C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006EQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134504-ENSG00000171885 CGP 9606 18:26454910-26865818
GeneTranscriptPositionBiotype
ENSG00000171885 (AQP4)
aquaporin 4 		ENST00000383168 (AQP4-001) 26852038-26865818 protein_coding
ENST00000383170 (AQP4-008) 26861254-26865771 nonsense_mediated_decay
ENST00000440832 (AQP4-005) 26856211-26863190 protein_coding
ENST00000578776 (AQP4-002) 26860785-26865707 protein_coding
ENST00000581374 (AQP4-003) 26855817-26862848 protein_coding
ENST00000583022 (AQP4-006) 26856289-26862176 processed_transcript
ENST00000584088 (AQP4-004) 26860691-26862406 retained_intron
ENST00000622234 (AQP4-201) 26856211-26865689 protein_coding
ENSG00000260372 (AQP4-AS1)
AQP4 antisense RNA 1 		ENST00000568797 (AQP4-AS1-001) 26865308-26935946 antisense
ENST00000578701 (AQP4-AS1-003) 26865307-27190698 antisense
ENST00000579964 (AQP4-AS1-004) 26655743-26933085 antisense
ENST00000582605 (AQP4-AS1-002) 26655742-26930757 antisense
ENSG00000263382 (RP11-552O4.1)
 ENST00000584560 (RP11-552O4.1-001) 26822813-26823979 lincRNA
ENSG00000263677 (RP11-17A19.2)
 ENST00000583852 (RP11-17A19.2-001) 26688111-26689668 lincRNA
ENSG00000263846 (CIAPIN1P)
cytokine induced apoptosis inhibitor 1 pseudogene 		ENST00000584883 (CIAPIN1P-001) 26599408-26600338 processed_pseudogene
ENSG00000265369 (PCAT18)
prostate cancer associated transcript 18 (non-protein coding) 		ENST00000579458 (PCAT18-001) 26687621-26703638 lincRNA
ENSG00000266184 (RP11-552O4.2)
 ENST00000583051 (RP11-552O4.2-001) 26831520-26832432 processed_pseudogene
ENSG00000275805 (RP11-349H17.2)
 ENST00000615734 (RP11-349H17.2-001) 26565723-26575626 sense_intronic
ENSG00000275900 (U3)
Small nucleolar RNA U3 		ENST00000391065 (U3.1-253) 26689316-26689529 snoRNA
ENSG00000277534 (RP11-9E17.1)
 ENST00000620414 (RP11-9E17.1-001) 26542971-26545791 sense_intronic
CIL_0006EQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036225-ENSMUSG00000024411 CGP 10090 18:14968685-15403684
GeneTranscriptPositionBiotype
ENSMUSG00000024411 (Aqp4)
aquaporin 4 		ENSMUST00000079081 (Aqp4-201) 15389394-15403684 protein_coding
ENSMUSG00000036225 (Kctd1)
potassium channel tetramerisation domain containing 1 		ENSMUST00000025992 (Kctd1-201) 14968685-15151446 protein_coding
ENSMUST00000168989 (Kctd1-202) 14968685-15063582 protein_coding
ENSMUSG00000071867 (Gm6304)
predicted gene 6304 		ENSMUST00000096579 (Gm6304-201) 15011246-15011692 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EQ_0001ENSG00000171885ENST00000383168ENST00000383170ENST00000440832ENST00000578776ENST00000581374ENST00000583022ENST00000584088ENST00000622234ENSG00000260372ENST00000568797ENST00000578701ENST00000579964ENST00000582605ENSG00000263382ENST00000584560ENSG00000263677ENST00000583852ENSG00000263846ENST00000584883ENSG00000265369ENST00000579458ENSG00000266184ENST00000583051ENSG00000275805ENST00000615734ENSG00000275900ENST00000391065ENSG00000277534ENST00000620414CIL_0006EQ_0002ENSMUSG00000024411ENSMUST00000079081ENSMUSG00000036225ENSMUST00000025992ENSMUST00000168989ENSMUSG00000071867ENSMUST00000096579
