C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006D0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166847-ENSG00000166851 CGP 9606 16:23641392-23690367
GeneTranscriptPositionBiotype
ENSG00000134398 (ERN2)
endoplasmic reticulum to nucleus signaling 2 		ENST00000256797 (ERN2-001) 23690376-23713500 protein_coding
ENST00000457008 (ERN2-002) 23690326-23713226 protein_coding
ENST00000561478 (ERN2-008) 23706807-23707363 retained_intron
ENST00000562458 (ERN2-006) 23690638-23694760 nonsense_mediated_decay
ENST00000562562 (ERN2-003) 23694854-23713222 nonsense_mediated_decay
ENST00000566565 (ERN2-007) 23706220-23706854 retained_intron
ENST00000569903 (ERN2-004) 23709604-23713210 nonsense_mediated_decay
ENSG00000166847 (DCTN5)
dynactin 5 (p25) 		ENST00000300087 (DCTN5-001) 23641392-23677455 protein_coding
ENST00000563188 (DCTN5-006) 23641513-23665693 nonsense_mediated_decay
ENST00000563614 (DCTN5-002) 23666468-23669872 retained_intron
ENST00000563998 (DCTN5-009) 23641471-23667371 protein_coding
ENST00000566053 (DCTN5-008) 23641476-23667218 nonsense_mediated_decay
ENST00000566298 (DCTN5-004) 23642587-23665701 protein_coding
ENST00000568272 (DCTN5-003) 23641529-23651147 protein_coding
ENST00000568589 (DCTN5-005) 23641511-23666017 protein_coding
ENSG00000166851 (PLK1)
polo-like kinase 1 		ENST00000300093 (PLK1-001) 23678822-23690367 protein_coding
ENST00000562272 (PLK1-002) 23677656-23690366 retained_intron
ENST00000562407 (PLK1-003) 23683902-23687820 retained_intron
ENST00000564202 (PLK1-006) 23678971-23681054 processed_transcript
ENST00000564794 (PLK1-010) 23688676-23690038 retained_intron
ENST00000564947 (PLK1-005) 23687137-23688732 retained_intron
ENST00000567897 (PLK1-007) 23679583-23684089 protein_coding
ENST00000568568 (PLK1-008) 23679732-23683948 protein_coding
ENST00000570220 (PLK1-004) 23678869-23681022 nonsense_mediated_decay
ENSG00000261266 (CTD-2196E14.5)
 ENST00000566143 (CTD-2196E14.5-001) 23687049-23687689 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006D0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030868-ENSMUSG00000030867 CGP 10090 7:122133041-122169875
GeneTranscriptPositionBiotype
ENSMUSG00000030867 (Plk1)
polo-like kinase 1 		ENSMUST00000033154 (Plk1-201) 122159437-122169875 protein_coding
ENSMUSG00000030868 (Dctn5)
dynactin 5 		ENSMUST00000033156 (Dctn5-001) 122133041-122149044 protein_coding
ENSMUST00000123602 (Dctn5-002) 122133054-122149044 retained_intron
ENSMUST00000176193 (Dctn5-003) 122133072-122135134 nonsense_mediated_decay
ENSMUST00000176295 (Dctn5-004) 122143809-122148581 nonsense_mediated_decay
ENSMUSG00000086942 (Gm15489)
predicted gene 15489 		ENSMUST00000132811 (Gm15489-001) 122139008-122159401 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D0_0001ENSG00000134398ENST00000256797ENST00000457008ENST00000561478ENST00000562458ENST00000562562ENST00000566565ENST00000569903ENSG00000166847ENST00000300087ENST00000563188ENST00000563614ENST00000563998ENST00000566053ENST00000566298ENST00000568272ENST00000568589ENSG00000166851ENST00000300093ENST00000562272ENST00000562407ENST00000564202ENST00000564794ENST00000564947ENST00000567897ENST00000568568ENST00000570220ENSG00000261266ENST00000566143CIL_0006D0_0002ENSMUSG00000030867ENSMUST00000033154ENSMUSG00000030868ENSMUST00000033156ENSMUST00000123602ENSMUST00000176193ENSMUST00000176295ENSMUSG00000086942ENSMUST00000132811
