C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006HF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159251-ENSG00000021776 CGP 9606 15:34788096-34969839
GeneTranscriptPositionBiotype
ENSG00000021776 (AQR)
aquarius intron-binding spliceosomal factor 		ENST00000156471 (AQR-001) 34851782-34969839 protein_coding
ENST00000543879 (AQR-002) 34856351-34969733 nonsense_mediated_decay
ENST00000558202 (AQR-005) 34948134-34964402 retained_intron
ENST00000559090 (AQR-003) 34856500-34870264 retained_intron
ENST00000559767 (AQR-006) 34856827-34863224 retained_intron
ENST00000560117 (AQR-004) 34944304-34964453 protein_coding
ENSG00000159251 (ACTC1)
actin, alpha, cardiac muscle 1 		ENST00000290378 (ACTC1-001) 34788096-34796139 protein_coding
ENST00000557860 (ACTC1-003) 34791158-34792851 processed_transcript
ENST00000560563 (ACTC1-004) 34791701-34792522 retained_intron
ENSG00000231409 (RP11-83J16.1)
 ENST00000491307 (RP11-83J16.1-001) 34943080-34943394 processed_pseudogene
ENSG00000250007 (RP11-814P5.1)
 ENST00000503496 (RP11-814P5.1-001) 34755084-34812923 antisense
ENST00000558707 (RP11-814P5.1-002) 34755162-34790173 antisense
ENSG00000259751 (RP11-83J16.3)
 ENST00000559655 (RP11-83J16.3-001) 34849137-34850395 processed_pseudogene
CIL_0006HF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068614-ENSMUSG00000040383 CGP 10090 2:114047282-114187024
GeneTranscriptPositionBiotype
ENSMUSG00000040383 (Aqr)
aquarius 		ENSMUST00000043160 (Aqr-001) 114101170-114175339 protein_coding
ENSMUST00000102543 (Aqr-004) 114105162-114175277 protein_coding
ENSMUST00000125460 (Aqr-005) 114133368-114175246 processed_transcript
ENSMUST00000126701 (Aqr-009) 114132987-114141143 processed_transcript
ENSMUST00000129504 (Aqr-003) 114158599-114175338 processed_transcript
ENSMUST00000131785 (Aqr-002) 114152743-114175338 processed_transcript
ENSMUST00000140441 (Aqr-006) 114112126-114119187 processed_transcript
ENSMUST00000147191 (Aqr-007) 114170045-114181048 processed_transcript
ENSMUST00000154317 (Aqr-008) 114170045-114187024 processed_transcript
ENSMUSG00000068614 (Actc1)
actin, alpha, cardiac muscle 1 		ENSMUST00000090269 (Actc1-001) 114047282-114052887 protein_coding
ENSMUST00000149125 (Actc1-002) 114051903-114053548 protein_coding
ENSMUSG00000092201 (A530058N18Rik)
RIKEN cDNA A530058N18 gene 		ENSMUST00000131299 (A530058N18Rik-001) 114013563-114068324 antisense
ENSMUST00000140041 (A530058N18Rik-002) 114013567-114061498 processed_transcript
ENSMUSG00000092397 (C130080G10Rik)
RIKEN cDNA C130080G10 gene 		ENSMUST00000134456 (C130080G10Rik-004) 114056288-114061248 antisense
ENSMUST00000150005 (C130080G10Rik-002) 114054396-114061440 antisense
ENSMUST00000154140 (C130080G10Rik-001) 114054335-114061463 antisense
ENSMUST00000155185 (C130080G10Rik-005) 114056313-114064868 antisense
ENSMUST00000155678 (C130080G10Rik-003) 114055247-114060942 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HF_0001ENSG00000021776ENST00000156471ENST00000543879ENST00000558202ENST00000559090ENST00000559767ENST00000560117ENSG00000159251ENST00000290378ENST00000557860ENST00000560563ENSG00000231409ENST00000491307ENSG00000250007ENST00000503496ENST00000558707ENSG00000259751ENST00000559655CIL_0006HF_0002ENSMUSG00000040383ENSMUST00000043160ENSMUST00000102543ENSMUST00000125460ENSMUST00000126701ENSMUST00000129504ENSMUST00000131785ENSMUST00000140441ENSMUST00000147191ENSMUST00000154317ENSMUSG00000068614ENSMUST00000090269ENSMUST00000149125ENSMUSG00000092201ENSMUST00000131299ENSMUST00000140041ENSMUSG00000092397ENSMUST00000134456ENSMUST00000150005ENSMUST00000154140ENSMUST00000155185ENSMUST00000155678
