C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006EK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002968-ENSDARG00000031702 CGP 7955 12:6843942-7135375
GeneTranscriptPositionBiotype
ENSDARG00000002968 (a1cf)
apobec1 complementation factor 		ENSDART00000010358 (a1cf-201) 6844617-6855650 protein_coding
ENSDART00000152292 (a1cf-001) 6843942-6861390 protein_coding
ENSDARG00000031702 (prkg1b)
protein kinase, cGMP-dependent, type Ib 		ENSDART00000043236 (prkg1b-201) 6897537-7134602 protein_coding
ENSDART00000152616 (prkg1b-002) 7128433-7131583 retained_intron
ENSDART00000152765 (prkg1b-001) 7075009-7135375 protein_coding
ENSDARG00000096542 (si:dkey-31k12.2)
si:dkey-31k12.2 		ENSDART00000152646 (si:dkey-31k12.2-001) 7074798-7176794 antisense
ENSDARG00000096552 (si:ch211-215l11.8)
si:ch211-215l11.8 		ENSDART00000152667 (si:ch211-215l11.8-001) 6878695-6901211 lincRNA
CIL_0006EK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148584-ENSG00000185532 CGP 9606 10:50799409-52298350
GeneTranscriptPositionBiotype
ENSG00000177613 (CSTF2T)
cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant 		ENST00000331173 (CSTF2T-001) 51695487-51699591 protein_coding
ENSG00000185532 (PRKG1)
protein kinase, cGMP-dependent, type I 		ENST00000373975 (PRKG1-005) 52046777-52294176 protein_coding
ENST00000373976 (PRKG1-004) 51153279-52062862 protein_coding
ENST00000373980 (PRKG1-002) 51074174-52298350 protein_coding
ENST00000373985 (PRKG1-001) 50991358-52298350 protein_coding
ENST00000401604 (PRKG1-201) 51804580-52298348 protein_coding
ENSG00000213659 (RSU1P3)
Ras suppressor protein 1 pseudogene 3 		ENST00000412878 (RSU1P3-001) 51319826-51320660 processed_pseudogene
ENSG00000216022 (AC068062.1)
 ENST00000401203 (AC068062.1-201) 51639743-51639832 miRNA
ENSG00000223502 (RP11-96B5.3)
 ENST00000343087 (RP11-96B5.3-001) 51062579-51068553 antisense
ENSG00000231132 (RP11-40C11.2)
 ENST00000435271 (RP11-40C11.2-001) 51244894-51245806 antisense
ENSG00000235279 (RP11-539E19.2)
 ENST00000419889 (RP11-539E19.2-001) 51302566-51306709 sense_intronic
ENSG00000261368 (RP11-96B5.4)
 ENST00000561565 (RP11-96B5.4-001) 50964270-50965220 lincRNA
ENSG00000278260 (AL157399.1)
 ENST00000621541 (AL157399.1-201) 51526341-51526433 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EK_0001ENSDARG00000002968ENSDART00000010358ENSDART00000152292ENSDARG00000031702ENSDART00000043236ENSDART00000152616ENSDART00000152765ENSDARG00000096542ENSDART00000152646ENSDARG00000096552ENSDART00000152667CIL_0006EK_0002ENSG00000177613ENST00000331173ENSG00000185532ENST00000373975ENST00000373976ENST00000373980ENST00000373985ENST00000401604ENSG00000213659ENST00000412878ENSG00000216022ENST00000401203ENSG00000223502ENST00000343087ENSG00000231132ENST00000435271ENSG00000235279ENST00000419889ENSG00000261368ENST00000561565ENSG00000278260ENST00000621541