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D0_0001ENSG00000134398ENST00000256797ENST00000457008ENST00000562458ENST00000569903ENSG00000166847ENST00000300087ENST00000563614ENST00000563998ENST00000568589ENSG00000166851ENST00000300093ENST00000562272ENST00000564202ENST00000564794ENST00000567897ENST00000568568ENST00000570220ENSG00000261266ENST00000566143CIL_0006D0_0002ENSMUSG00000030867ENSMUST00000033154ENSMUSG00000030868ENSMUST00000033156ENSMUST00000123602ENSMUSG00000086942ENSMUST00000132811
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134398 ENST00000256797 0.059±0.00 N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A 0.305±0.00 N/A 2.921±1.82 N/A N/A
ENST00000457008 0.093±0.00 0.281±0.00 N/A 0.324±0.00 1.784±0.00 1.800±0.45 N/A 0.476±0.00 N/A 0.721±0.00 0.183±0.00 0.894±0.22 N/A N/A
ENST00000561478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562458 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 0.264±0.00 N/A N/A N/A
ENST00000562562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569903 N/A N/A N/A N/A N/A 6.668±0.00 0.224±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000166847 ENST00000300087 0.800±0.00 1.042±0.00 1.080±0.00 5.902±0.87 1.793±0.11 1.819±0.00 0.492±0.06 2.266±0.00 0.669±0.31 0.633±0.07 N/A 1.723±1.04 1.657±0.34 3.407±1.24
ENST00000563188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563614 6.500±0.00 6.801±0.00 1.475±0.00 N/A 5.036±0.42 5.442±1.21 2.650±1.10 5.734±4.68 3.163±0.29 3.735±1.18 1.842±0.70 5.124±1.39 9.482±2.85 6.335±0.00
ENST00000563998 N/A N/A 3.995±0.00 N/A N/A N/A 3.530±0.61 N/A N/A 6.695±0.00 N/A N/A 11.483±0.00 N/A
ENST00000566053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568589 N/A N/A N/A N/A N/A N/A N/A 2.554±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000166851 ENST00000300093 0.259±0.00 N/A N/A N/A 0.266±0.00 N/A 0.210±0.00 N/A 0.101±0.00 0.360±0.00 N/A 5.157±5.85 7.005±2.37 24.730±3.24
ENST00000562272 0.077±0.00 0.344±0.00 0.076±0.00 0.664±0.00 N/A N/A N/A 0.500±0.00 0.040±0.00 N/A N/A 0.488±0.00 N/A N/A
ENST00000562407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564202 N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000564794 N/A 1.490±0.00 N/A 1.200±0.00 N/A N/A N/A N/A 0.442±0.00 N/A N/A 21.786±0.00 9.175±0.00 35.441±0.00
ENST00000564947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567897 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.963±0.00 N/A N/A N/A N/A
ENST00000568568 N/A N/A N/A 0.191±0.00 0.800±0.00 N/A N/A 0.338±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570220 N/A N/A N/A 0.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261266 ENST00000566143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.298±0.00 N/A 4.958±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030867 ENSMUST00000033154 2.762±1.90 0.613±0.31 1.283±0.09 8.847±5.98 1.016±0.55 15.620±2.79 0.290±0.04 0.290±0.18 21.726±26.02 1.096±0.16 0.106±0.05 8.302±3.02 18.641±13.24 22.551±5.23
ENSMUSG00000030868 ENSMUST00000033156 42.682±3.22 23.496±4.33 23.654±0.35 36.127±7.03 37.728±8.27 30.845±3.25 14.474±0.92 34.472±2.20 20.868±3.47 24.559±0.60 7.416±0.83 32.973±9.62 31.086±5.83 15.961±4.04
ENSMUST00000123602 5.727±1.46 6.810±1.27 6.911±1.91 8.523±1.90 8.869±1.84 9.280±1.80 2.745±0.87 2.948±0.48 4.714±2.02 10.068±1.03 0.933±0.12 10.944±3.44 4.765±0.50 1.650±0.15
ENSMUST00000176193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086942 ENSMUST00000132811 0.153±0.08 0.084±0.02 0.155±0.01 0.213±0.06 0.133±0.06 0.115±0.03 0.047±0.02 0.101±0.03 0.305±0.21 0.108±0.04 0.084±0.06 0.192±0.06 0.159±0.05 1.085±0.75

Loading