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HF_0001ENSG00000021776ENST00000156471ENST00000543879ENST00000559090ENST00000559767ENSG00000159251ENST00000290378ENST00000557860ENSG00000231409ENST00000491307ENSG00000250007ENST00000503496ENSG00000259751ENST00000559655CIL_0006HF_0002ENSMUSG00000040383ENSMUST00000043160ENSMUST00000102543ENSMUSG00000068614ENSMUST00000090269ENSMUST00000149125ENSMUSG00000092201ENSMUST00000131299ENSMUST00000140041ENSMUSG00000092397ENSMUST00000134456ENSMUST00000150005ENSMUST00000154140ENSMUST00000155185ENSMUST00000155678
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000021776 ENST00000156471 1.350±0.00 1.721±0.00 1.544±0.00 2.004±0.08 1.646±0.13 1.787±0.00 0.811±0.14 2.877±0.00 1.719±0.88 1.826±1.25 1.128±0.00 2.416±1.25 1.398±0.22 1.950±0.49
ENST00000543879 3.049±0.00 1.946±0.00 2.142±0.00 N/A 2.316±0.74 0.710±0.00 1.218±0.02 1.811±0.83 2.795±2.03 1.679±0.00 0.547±0.04 1.262±0.21 2.950±0.56 3.789±0.00
ENST00000558202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559090 N/A 1.333±0.00 N/A N/A N/A 1.517±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.017±0.00 N/A N/A
ENST00000560117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159251 ENST00000290378 0.512±0.00 1.828±0.00 0.029±0.00 0.145±0.00 0.222±0.07 0.223±0.20 487.553±367.86 1.463±0.00 8.394±8.29 1.834±0.26 16.303±11.93 0.223±0.12 1.676±1.12 6.058±5.92
ENST00000557860 1.066±0.00 6.779±0.00 N/A 0.309±0.00 0.846±0.47 0.964±0.00 1216.198±948.33 4.795±0.00 27.069±26.90 4.392±0.00 74.246±0.00 0.635±0.21 3.290±0.37 15.083±14.19
ENST00000560563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231409 ENST00000491307 0.049±0.00 0.308±0.00 1.411±0.00 N/A N/A 0.133±0.09 N/A N/A 0.284±0.00 0.252±0.00 0.047±0.00 1.060±0.41 0.601±0.14 0.046±0.00
ENSG00000250007 ENST00000503496 N/A N/A N/A 0.149±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00
ENST00000558707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259751 ENST00000559655 N/A 0.168±0.00 N/A 0.039±0.00 0.025±0.00 0.011±0.00 N/A 0.072±0.00 N/A N/A 0.010±0.00 0.222±0.25 0.045±0.00 0.044±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040383 ENSMUST00000043160 9.643±2.58 16.511±1.90 7.214±0.80 10.990±5.47 11.426±2.99 10.474±1.42 4.123±0.97 8.598±1.70 7.550±3.63 12.215±0.72 2.504±0.48 14.336±4.07 8.003±2.83 6.068±2.65
ENSMUST00000102543 N/A N/A N/A N/A N/A N/A 0.893±0.14 N/A N/A N/A 0.437±0.02 4.332±1.66 6.713±0.00 1.422±0.00
ENSMUST00000125460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068614 ENSMUST00000090269 0.812±0.15 0.055±0.01 167.921±22.88 3.082±2.35 15.927±15.50 2.513±1.00 10876.800±767.49 1.767±0.13 3.329±9.29 263.991±41.03 79.346±30.10 0.459±0.24 3.693±1.44 0.276±0.02
ENSMUST00000149125 N/A 0.586±0.22 N/A 0.286±0.00 N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A
ENSMUSG00000092201 ENSMUST00000131299 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.02 0.020±0.00 N/A N/A
ENSMUSG00000092397 ENSMUST00000134456 N/A N/A N/A N/A N/A N/A 58.278±18.41 N/A 0.087±0.04 1.325±0.47 0.295±0.00 N/A N/A N/A
ENSMUST00000150005 N/A N/A 0.015±0.00 N/A N/A N/A 22.049±3.41 N/A 0.017±0.00 0.967±0.62 0.101±0.02 N/A N/A N/A
ENSMUST00000154140 N/A N/A 0.015±0.00 N/A N/A N/A 30.205±6.26 0.024±0.00 0.035±0.02 0.722±0.24 0.077±0.03 N/A N/A N/A
ENSMUST00000155185 N/A N/A 0.044±0.00 N/A 0.042±0.01 N/A N/A 0.035±0.00 0.035±0.01 N/A 0.113±0.04 0.046±0.00 N/A N/A
ENSMUST00000155678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A N/A

Loading