68.029±11.43 32.134±9.18 57.218±10.38 16.807±1.06 42.006±10.23 17.881±5.62 76.690±31.11
ENSMUST00000123033 N/A N/A N/A N/A 95.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083700 ENSMUST00000121603 0.467±0.14 0.844±0.22 N/A 1.800±0.93 0.378±0.09 0.910±1.09 N/A 0.261±0.18 0.501±0.23 0.564±0.26 0.298±0.12 0.753±0.34 0.503±0.25 0.699±0.23

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