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EK_0001ENSDARG00000002968ENSDART00000010358ENSDART00000152292ENSDARG00000031702ENSDART00000043236ENSDART00000152616ENSDART00000152765ENSDARG00000096542ENSDART00000152646ENSDARG00000096552ENSDART00000152667CIL_0006EK_0002ENSG00000177613ENST00000331173ENSG00000185532ENST00000373975ENST00000373980ENST00000373985ENST00000401604ENSG00000213659ENST00000412878ENSG00000216022ENST00000401203ENSG00000223502ENST00000343087ENSG00000231132ENST00000435271ENSG00000235279ENST00000419889ENSG00000261368ENST00000561565ENSG00000278260ENST00000621541
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002968 ENSDART00000010358 N/A N/A N/A 0.191±0.08 N/A N/A 0.517±0.25 20.239±0.00 7.386±0.00 N/A 0.422±0.00 N/A N/A N/A
ENSDART00000152292 N/A N/A N/A 0.043±0.01 N/A N/A 0.201±0.09 3.413±0.30 9.845±0.00 N/A 0.327±0.00 N/A N/A N/A
ENSDARG00000031702 ENSDART00000043236 N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A
ENSDART00000152616 N/A N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A
ENSDART00000152765 N/A N/A N/A 0.338±0.00 N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A
ENSDARG00000096542 ENSDART00000152646 N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096552 ENSDART00000152667 N/A N/A N/A 0.176±0.00 N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177613 ENST00000331173 4.957±0.00 6.443±0.00 2.341±0.00 4.945±0.53 4.416±1.41 3.302±0.40 4.143±1.97 4.366±2.02 4.012±1.22 3.511±0.00 2.946±1.55 6.283±3.62 6.391±2.17 7.811±0.91
ENSG00000185532 ENST00000373975 N/A N/A 0.629±0.00 N/A N/A N/A N/A 0.098±0.00 N/A N/A 2.238±0.00 N/A N/A 1.163±0.00
ENST00000373976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373980 0.432±0.00 1.577±0.00 0.244±0.00 1.450±0.41 0.442±0.00 1.168±0.23 1.291±0.46 0.349±0.00 5.285±0.00 0.830±0.00 1.583±0.00 0.477±0.13 0.605±0.40 1.517±0.75
ENST00000373985 1.417±0.00 1.239±0.00 0.373±0.00 N/A 1.140±0.00 1.511±0.31 3.291±0.00 0.725±0.61 0.550±0.50 3.259±0.61 1.289±0.00 0.503±0.03 1.241±0.24 1.024±0.00
ENST00000401604 N/A N/A N/A N/A 1.151±0.64 2.492±0.00 1.234±0.00 N/A 0.080±0.00 0.862±0.00 N/A 0.984±0.31 0.297±0.04 2.138±0.00
ENSG00000213659 ENST00000412878 N/A N/A 0.956±0.00 0.286±0.00 4.007±0.00 5.613±0.00 0.748±0.65 N/A N/A 5.637±0.00 0.498±0.00 0.753±0.71 0.043±0.00 N/A
ENSG00000216022 ENST00000401203 N/A 0.780±0.00 N/A N/A N/A N/A N/A N/A N/A 2.809±0.00 N/A N/A N/A 1.438±0.00
ENSG00000223502 ENST00000343087 0.440±0.00 0.815±0.00 N/A 0.611±0.00 0.534±0.37 0.265±0.00 0.493±0.18 0.626±0.00 0.394±0.00 0.111±0.00 0.037±0.00 0.348±0.00 N/A 0.230±0.14
ENSG00000231132 ENST00000435271 N/A 0.085±0.00 N/A 0.102±0.00 N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.088±0.00 N/A N/A
ENSG00000235279 ENST00000419889 N/A 0.027±0.00 0.423±0.00 1.541±0.00 N/A 5.231±0.00 0.102±0.00 0.080±0.00 N/A N/A N/A 0.691±0.00 N/A N/A
ENSG00000261368 ENST00000561565 N/A 0.012±0.00 N/A 0.170±0.00 N/A N/A N/A 0.012±0.00 N/A 0.010±0.00 N/A N/A N/A 0.547±0.06
ENSG00000278260 ENST00000621541 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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