C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006GR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214575-ENSG00000103723 CGP 9606 15:82543201-82709914
GeneTranscriptPositionBiotype
ENSG00000103723 (AP3B2)
adaptor-related protein complex 3, beta 2 subunit 		ENST00000261722 (AP3B2-001) 82659281-82709914 protein_coding
ENST00000535348 (AP3B2-003) 82659532-82709779 protein_coding
ENST00000535359 (AP3B2-002) 82659537-82709779 protein_coding
ENST00000535385 (AP3B2-010) 82681510-82709883 retained_intron
ENST00000535513 (AP3B2-005) 82688428-82709873 retained_intron
ENST00000537735 (AP3B2-009) 82659285-82662696 retained_intron
ENST00000538592 (AP3B2-012) 82662870-82663584 nonsense_mediated_decay
ENST00000541693 (AP3B2-011) 82680897-82699240 protein_coding
ENST00000542200 (AP3B2-004) 82685091-82709859 protein_coding
ENST00000543938 (AP3B2-008) 82659282-82680407 retained_intron
ENST00000545315 (AP3B2-013) 82662469-82663249 retained_intron
ENST00000559888 (AP3B2-015) 82680732-82681601 retained_intron
ENST00000560529 (AP3B2-014) 82689400-82709865 processed_transcript
ENST00000561455 (AP3B2-016) 82686815-82708851 processed_transcript
ENST00000620652 (AP3B2-201) 82659282-82709908 protein_coding
ENSG00000278013 (RP11-379H8.1)
 ENST00000621893 (RP11-379H8.1-001) 82540870-82562374 lincRNA
CIL_0006GR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025586-ENSMUSG00000062444 CGP 10090 7:81347026-81493925
GeneTranscriptPositionBiotype
ENSMUSG00000025586 (Cpeb1)
cytoplasmic polyadenylation element binding protein 1 		ENSMUST00000098331 (Cpeb1-001) 81347026-81454758 protein_coding
ENSMUST00000124937 (Cpeb1-004) 81436224-81455392 processed_transcript
ENSMUST00000130310 (Cpeb1-002) 81347028-81436377 protein_coding
ENSMUST00000135177 (Cpeb1-003) 81361586-81455465 processed_transcript
ENSMUST00000136689 (Cpeb1-008) 81349602-81355995 processed_transcript
ENSMUST00000151661 (Cpeb1-005) 81361750-81372485 processed_transcript
ENSMUST00000152319 (Cpeb1-007) 81349321-81350510 retained_intron
ENSMUST00000153419 (Cpeb1-006) 81361586-81372441 retained_intron
ENSMUST00000178892 (Cpeb1-201) 81347029-81454758 protein_coding
ENSMUSG00000062444 (Ap3b2)
adaptor-related protein complex 3, beta 2 subunit 		ENSMUST00000082090 (Ap3b2-001) 81460401-81493925 protein_coding
ENSMUST00000119121 (Ap3b2-003) 81479646-81493783 protein_coding
ENSMUST00000125634 (Ap3b2-005) 81477123-81478410 processed_transcript
ENSMUST00000147624 (Ap3b2-004) 81460399-81465295 retained_intron
ENSMUST00000152355 (Ap3b2-002) 81474380-81493706 retained_intron
ENSMUSG00000081747 (Rpl7a-ps9)
ribosomal protein L7A, pseudogene 9 		ENSMUST00000117118 (Rpl7a-ps9-001) 81445920-81446696 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GR_0001ENSG00000103723ENST00000261722ENST00000535348ENST00000535359ENST00000535385ENST00000535513ENST00000537735ENST00000538592ENST00000541693ENST00000542200ENST00000543938ENST00000545315ENST00000559888ENST00000560529ENST00000561455ENST00000620652ENSG00000278013ENST00000621893CIL_0006GR_0002ENSMUSG00000025586ENSMUST00000098331ENSMUST00000124937ENSMUST00000130310ENSMUST00000135177ENSMUST00000136689ENSMUST00000151661ENSMUST00000152319ENSMUST00000153419ENSMUST00000178892ENSMUSG00000062444ENSMUST00000082090ENSMUST00000119121ENSMUST00000125634ENSMUST00000147624ENSMUST00000152355ENSMUSG00000081747ENSMUST00000117118
