C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006G8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198478-ENSG00000118402 CGP 9606 6:79631283-79947580
GeneTranscriptPositionBiotype
ENSG00000118402 (ELOVL4)
ELOVL fatty acid elongase 4
ENST00000369816 (ELOVL4-001) 79914812-79947580 protein_coding
ENSG00000198478 (SH3BGRL2)
SH3 domain binding glutamate-rich protein like 2
ENST00000369838 (SH3BGRL2-001) 79631283-79703659 protein_coding
ENSG00000233835 (RP1-92C4.2)
ENST00000436418 (RP1-92C4.2-001) 79871873-79874610 lincRNA
ENSG00000235357 (RP1-159G19.1)
ENST00000438797 (RP1-159G19.1-001) 79803583-79807225 lincRNA
CIL_0006G8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032261-ENSMUSG00000032262 CGP 10090 9:83548327-83806277
GeneTranscriptPositionBiotype
ENSMUSG00000032261 (Sh3bgrl2)
SH3 domain binding glutamic acid-rich protein like 2
ENSMUST00000113215 (Sh3bgrl2-001) 83548328-83601346 protein_coding
ENSMUST00000185664 (Sh3bgrl2-004) 83576831-83597524 protein_coding
ENSMUST00000188030 (Sh3bgrl2-003) 83548350-83638299 protein_coding
ENSMUST00000188241 (Sh3bgrl2-002) 83548327-83638801 protein_coding
ENSMUST00000188617 (Sh3bgrl2-005) 83548329-83549011 retained_intron
ENSMUSG00000032262 (Elovl4)
elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
ENSMUST00000034796 (Elovl4-001) 83778692-83806252 protein_coding
ENSMUST00000183614 (Elovl4-002) 83780663-83806277 protein_coding
ENSMUSG00000100155 (RP23-101D11.2)
predicted gene 2109
ENSMUST00000189326 (RP23-101D11.2-001) 83691475-83693223 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G8_0001ENSG00000118402ENST00000369816ENSG00000198478ENST00000369838ENSG00000233835ENST00000436418ENSG00000235357ENST00000438797CIL_0006G8_0002ENSMUSG00000032261ENSMUST00000113215ENSMUST00000185664ENSMUST00000188030ENSMUST00000188241ENSMUST00000188617ENSMUSG00000032262ENSMUST00000034796ENSMUST00000183614ENSMUSG00000100155ENSMUST00000189326
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G8_0001ENSG00000118402ENST00000369816ENSG00000198478ENST00000369838ENSG00000233835ENST00000436418ENSG00000235357ENST00000438797CIL_0006G8_0002ENSMUSG00000032261ENSMUST00000113215ENSMUST00000185664ENSMUSG00000032262ENSMUST00000034796ENSMUST00000183614ENSMUSG00000100155ENSMUST00000189326
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118402 ENST00000369816 0.495±0.00 0.241±0.00 0.074±0.00 7.529±0.46 0.151±0.11 0.966±0.00 0.089±0.00 0.639±0.00 0.458±0.41 0.237±0.02 0.079±0.00 0.666±0.34 1.283±0.39 3.896±0.17
ENSG00000198478 ENST00000369838 42.743±0.00 6.338±0.00 3.585±0.00 10.973±0.33 11.011±0.43 13.502±2.55 2.257±0.89 9.810±1.13 7.652±1.81 6.408±1.42 1.670±1.04 5.190±3.09 5.677±2.34 2.663±2.32
ENSG00000233835 ENST00000436418 N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00
ENSG00000235357 ENST00000438797 N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A 0.102±0.00 N/A N/A N/A 0.083±0.00 0.027±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032261 ENSMUST00000113215 3.305±1.68 2.518±0.15 20.735±4.20 2.701±0.52 1.989±0.29 24.509±3.46 1.048±0.08 7.039±0.27 5.783±2.08 5.184±0.48 0.151±0.05 2.513±1.08 11.490±5.58 2.451±1.03
ENSMUST00000185664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.146±1.70 1.940±0.00
ENSMUST00000188030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032262 ENSMUST00000034796 0.296±0.19 0.281±0.15 3.461±0.65 8.731±3.43 1.423±1.03 0.166±0.11 0.046±0.00 0.083±0.04 0.031±0.02 4.860±4.69 0.113±0.09 0.571±0.35 0.496±0.53 0.116±0.07
ENSMUST00000183614 0.644±0.09 0.943±0.45 N/A N/A 2.831±1.82 0.334±0.17 0.099±0.03 0.112±0.05 0.035±0.00 0.114±0.03 0.150±0.00 1.018±0.33 0.154±0.00 0.020±0.00
ENSMUSG00000100155 ENSMUST00000189326 0.083±0.00 N/A 0.006±0.00 0.089±0.02 N/A N/A N/A 0.107±0.08 0.014±0.01 N/A N/A 0.201±0.15 0.012±0.00 0.051±0.02

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