C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006GG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146242-ENSG00000118420 CGP 9606 6:82363206-83065841
GeneTranscriptPositionBiotype
ENSG00000118420 (UBE3D)
ubiquitin protein ligase E3D
ENST00000237186 (UBE3D-004) 82892398-83065841 nonsense_mediated_decay
ENST00000369746 (UBE3D-001) 83017182-83057969 nonsense_mediated_decay
ENST00000369747 (UBE3D-003) 82892398-83065841 protein_coding
ENST00000430071 (UBE3D-002) 82893025-83065839 nonsense_mediated_decay
ENST00000503942 (UBE3D-007) 82892467-82894033 processed_transcript
ENST00000505226 (UBE3D-006) 83036026-83065823 nonsense_mediated_decay
ENST00000509102 (UBE3D-005) 82892953-83065751 nonsense_mediated_decay
ENSG00000146242 (TPBG)
trophoblast glycoprotein
ENST00000369750 (TPBG-001) 82363631-82370828 protein_coding
ENST00000535040 (TPBG-201) 82363206-82367417 protein_coding
ENST00000543496 (TPBG-202) 82364244-82367417 protein_coding
ENSG00000220091 (LAP3P1)
leucine aminopeptidase 3 pseudogene 1
ENST00000403648 (LAP3P1-001) 82924829-82925122 processed_pseudogene
ENSG00000227215 (RP11-445L13__B.3)
ENST00000451856 (RP11-445L13__B.3-001) 82932601-82938677 antisense
CIL_0006GG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035274-ENSMUSG00000032415 CGP 10090 9:85842380-86464950
GeneTranscriptPositionBiotype
ENSMUSG00000032415 (Ube2cbp)
ubiquitin-conjugating enzyme E2C binding protein
ENSMUST00000034986 (Ube2cbp-001) 86307306-86464950 protein_coding
ENSMUST00000121189 (Ube2cbp-003) 86307742-86464950 nonsense_mediated_decay
ENSMUSG00000035274 (Tpbg)
trophoblast glycoprotein
ENSMUST00000006559 (Tpbg-002) 85842380-85847040 protein_coding
ENSMUST00000098500 (Tpbg-001) 85842865-85847040 protein_coding
ENSMUST00000185559 (Tpbg-003) 85843361-85843925 processed_transcript
ENSMUSG00000056031 (9330154J02Rik)
RIKEN cDNA 9330154J02 gene
ENSMUST00000069896 (9330154J02Rik-201) 85820241-85843285 processed_transcript
ENSMUST00000185960 (9330154J02Rik-003) 85820302-85844323 antisense
ENSMUST00000187891 (9330154J02Rik-002) 85821526-85843284 retained_intron
ENSMUST00000189191 (9330154J02Rik-001) 85820241-85844131 antisense
ENSMUSG00000083731 (Gm16202)
predicted gene 16202
ENSMUST00000117532 (Gm16202-001) 86316141-86316684 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GG_0001ENSG00000118420ENST00000237186ENST00000369746ENST00000369747ENST00000430071ENST00000503942ENST00000505226ENST00000509102ENSG00000146242ENST00000369750ENST00000535040ENST00000543496ENSG00000220091ENST00000403648ENSG00000227215ENST00000451856CIL_0006GG_0002ENSMUSG00000032415ENSMUST00000034986ENSMUST00000121189ENSMUSG00000035274ENSMUST00000006559ENSMUST00000098500ENSMUST00000185559ENSMUSG00000056031ENSMUST00000069896ENSMUST00000185960ENSMUST00000187891ENSMUST00000189191ENSMUSG00000083731ENSMUST00000117532
