C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006C0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005274-ENSDARG00000078992 CGP 7955 25:21769145-21827148
GeneTranscriptPositionBiotype
ENSDARG00000078992 (wnk1a)
WNK lysine deficient protein kinase 1a 		ENSDART00000086631 (wnk1a-201) 21785803-21824528 protein_coding
ENSDART00000156257 (wnk1a-001) 21785141-21827148 protein_coding
CIL_0006C0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030166-ENSMUSG00000045962 CGP 10090 6:119902698-120038672
GeneTranscriptPositionBiotype
ENSMUSG00000030166 (Rad52)
RAD52 homolog (S. cerevisiae) 		ENSMUST00000032269 (Rad52-201) 119902698-119922823 protein_coding
ENSMUST00000159291 (Rad52-007) 119902734-119919168 processed_transcript
ENSMUST00000159356 (Rad52-006) 119902705-119913097 processed_transcript
ENSMUST00000160558 (Rad52-012) 119913951-119918786 retained_intron
ENSMUST00000160877 (Rad52-005) 119902705-119913724 processed_transcript
ENSMUST00000161045 (Rad52-002) 119902703-119922828 nonsense_mediated_decay
ENSMUST00000161816 (Rad52-003) 119902728-119921315 retained_intron
ENSMUST00000161860 (Rad52-008) 119913238-119914218 processed_transcript
ENSMUST00000162009 (Rad52-010) 119915252-119918931 processed_transcript
ENSMUST00000162205 (Rad52-004) 119902698-119915335 processed_transcript
ENSMUST00000162255 (Rad52-009) 119902734-119919168 processed_transcript
ENSMUST00000162461 (Rad52-001) 119902703-119922823 protein_coding
ENSMUST00000162590 (Rad52-011) 119902739-119920813 retained_intron
ENSMUSG00000089936 (Gm16199)
predicted gene 16199 		ENSMUST00000160032 (Gm16199-001) 120005998-120006285 processed_pseudogene
ENSMUSG00000097531 (Gm26591)
predicted gene, 26591 		ENSMUST00000181872 (Gm26591-201) 120033522-120036471 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006C0_0001ENSDARG00000078992ENSDART00000086631ENSDART00000156257CIL_0006C0_0002ENSMUSG00000030166ENSMUST00000032269ENSMUST00000159291ENSMUST00000159356ENSMUST00000160558ENSMUST00000160877ENSMUST00000161045ENSMUST00000161816ENSMUST00000161860ENSMUST00000162009ENSMUST00000162205ENSMUST00000162255ENSMUST00000162461ENSMUST00000162590ENSMUSG00000089936ENSMUST00000160032ENSMUSG00000097531ENSMUST00000181872
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006C0_0001ENSDARG00000078992ENSDART00000086631ENSDART00000156257CIL_0006C0_0002ENSMUSG00000030166ENSMUST00000032269ENSMUST00000159291ENSMUST00000160877ENSMUST00000161045ENSMUST00000161816ENSMUST00000162009ENSMUST00000162255ENSMUST00000162461ENSMUST00000162590ENSMUSG00000089936ENSMUST00000160032ENSMUSG00000097531ENSMUST00000181872
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000078992 ENSDART00000086631 N/A N/A N/A 6.837±3.84 N/A N/A 4.074±1.06 7.559±1.78 0.620±0.00 N/A 1.772±0.00 N/A N/A N/A
ENSDART00000156257 N/A N/A N/A 4.169±1.04 N/A N/A 1.093±1.10 1.751±1.51 0.340±0.00 N/A 0.521±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030166 ENSMUST00000032269 N/A N/A N/A N/A N/A N/A N/A 0.445±0.00 1.258±0.00 0.973±0.00 0.838±0.00 2.238±0.00 1.510±0.00 N/A
ENSMUST00000159291 N/A 2.451±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160877 5.688±1.80 8.316±3.96 N/A 3.664±0.68 7.976±3.37 5.512±1.78 1.135±0.07 2.348±0.73 1.277±0.14 5.902±1.73 N/A 11.089±3.30 N/A N/A
ENSMUST00000161045 1.904±0.00 1.948±0.58 2.910±0.57 4.452±0.16 3.188±0.00 1.491±0.00 0.835±0.00 1.032±0.00 2.406±0.00 2.212±0.48 N/A 2.989±0.81 2.087±0.04 2.637±0.74
ENSMUST00000161816 2.647±0.27 2.824±0.54 N/A 3.691±0.57 2.105±0.20 2.118±0.57 1.179±0.13 1.600±0.30 1.709±0.68 2.897±0.27 0.709±0.15 3.412±1.19 3.110±1.03 0.886±0.00
ENSMUST00000161860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162009 N/A N/A N/A 27.933±0.00 N/A N/A N/A N/A N/A N/A N/A 25.498±0.00 23.086±8.06 N/A
ENSMUST00000162205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162255 N/A N/A N/A N/A 3.554±0.00 3.800±0.00 1.140±0.00 1.485±0.34 N/A 2.886±0.28 N/A 6.150±0.14 N/A N/A
ENSMUST00000162461 2.502±0.24 N/A 2.218±0.29 N/A 2.101±0.70 2.183±0.42 N/A 1.466±0.10 2.544±1.33 2.001±0.00 1.015±0.34 3.990±1.06 3.334±0.55 N/A
ENSMUST00000162590 N/A 2.532±0.86 N/A 9.717±0.31 4.275±0.40 4.086±0.88 1.568±0.22 2.673±0.61 3.020±1.76 4.116±0.81 N/A 6.581±0.33 N/A 2.112±0.00
ENSMUSG00000089936 ENSMUST00000160032 N/A N/A N/A 0.200±0.00 N/A N/A N/A N/A 1.039±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097531 ENSMUST00000181872 0.349±0.22 0.281±0.17 0.107±0.01 0.239±0.02 0.654±0.29 0.624±0.24 0.196±0.08 0.245±0.07 0.241±0.11 0.532±0.20 0.016±0.01 0.845±0.44 0.181±0.17 0.220±0.09

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