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EQ_0001ENSG00000171885ENST00000383168ENST00000578776ENST00000581374ENST00000583022ENST00000622234ENSG00000260372ENST00000568797ENST00000578701ENST00000579964ENST00000582605ENSG00000263382ENST00000584560ENSG00000263677ENST00000583852ENSG00000263846ENST00000584883ENSG00000265369ENST00000579458ENSG00000266184ENST00000583051ENSG00000275805ENST00000615734ENSG00000275900ENST00000391065ENSG00000277534ENST00000620414CIL_0006EQ_0002ENSMUSG00000024411ENSMUST00000079081ENSMUSG00000036225ENSMUST00000025992ENSMUST00000168989ENSMUSG00000071867ENSMUST00000096579
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171885 ENST00000383168 0.018±0.00 0.039±0.00 N/A 111.291±68.53 1.298±0.00 N/A 1.262±0.00 0.043±0.00 N/A 20.242±3.53 2.734±2.33 0.297±0.00 0.031±0.03 0.336±0.00
ENST00000383170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578776 N/A 0.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581374 N/A N/A N/A N/A N/A N/A 0.462±0.00 N/A 0.410±0.00 N/A N/A N/A N/A N/A
ENST00000583022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.273±0.00
ENST00000584088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622234 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A
ENSG00000260372 ENST00000568797 0.085±0.00 0.193±0.00 N/A 0.689±0.00 0.075±0.05 N/A 0.066±0.00 0.042±0.00 N/A 0.146±0.05 0.019±0.00 0.024±0.01 0.024±0.01 0.170±0.03
ENST00000578701 N/A N/A N/A N/A N/A N/A 0.014±0.00 0.018±0.00 N/A 0.134±0.01 N/A 0.029±0.00 N/A 0.083±0.01
ENST00000579964 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000582605 0.098±0.00 N/A N/A 0.870±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263382 ENST00000584560 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A 0.387±0.17
ENSG00000263677 ENST00000583852 N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A
ENSG00000263846 ENST00000584883 N/A N/A 0.116±0.00 0.057±0.00 0.019±0.00 0.017±0.00 N/A N/A N/A N/A N/A 0.018±0.00 N/A 0.028±0.00
ENSG00000265369 ENST00000579458 0.025±0.00 0.092±0.00 0.060±0.00 0.155±0.00 0.148±0.03 0.239±0.18 N/A 0.118±0.00 0.039±0.00 0.019±0.02 0.004±0.00 0.051±0.05 0.010±0.00 0.037±0.01
ENSG00000266184 ENST00000583051 N/A N/A N/A 0.223±0.00 N/A N/A N/A 0.037±0.00 N/A N/A 0.123±0.00 N/A N/A 0.033±0.00
ENSG00000275805 ENST00000615734 N/A N/A 0.090±0.00 0.019±0.00 0.008±0.00 N/A 0.015±0.00 0.063±0.00 0.030±0.00 0.050±0.00 N/A 0.049±0.01 N/A 0.022±0.00
ENSG00000275900 ENST00000391065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.282±0.00 N/A 0.187±0.00
ENSG00000277534 ENST00000620414 0.092±0.00 0.233±0.00 1.828±0.00 0.504±0.33 0.275±0.03 0.564±0.20 0.173±0.05 1.534±1.38 0.210±0.00 0.191±0.14 0.149±0.00 0.595±0.10 0.464±0.11 0.961±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024411 ENSMUST00000079081 0.081±0.01 0.033±0.00 0.006±0.00 2.198±2.84 2.434±1.93 45.776±10.25 1.411±0.16 8.520±1.54 0.334±0.37 1.903±0.96 4.289±1.16 0.301±0.15 0.027±0.01 0.005±0.00
ENSMUSG00000036225 ENSMUST00000025992 N/A N/A N/A 3.986±2.10 0.417±0.00 N/A N/A N/A 0.122±0.09 N/A 0.114±0.01 5.173±2.03 0.486±0.46 0.177±0.09
ENSMUST00000168989 2.022±1.91 5.633±0.93 3.141±1.31 4.413±1.63 1.261±0.79 1.473±0.30 1.318±0.21 2.397±0.80 0.194±0.11 1.862±0.16 0.287±0.11 2.820±1.28 0.284±0.23 0.274±0.12
ENSMUSG00000071867 ENSMUST00000096579 0.102±0.00 0.172±0.00 0.563±0.51 1.159±0.88 0.314±0.04 0.215±0.08 0.173±0.07 0.165±0.09 0.619±0.44 0.114±0.00 N/A 0.204±0.00 N/A 0.133±0.00

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