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GG_0001ENSG00000118420ENST00000237186ENST00000369746ENST00000369747ENST00000430071ENST00000503942ENST00000505226ENST00000509102ENSG00000146242ENST00000369750ENST00000535040ENST00000543496ENSG00000220091ENST00000403648ENSG00000227215ENST00000451856CIL_0006GG_0002ENSMUSG00000032415ENSMUST00000034986ENSMUST00000121189ENSMUSG00000035274ENSMUST00000006559ENSMUST00000098500ENSMUSG00000056031ENSMUST00000069896ENSMUST00000187891ENSMUSG00000083731ENSMUST00000117532
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118420 ENST00000237186 N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A N/A
ENST00000369746 N/A N/A 0.611±0.00 0.087±0.00 N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000369747 N/A N/A N/A 0.688±0.37 N/A 0.574±0.00 0.264±0.00 N/A N/A N/A N/A 0.959±0.37 0.713±0.14 0.347±0.00
ENST00000430071 0.372±0.00 N/A N/A N/A 0.815±0.04 N/A N/A 0.486±0.00 N/A 0.238±0.00 N/A N/A N/A 0.571±0.00
ENST00000503942 0.547±0.00 0.802±0.00 N/A 0.817±0.00 0.214±0.00 0.705±0.00 0.811±0.00 0.836±0.35 0.287±0.00 1.323±0.11 0.344±0.00 1.757±0.00 1.383±0.00 1.283±0.03
ENST00000505226 N/A N/A N/A 0.068±0.00 0.062±0.00 0.102±0.00 N/A 0.092±0.00 N/A 0.066±0.00 N/A N/A 0.123±0.00 0.438±0.00
ENST00000509102 0.597±0.00 1.100±0.00 N/A 0.645±0.00 N/A 0.947±0.00 0.630±0.00 0.968±0.59 0.696±0.22 0.770±0.27 0.990±0.00 0.500±0.00 0.383±0.02 0.437±0.00
ENSG00000146242 ENST00000369750 0.355±0.00 N/A N/A 0.064±0.00 0.356±0.18 0.260±0.22 0.059±0.00 0.366±0.00 0.696±0.00 0.271±0.00 N/A 0.149±0.01 N/A 0.111±0.00
ENST00000535040 N/A 0.448±0.00 N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A 0.949±0.36 4.503±3.27 1.264±0.69
ENST00000543496 3.961±0.00 2.764±0.00 N/A 1.171±0.13 2.203±0.62 2.766±2.24 1.336±0.00 2.787±2.48 1.752±1.48 3.794±0.00 0.587±0.29 1.917±0.85 8.408±5.28 2.433±1.99
ENSG00000220091 ENST00000403648 N/A N/A 2.045±0.00 0.562±0.00 3.811±0.00 N/A 0.209±0.00 N/A 0.376±0.00 N/A N/A N/A N/A N/A
ENSG00000227215 ENST00000451856 N/A N/A N/A N/A 0.165±0.08 N/A N/A N/A 0.088±0.00 N/A N/A 0.150±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032415 ENSMUST00000034986 1.107±0.75 0.475±0.22 1.225±0.22 1.960±0.09 0.641±0.23 0.651±0.25 0.465±0.08 0.996±0.18 1.305±0.43 0.457±0.02 1.002±0.23 0.911±0.56 0.653±0.44 0.582±0.30
ENSMUST00000121189 N/A 0.433±0.34 N/A N/A 0.801±0.18 0.858±0.36 N/A N/A 0.315±0.14 0.218±0.06 0.193±0.00 1.253±0.38 N/A 0.140±0.04
ENSMUSG00000035274 ENSMUST00000006559 1.265±0.43 0.309±0.00 1.120±0.06 1.115±0.55 1.308±0.35 0.456±0.02 0.127±0.00 0.274±0.11 0.019±0.02 0.719±0.00 0.054±0.00 1.328±0.96 0.426±0.00 0.239±0.03
ENSMUST00000098500 1.943±1.76 1.272±0.41 5.445±1.08 4.653±2.42 4.853±2.36 2.636±1.16 0.115±0.00 0.500±0.27 0.113±0.09 1.110±0.27 0.052±0.02 6.077±3.44 0.366±0.33 0.128±0.10
ENSMUST00000185559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056031 ENSMUST00000069896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A
ENSMUST00000185960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00
ENSMUST00000189191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083731 ENSMUST00000117532 N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A 0.066±0.02 N/A N/A 0.141±0.00 0.036±0.00 N/A

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