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GR_0001ENSG00000103723ENST00000261722ENST00000535348ENST00000535359ENST00000535385ENST00000537735ENST00000541693ENST00000542200ENST00000543938ENST00000559888ENST00000560529ENST00000561455ENST00000620652ENSG00000278013ENST00000621893CIL_0006GR_0002ENSMUSG00000025586ENSMUST00000098331ENSMUST00000130310ENSMUST00000135177ENSMUST00000136689ENSMUST00000152319ENSMUST00000178892ENSMUSG00000062444ENSMUST00000082090ENSMUST00000119121ENSMUST00000125634ENSMUST00000147624ENSMUST00000152355ENSMUSG00000081747ENSMUST00000117118
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103723 ENST00000261722 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.065±0.01 N/A
ENST00000535348 0.192±0.00 N/A N/A N/A N/A 0.104±0.00 0.061±0.00 N/A N/A N/A N/A N/A 0.112±0.00 N/A
ENST00000535359 N/A N/A 0.140±0.00 N/A N/A N/A N/A 0.261±0.00 N/A N/A 0.180±0.00 N/A N/A N/A
ENST00000535385 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A 0.210±0.00 N/A
ENST00000535513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537735 N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A 1.058±0.00 N/A N/A
ENST00000538592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00 0.119±0.00 N/A
ENST00000542200 N/A 0.071±0.00 N/A N/A 0.101±0.00 N/A 0.012±0.00 0.127±0.00 0.005±0.00 N/A N/A 0.144±0.00 0.042±0.02 N/A
ENST00000543938 0.123±0.00 N/A 0.062±0.00 7.054±4.82 0.195±0.15 0.130±0.00 N/A 0.159±0.00 N/A 0.063±0.00 0.022±0.00 0.642±0.64 0.134±0.07 7.335±0.12
ENST00000545315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559888 N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A
ENST00000560529 N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A
ENST00000561455 0.474±0.00 1.354±0.00 N/A N/A 0.989±0.00 0.423±0.00 0.245±0.18 1.453±0.00 0.035±0.00 0.126±0.00 0.798±0.00 N/A N/A N/A
ENST00000620652 N/A N/A N/A 6.303±0.57 0.171±0.00 0.294±0.00 N/A 0.176±0.00 N/A 0.018±0.00 N/A N/A 0.082±0.02 N/A
ENSG00000278013 ENST00000621893 N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A 0.307±0.20
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025586 ENSMUST00000098331 N/A N/A N/A N/A N/A N/A N/A N/A 0.170±0.21 N/A N/A 2.481±1.31 N/A N/A
ENSMUST00000124937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130310 5.723±1.29 3.167±0.71 N/A 1.966±1.80 3.918±0.05 0.898±0.30 1.864±0.67 2.078±1.13 0.264±0.33 N/A 8.045±0.79 3.303±1.19 1.013±0.67 2.573±1.13
ENSMUST00000135177 3.892±0.00 4.519±0.00 N/A N/A 3.535±0.40 0.459±0.00 4.423±0.00 2.042±0.00 0.019±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136689 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A
ENSMUST00000151661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152319 N/A N/A N/A 8.219±7.07 N/A N/A N/A N/A N/A N/A N/A 4.534±0.00 0.496±0.13 N/A
ENSMUST00000153419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178892 N/A 1.308±0.00 1.978±0.00 2.225±0.00 1.027±0.01 N/A N/A N/A 0.034±0.04 N/A N/A 1.111±0.50 0.070±0.00 0.590±0.00
ENSMUSG00000062444 ENSMUST00000082090 6.697±6.40 2.602±0.65 0.372±0.14 54.252±8.93 0.135±0.06 0.747±0.16 0.041±0.02 0.055±0.01 0.027±0.02 0.019±0.00 0.048±0.02 3.858±1.55 1.201±1.62 0.067±0.03
ENSMUST00000119121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENSMUST00000125634 N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147624 N/A 1.166±0.00 N/A N/A 0.090±0.03 0.592±0.09 0.048±0.00 0.092±0.05 0.067±0.06 0.048±0.03 0.064±0.05 3.957±1.07 0.330±0.12 0.146±0.14
ENSMUST00000152355 N/A N/A N/A N/A 0.065±0.00 N/A 0.022±0.00 N/A N/A 0.014±0.00 0.018±0.00 N/A N/A N/A
ENSMUSG00000081747 ENSMUST00000117118 0.397±0.09 0.338±0.16 N/A 0.101±0.00 0.501±0.23 0.115±0.00 0.173±0.07 0.085±0.03 N/A 0.359±0.20 0.036±0.00 0.188±0.08 0.161±0.14 0.292±0.19

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