C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006C3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063524-ENSDARG00000059043 CGP 7955 4:4145420-4304686
GeneTranscriptPositionBiotype
ENSDARG00000059043 (ntf3)
neurotrophin 3 		ENSDART00000082046 (ntf3-001) 4270214-4304686 protein_coding
ENSDARG00000063524 (ano2)
anoctamin 2 		ENSDART00000092932 (ano2-001) 4145677-4228500 protein_coding
ENSDART00000109788 (ano2-201) 4145420-4231651 protein_coding
ENSDART00000150843 (ano2-002) 4145677-4172661 protein_coding
ENSDARG00000095042 (si:dkey-224k5.12)
si:dkey-224k5.12 		ENSDART00000135048 (si:dkey-224k5.12-001) 4188247-4200844 antisense
CIL_0006C3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038115-ENSMUSG00000049107 CGP 10090 6:125690419-126166744
GeneTranscriptPositionBiotype
ENSMUSG00000038115 (Ano2)
anoctamin 2 		ENSMUST00000159111 (Ano2-003) 125690419-125957021 retained_intron
ENSMUST00000159984 (Ano2-004) 125815535-126040124 nonsense_mediated_decay
ENSMUST00000160317 (Ano2-006) 125815534-125903085 processed_transcript
ENSMUST00000160496 (Ano2-001) 125690419-126040126 protein_coding
ENSMUST00000161293 (Ano2-005) 125711476-125793607 protein_coding
ENSMUST00000161619 (Ano2-002) 125710626-126040126 nonsense_mediated_decay
ENSMUSG00000049107 (Ntf3)
neurotrophin 3 		ENSMUST00000050484 (Ntf3-201) 126101413-126166744 protein_coding
ENSMUST00000112244 (Ntf3-202) 126101413-126166744 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006C3_0001ENSDARG00000059043ENSDART00000082046ENSDARG00000063524ENSDART00000092932ENSDART00000109788ENSDART00000150843ENSDARG00000095042ENSDART00000135048CIL_0006C3_0002ENSMUSG00000038115ENSMUST00000159111ENSMUST00000159984ENSMUST00000160317ENSMUST00000160496ENSMUST00000161293ENSMUST00000161619ENSMUSG00000049107ENSMUST00000050484ENSMUST00000112244
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006C3_0001ENSDARG00000059043ENSDART00000082046ENSDARG00000063524ENSDART00000092932ENSDART00000109788ENSDARG00000095042ENSDART00000135048CIL_0006C3_0002ENSMUSG00000038115ENSMUST00000159111ENSMUST00000159984ENSMUST00000160317ENSMUST00000160496ENSMUST00000161293ENSMUST00000161619ENSMUSG00000049107ENSMUST00000050484ENSMUST00000112244
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059043 ENSDART00000082046 N/A N/A N/A 0.176±0.01 N/A N/A 0.997±0.50 0.362±0.00 N/A N/A 0.376±0.00 N/A N/A N/A
ENSDARG00000063524 ENSDART00000092932 N/A N/A N/A 5.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000109788 N/A N/A N/A 5.408±4.61 N/A N/A 0.406±0.41 0.056±0.04 0.071±0.00 N/A 0.603±0.00 N/A N/A N/A
ENSDART00000150843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000095042 ENSDART00000135048 N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038115 ENSMUST00000159111 N/A 0.056±0.03 N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A 0.043±0.00 N/A N/A
ENSMUST00000159984 0.011±0.00 N/A 0.043±0.04 N/A 0.099±0.04 0.352±0.18 0.027±0.01 0.054±0.05 0.023±0.01 0.025±0.01 0.019±0.00 0.179±0.16 0.088±0.00 2.376±1.07
ENSMUST00000160317 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.163±0.09 0.901±0.09 2.381±0.00
ENSMUST00000160496 N/A N/A 0.017±0.00 0.269±0.33 N/A 0.214±0.04 N/A 0.035±0.02 0.026±0.00 0.058±0.02 N/A 0.170±0.12 N/A 0.245±0.13
ENSMUST00000161293 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.323±0.00 N/A 0.196±0.08 N/A N/A
ENSMUST00000161619 N/A N/A N/A 0.234±0.22 N/A 0.216±0.15 N/A N/A N/A 0.156±0.00 N/A N/A 0.209±0.04 N/A
ENSMUSG00000049107 ENSMUST00000050484 N/A 0.244±0.00 0.855±0.00 0.698±0.00 0.598±0.35 0.658±0.00 0.195±0.00 N/A 0.159±0.15 0.327±0.11 0.356±0.09 0.525±0.34 0.144±0.10 0.196±0.07
ENSMUST00000112244 0.599±0.04 0.446±0.17 5.098±3.16 0.221±0.00 0.534±0.16 N/A 0.395±0.20 1.682±0.00 0.071±0.03 0.893±0.08 0.671±0.13 1.057±0.32 0.184±0.09 0.216±0.00

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