C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006BC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003470-ENSDARG00000060763 CGP 7955 2:56873542-56945353
GeneTranscriptPositionBiotype
ENSDARG00000003470 (slc25a42)
solute carrier family 25, member 42 		ENSDART00000098562 (slc25a42-201) 56877968-56912362 protein_coding
ENSDART00000127004 (slc25a42-202) 56873542-56899021 protein_coding
ENSDART00000135328 (slc25a42-001) 56877964-56878572 protein_coding
ENSDARG00000060763 (ARMC6)
armadillo repeat containing 6 		ENSDART00000085964 (ARMC6-201) 56921908-56945353 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006BC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002346-ENSMUSG00000002343 CGP 10090 8:70184340-70234466
GeneTranscriptPositionBiotype
ENSMUSG00000002343 (Armc6)
armadillo repeat containing 6 		ENSMUST00000019679 (Armc6-001) 70220172-70234466 protein_coding
ENSMUST00000130319 (Armc6-004) 70225318-70234126 protein_coding
ENSMUST00000135931 (Armc6-002) 70224610-70234449 retained_intron
ENSMUST00000136666 (Armc6-006) 70220477-70222290 retained_intron
ENSMUST00000139765 (Armc6-005) 70220198-70222789 retained_intron
ENSMUST00000147387 (Armc6-003) 70223186-70225177 retained_intron
ENSMUSG00000002346 (Slc25a42)
solute carrier family 25, member 42 		ENSMUST00000063788 (Slc25a42-201) 70184340-70212256 protein_coding
ENSMUST00000110127 (Slc25a42-001) 70184340-70212305 protein_coding
ENSMUST00000134596 (Slc25a42-004) 70192369-70212305 retained_intron
ENSMUST00000139333 (Slc25a42-002) 70184340-70212305 retained_intron
ENSMUST00000150706 (Slc25a42-003) 70187716-70212305 retained_intron
ENSMUSG00000036054 (Sugp2)
SURP and G patch domain containing 2 		ENSMUST00000093458 (Sugp2-001) 70234233-70263105 protein_coding
ENSMUST00000126239 (Sugp2-005) 70257202-70264296 protein_coding
ENSMUST00000129402 (Sugp2-006) 70273592-70279914 processed_transcript
ENSMUST00000130492 (Sugp2-011) 70257476-70259403 retained_intron
ENSMUST00000131489 (Sugp2-002) 70234226-70263105 nonsense_mediated_decay
ENSMUST00000133924 (Sugp2-012) 70259752-70263105 processed_transcript
ENSMUST00000135640 (Sugp2-010) 70248144-70251868 retained_intron
ENSMUST00000136391 (Sugp2-013) 70260442-70263105 retained_intron
ENSMUST00000136758 (Sugp2-003) 70234623-70254763 retained_intron
ENSMUST00000145078 (Sugp2-009) 70234617-70242651 protein_coding
ENSMUST00000148378 (Sugp2-007) 70252064-70279915 processed_transcript
ENSMUST00000155771 (Sugp2-008) 70236388-70242903 protein_coding
ENSMUST00000156330 (Sugp2-004) 70243584-70258270 retained_intron
ENSMUST00000164403 (Sugp2-201) 70234226-70261042 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BC_0001ENSDARG00000003470ENSDART00000098562ENSDART00000127004ENSDART00000135328ENSDARG00000060763ENSDART00000085964CIL_0006BC_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BC_0001ENSDARG00000003470ENSDART00000098562ENSDART00000127004ENSDARG00000060763ENSDART00000085964CIL_0006BC_0002ENSMUSG00000002343ENSMUST00000019679ENSMUST00000136666ENSMUSG00000002346ENSMUST00000063788ENSMUST00000110127ENSMUST00000134596ENSMUST00000139333ENSMUST00000150706ENSMUSG00000036054ENSMUST00000093458ENSMUST00000126239ENSMUST00000131489
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003470 ENSDART00000098562 N/A N/A N/A N/A N/A N/A N/A N/A 2.429±0.00 N/A N/A N/A N/A N/A
ENSDART00000127004 N/A N/A N/A 2.240±0.40 N/A N/A 9.144±5.15 7.708±1.52 1.416±0.00 N/A 1.973±0.00 N/A N/A N/A
ENSDART00000135328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000060763 ENSDART00000085964 N/A N/A N/A 7.685±0.00 N/A N/A 0.158±0.00 N/A 0.467±0.00 N/A 1.188±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002343 ENSMUST00000019679 9.824±1.68 10.133±1.75 N/A 25.960±3.50 6.623±0.26 7.491±0.86 3.487±0.60 5.176±0.65 5.969±2.89 6.530±0.86 N/A 13.037±1.13 7.847±2.65 N/A
ENSMUST00000130319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.449±9.92 N/A
ENSMUST00000139765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000002346 ENSMUST00000063788 11.047±6.13 17.320±2.69 1.378±0.27 1.230±0.00 6.172±2.60 6.089±2.27 14.505±2.89 19.313±6.17 14.775±6.23 3.466±0.78 3.633±0.94 5.677±2.79 1.888±2.26 1.281±0.49
ENSMUST00000110127 4.816±0.64 5.042±0.00 2.743±1.17 2.256±0.00 6.171±2.30 2.603±1.03 14.368±3.78 18.198±6.57 11.594±4.78 4.721±0.42 9.525±2.24 11.668±3.60 0.915±0.51 1.531±0.74
ENSMUST00000134596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.439±0.00 0.106±0.00 N/A
ENSMUST00000139333 4.912±2.27 17.910±1.63 1.890±0.43 3.504±1.40 7.296±1.35 4.272±1.46 8.553±0.95 10.810±3.58 11.913±7.25 4.183±1.03 1.945±0.24 13.350±7.83 0.344±0.27 N/A
ENSMUST00000150706 2.820±0.00 N/A 2.110±0.00 1.278±0.00 N/A 2.386±0.00 N/A N/A N/A N/A N/A N/A 0.480±0.32 1.615±0.00
ENSMUSG00000036054 ENSMUST00000093458 N/A N/A N/A 13.597±2.47 N/A N/A 2.954±0.41 N/A N/A N/A 8.231±0.71 6.206±0.00 3.070±0.99 65.934±17.20
ENSMUST00000126239 2.991±0.00 N/A 4.520±0.00 11.214±0.83 3.314±0.43 2.321±0.19 1.917±0.52 1.246±0.19 1.729±0.49 2.344±0.08 N/A 4.019±1.19 N/A N/A
ENSMUST00000129402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131489 10.510±1.11 10.749±1.56 12.953±2.69 24.111±5.74 9.186±1.23 6.559±0.52 2.867±0.17 3.720±0.47 4.550±2.09 7.803±0.84 N/A 12.028±3.03 5.004±1.93 N/A
ENSMUST00000133924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading