C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006D0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166847-ENSG00000166851 CGP 9606 16:23641392-23690367
GeneTranscriptPositionBiotype
ENSG00000134398 (ERN2)
endoplasmic reticulum to nucleus signaling 2 		ENST00000256797 (ERN2-001) 23690376-23713500 protein_coding
ENST00000457008 (ERN2-002) 23690326-23713226 protein_coding
ENST00000561478 (ERN2-008) 23706807-23707363 retained_intron
ENST00000562458 (ERN2-006) 23690638-23694760 nonsense_mediated_decay
ENST00000562562 (ERN2-003) 23694854-23713222 nonsense_mediated_decay
ENST00000566565 (ERN2-007) 23706220-23706854 retained_intron
ENST00000569903 (ERN2-004) 23709604-23713210 nonsense_mediated_decay
ENSG00000166847 (DCTN5)
dynactin 5 (p25) 		ENST00000300087 (DCTN5-001) 23641392-23677455 protein_coding
ENST00000563188 (DCTN5-006) 23641513-23665693 nonsense_mediated_decay
ENST00000563614 (DCTN5-002) 23666468-23669872 retained_intron
ENST00000563998 (DCTN5-009) 23641471-23667371 protein_coding
ENST00000566053 (DCTN5-008) 23641476-23667218 nonsense_mediated_decay
ENST00000566298 (DCTN5-004) 23642587-23665701 protein_coding
ENST00000568272 (DCTN5-003) 23641529-23651147 protein_coding
ENST00000568589 (DCTN5-005) 23641511-23666017 protein_coding
ENSG00000166851 (PLK1)
polo-like kinase 1 		ENST00000300093 (PLK1-001) 23678822-23690367 protein_coding
ENST00000562272 (PLK1-002) 23677656-23690366 retained_intron
ENST00000562407 (PLK1-003) 23683902-23687820 retained_intron
ENST00000564202 (PLK1-006) 23678971-23681054 processed_transcript
ENST00000564794 (PLK1-010) 23688676-23690038 retained_intron
ENST00000564947 (PLK1-005) 23687137-23688732 retained_intron
ENST00000567897 (PLK1-007) 23679583-23684089 protein_coding
ENST00000568568 (PLK1-008) 23679732-23683948 protein_coding
ENST00000570220 (PLK1-004) 23678869-23681022 nonsense_mediated_decay
ENSG00000261266 (CTD-2196E14.5)
 ENST00000566143 (CTD-2196E14.5-001) 23687049-23687689 antisense
CIL_0006D0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030868-ENSMUSG00000030867 CGP 10090 7:122133041-122169875
GeneTranscriptPositionBiotype
ENSMUSG00000030867 (Plk1)
polo-like kinase 1 		ENSMUST00000033154 (Plk1-201) 122159437-122169875 protein_coding
ENSMUSG00000030868 (Dctn5)
dynactin 5 		ENSMUST00000033156 (Dctn5-001) 122133041-122149044 protein_coding
ENSMUST00000123602 (Dctn5-002) 122133054-122149044 retained_intron
ENSMUST00000176193 (Dctn5-003) 122133072-122135134 nonsense_mediated_decay
ENSMUST00000176295 (Dctn5-004) 122143809-122148581 nonsense_mediated_decay
ENSMUSG00000086942 (Gm15489)
predicted gene 15489 		ENSMUST00000132811 (Gm15489-001) 122139008-122159401 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D0_0001ENSG00000134398ENST00000256797ENST00000457008ENST00000561478ENST00000562458ENST00000562562ENST00000566565ENST00000569903ENSG00000166847ENST00000300087ENST00000563188ENST00000563614ENST00000563998ENST00000566053ENST00000566298ENST00000568272ENST00000568589ENSG00000166851ENST00000300093ENST00000562272ENST00000562407ENST00000564202ENST00000564794ENST00000564947ENST00000567897ENST00000568568ENST00000570220ENSG00000261266ENST00000566143CIL_0006D0_0002ENSMUSG00000030867ENSMUST00000033154ENSMUSG00000030868ENSMUST00000033156ENSMUST00000123602ENSMUST00000176193ENSMUST00000176295ENSMUSG00000086942ENSMUST00000132811
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D0_0001ENSG00000134398ENST00000256797ENST00000457008ENST00000562458ENST00000569903ENSG00000166847ENST00000300087ENST00000563614ENST00000563998ENST00000568589ENSG00000166851ENST00000300093ENST00000562272ENST00000564202ENST00000564794ENST00000567897ENST00000568568ENST00000570220ENSG00000261266ENST00000566143CIL_0006D0_0002ENSMUSG00000030867ENSMUST00000033154ENSMUSG00000030868ENSMUST00000033156ENSMUST00000123602ENSMUSG00000086942ENSMUST00000132811
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134398 ENST00000256797 0.059±0.00 N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A 0.305±0.00 N/A 2.921±1.82 N/A N/A
ENST00000457008 0.093±0.00 0.281±0.00 N/A 0.324±0.00 1.784±0.00 1.800±0.45 N/A 0.476±0.00 N/A 0.721±0.00 0.183±0.00 0.894±0.22 N/A N/A
ENST00000561478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562458 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 0.264±0.00 N/A N/A N/A
ENST00000562562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569903 N/A N/A N/A N/A N/A 6.668±0.00 0.224±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000166847 ENST00000300087 0.800±0.00 1.042±0.00 1.080±0.00 5.902±0.87 1.793±0.11 1.819±0.00 0.492±0.06 2.266±0.00 0.669±0.31 0.633±0.07 N/A 1.723±1.04 1.657±0.34 3.407±1.24
ENST00000563188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563614 6.500±0.00 6.801±0.00 1.475±0.00 N/A 5.036±0.42 5.442±1.21 2.650±1.10 5.734±4.68 3.163±0.29 3.735±1.18 1.842±0.70 5.124±1.39 9.482±2.85 6.335±0.00
ENST00000563998 N/A N/A 3.995±0.00 N/A N/A N/A 3.530±0.61 N/A N/A 6.695±0.00 N/A N/A 11.483±0.00 N/A
ENST00000566053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568589 N/A N/A N/A N/A N/A N/A N/A 2.554±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000166851 ENST00000300093 0.259±0.00 N/A N/A N/A 0.266±0.00 N/A 0.210±0.00 N/A 0.101±0.00 0.360±0.00 N/A 5.157±5.85 7.005±2.37 24.730±3.24
ENST00000562272 0.077±0.00 0.344±0.00 0.076±0.00 0.664±0.00 N/A N/A N/A 0.500±0.00 0.040±0.00 N/A N/A 0.488±0.00 N/A N/A
ENST00000562407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564202 N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000564794 N/A 1.490±0.00 N/A 1.200±0.00 N/A N/A N/A N/A 0.442±0.00 N/A N/A 21.786±0.00 9.175±0.00 35.441±0.00
ENST00000564947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567897 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.963±0.00 N/A N/A N/A N/A
ENST00000568568 N/A N/A N/A 0.191±0.00 0.800±0.00 N/A N/A 0.338±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570220 N/A N/A N/A 0.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261266 ENST00000566143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.298±0.00 N/A 4.958±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030867 ENSMUST00000033154 2.762±1.90 0.613±0.31 1.283±0.09 8.847±5.98 1.016±0.55 15.620±2.79 0.290±0.04 0.290±0.18 21.726±26.02 1.096±0.16 0.106±0.05 8.302±3.02 18.641±13.24 22.551±5.23
ENSMUSG00000030868 ENSMUST00000033156 42.682±3.22 23.496±4.33 23.654±0.35 36.127±7.03 37.728±8.27 30.845±3.25 14.474±0.92 34.472±2.20 20.868±3.47 24.559±0.60 7.416±0.83 32.973±9.62 31.086±5.83 15.961±4.04
ENSMUST00000123602 5.727±1.46 6.810±1.27 6.911±1.91 8.523±1.90 8.869±1.84 9.280±1.80 2.745±0.87 2.948±0.48 4.714±2.02 10.068±1.03 0.933±0.12 10.944±3.44 4.765±0.50 1.650±0.15
ENSMUST00000176193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086942 ENSMUST00000132811 0.153±0.08 0.084±0.02 0.155±0.01 0.213±0.06 0.133±0.06 0.115±0.03 0.047±0.02 0.101±0.03 0.305±0.21 0.108±0.04 0.084±0.06 0.192±0.06 0.159±0.05 1.085±0.75

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