C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006EP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171885-ENSG00000154080 CGP 9606 18:26852038-27185317
GeneTranscriptPositionBiotype
ENSG00000154080 (CHST9)
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 		ENST00000284224 (CHST9-201) 26915779-27048504 protein_coding
ENST00000580774 (CHST9-003) 26915779-27185298 protein_coding
ENST00000581714 (CHST9-002) 26915777-27143038 protein_coding
ENST00000618847 (CHST9-001) 26906481-27185317 protein_coding
ENSG00000171885 (AQP4)
aquaporin 4 		ENST00000383168 (AQP4-001) 26852038-26865818 protein_coding
ENST00000383170 (AQP4-008) 26861254-26865771 nonsense_mediated_decay
ENST00000440832 (AQP4-005) 26856211-26863190 protein_coding
ENST00000578776 (AQP4-002) 26860785-26865707 protein_coding
ENST00000581374 (AQP4-003) 26855817-26862848 protein_coding
ENST00000583022 (AQP4-006) 26856289-26862176 processed_transcript
ENST00000584088 (AQP4-004) 26860691-26862406 retained_intron
ENST00000622234 (AQP4-201) 26856211-26865689 protein_coding
ENSG00000266549 (RP11-526I8.2)
 ENST00000580510 (RP11-526I8.2-001) 26952201-26952558 processed_pseudogene
CIL_0006EP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024411-ENSMUSG00000047161 CGP 10090 18:15389394-15760157
GeneTranscriptPositionBiotype
ENSMUSG00000024411 (Aqp4)
aquaporin 4 		ENSMUST00000079081 (Aqp4-201) 15389394-15403684 protein_coding
ENSMUSG00000047161 (Chst9)
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 		ENSMUST00000053017 (Chst9-002) 15451924-15718046 protein_coding
ENSMUST00000130553 (Chst9-001) 15451924-15760157 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EP_0001ENSG00000154080ENST00000284224ENST00000580774ENST00000581714ENST00000618847ENSG00000171885ENST00000383168ENST00000383170ENST00000440832ENST00000578776ENST00000581374ENST00000583022ENST00000584088ENST00000622234ENSG00000266549ENST00000580510CIL_0006EP_0002ENSMUSG00000024411ENSMUST00000079081ENSMUSG00000047161ENSMUST00000053017ENSMUST00000130553
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EP_0001ENSG00000154080ENST00000284224ENST00000580774ENST00000581714ENST00000618847ENSG00000171885ENST00000383168ENST00000578776ENST00000581374ENST00000583022ENST00000622234ENSG00000266549ENST00000580510CIL_0006EP_0002ENSMUSG00000024411ENSMUST00000079081ENSMUSG00000047161ENSMUST00000053017ENSMUST00000130553
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154080 ENST00000284224 N/A N/A 0.181±0.00 N/A 0.303±0.00 0.490±0.00 N/A 0.520±0.00 0.085±0.00 N/A N/A 0.012±0.00 N/A N/A
ENST00000580774 N/A N/A 0.102±0.00 0.331±0.00 0.234±0.00 0.137±0.00 0.995±0.75 0.216±0.00 0.417±0.00 3.038±1.69 N/A 0.244±0.00 0.052±0.02 0.823±0.00
ENST00000581714 N/A N/A N/A 0.215±0.00 0.332±0.02 N/A 0.261±0.00 0.310±0.11 N/A 1.060±0.05 N/A 0.333±0.31 N/A 0.898±0.22
ENST00000618847 0.008±0.00 0.016±0.00 0.044±0.00 0.140±0.08 0.205±0.00 0.114±0.06 0.591±0.00 0.185±0.00 0.103±0.05 0.467±0.07 N/A 0.016±0.02 0.006±0.00 0.073±0.00
ENSG00000171885 ENST00000383168 0.018±0.00 0.039±0.00 N/A 111.291±68.53 1.298±0.00 N/A 1.262±0.00 0.043±0.00 N/A 20.242±3.53 2.734±2.33 0.297±0.00 0.031±0.03 0.336±0.00
ENST00000383170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578776 N/A 0.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581374 N/A N/A N/A N/A N/A N/A 0.462±0.00 N/A 0.410±0.00 N/A N/A N/A N/A N/A
ENST00000583022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.273±0.00
ENST00000584088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622234 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A
ENSG00000266549 ENST00000580510 N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A 1.042±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024411 ENSMUST00000079081 0.081±0.01 0.033±0.00 0.006±0.00 2.198±2.84 2.434±1.93 45.776±10.25 1.411±0.16 8.520±1.54 0.334±0.37 1.903±0.96 4.289±1.16 0.301±0.15 0.027±0.01 0.005±0.00
ENSMUSG00000047161 ENSMUST00000053017 N/A N/A 0.005±0.00 0.044±0.00 0.073±0.02 N/A N/A N/A 0.004±0.00 N/A N/A 0.090±0.05 0.083±0.05 0.018±0.00
ENSMUST00000130553 N/A N/A N/A 0.118±0.00 0.032±0.00 N/A N/A N/A 0.009±0.00 N/A N/A 0.369±0.20 0.044±0.03 0.071±0.00

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