C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006FK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188636-ENSG00000186654 CGP 9606 22:44492572-44737681
GeneTranscriptPositionBiotype
ENSG00000187012 (LINC00207)
long intergenic non-protein coding RNA 207 		ENST00000334566 (LINC00207-001) 44569339-44572210 lincRNA
ENST00000460077 (LINC00207-002) 44570051-44571028 lincRNA
ENST00000603530 (LINC00207-004) 44569352-44572341 lincRNA
ENST00000605505 (LINC00207-003) 44569352-44572341 lincRNA
ENSG00000188636 (LDOC1L)
leucine zipper, down-regulated in cancer 1-like 		ENST00000341255 (LDOC1L-001) 44492572-44498298 protein_coding
ENSG00000215333 (KRT18P23)
keratin 18 pseudogene 23 		ENST00000435622 (KRT18P23-001) 44566965-44568247 processed_pseudogene
ENSG00000234300 (LINC00229)
long intergenic non-protein coding RNA 229 		ENST00000443783 (LINC00229-001) 44606939-44625419 lincRNA
ENSG00000248405 (PRR5-ARHGAP8)
PRR5-ARHGAP8 readthrough 		ENST00000352766 (PRR5-ARHGAP8-001) 44702475-44862706 protein_coding
ENST00000361473 (PRR5-ARHGAP8-002) 44702233-44862671 protein_coding
ENST00000389773 (PRR5-ARHGAP8-201) 44702502-44862784 protein_coding
ENST00000495250 (PRR5-ARHGAP8-004) 44725246-44809801 retained_intron
ENST00000515632 (PRR5-ARHGAP8-003) 44725261-44862671 protein_coding
ENST00000517296 (PRR5-ARHGAP8-202) 44702502-44862784 protein_coding
ENST00000618676 (PRR5-ARHGAP8-203) 44702502-44862784 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0006FK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055745-ENSMUSG00000036106 CGP 10090 15:84553398-84703673
GeneTranscriptPositionBiotype
ENSMUSG00000036106 (Prr5)
proline rich 5 (renal) 		ENSMUST00000065499 (Prr5-001) 84681002-84703672 protein_coding
ENSMUST00000171460 (Prr5-002) 84669620-84703673 protein_coding
ENSMUSG00000055745 (Ldoc1l)
leucine zipper, down-regulated in cancer 1-like 		ENSMUST00000069476 (Ldoc1l-201) 84553398-84557823 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FK_0001ENSG00000187012ENST00000334566ENST00000460077ENST00000603530ENST00000605505ENSG00000188636ENST00000341255ENSG00000215333ENST00000435622ENSG00000234300ENST00000443783ENSG00000248405ENST00000352766ENST00000361473ENST00000389773ENST00000495250ENST00000515632ENST00000517296ENST00000618676CIL_0006FK_0002ENSMUSG00000036106ENSMUST00000065499ENSMUST00000171460ENSMUSG00000055745ENSMUST00000069476
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FK_0001ENSG00000187012ENST00000334566ENST00000603530ENSG00000188636ENST00000341255ENSG00000215333ENST00000435622ENSG00000234300ENST00000443783ENSG00000248405ENST00000352766ENST00000361473ENST00000515632CIL_0006FK_0002ENSMUSG00000036106ENSMUST00000065499ENSMUST00000171460ENSMUSG00000055745ENSMUST00000069476
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187012 ENST00000334566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00
ENST00000460077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603530 N/A N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.898±0.00
ENST00000605505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188636 ENST00000341255 5.520±0.00 7.025±0.00 1.292±0.00 9.266±2.93 5.899±3.86 4.873±1.97 4.586±3.27 5.108±3.93 2.205±1.00 2.429±0.95 4.497±2.58 9.347±9.88 3.782±0.46 5.673±4.22
ENSG00000215333 ENST00000435622 N/A N/A N/A N/A 0.017±0.00 N/A N/A 0.034±0.00 0.015±0.00 0.017±0.00 N/A 0.023±0.00 0.021±0.00 N/A
ENSG00000234300 ENST00000443783 0.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.906±0.89
ENSG00000248405 ENST00000352766 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.528±0.00 0.076±0.00 N/A N/A N/A
ENST00000361473 N/A N/A N/A N/A N/A N/A N/A 6.284±0.00 N/A N/A N/A 6.998±0.00 N/A N/A
ENST00000389773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515632 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.636±0.00 N/A N/A N/A N/A
ENST00000517296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036106 ENSMUST00000065499 15.060±5.49 7.698±2.39 3.479±0.93 1.371±0.25 17.652±7.95 16.768±2.30 1.590±0.93 4.479±0.53 3.677±1.00 4.718±1.24 1.805±0.15 10.380±4.94 19.199±5.26 1.474±0.70
ENSMUST00000171460 5.135±0.00 N/A 1.541±0.00 3.048±1.13 N/A 1.879±0.00 0.990±0.98 15.738±4.66 2.282±0.67 1.293±0.00 1.237±0.69 1.961±0.79 14.817±11.40 1.595±0.75
ENSMUSG00000055745 ENSMUST00000069476 3.863±1.40 4.601±0.47 3.906±0.24 17.507±4.41 3.328±0.64 2.692±0.24 2.917±0.26 3.238±0.38 0.296±0.23 3.043±0.15 1.892±0.14 6.487±1.67 1.162±0.40 13.536±4.79

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