C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006IK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126561-ENSG00000168610 CGP 9606 17:42287547-42388568
GeneTranscriptPositionBiotype
ENSG00000126561 (STAT5A)
signal transducer and activator of transcription 5A
ENST00000345506 (STAT5A-001) 42287547-42311943 protein_coding
ENST00000444283 (STAT5A-004) 42288501-42292061 protein_coding
ENST00000468096 (STAT5A-006) 42306114-42310523 retained_intron
ENST00000469124 (STAT5A-002) 42288489-42290179 retained_intron
ENST00000478897 (STAT5A-003) 42289213-42292037 retained_intron
ENST00000479417 (STAT5A-005) 42304179-42306326 retained_intron
ENST00000546010 (STAT5A-008) 42288076-42310927 protein_coding
ENST00000587646 (STAT5A-011) 42306170-42309686 protein_coding
ENST00000588868 (STAT5A-009) 42288543-42311940 protein_coding
ENST00000590726 (STAT5A-012) 42288469-42300281 protein_coding
ENST00000590949 (STAT5A-007) 42287867-42310860 protein_coding
ENST00000591556 (STAT5A-010) 42306116-42308759 retained_intron
ENSG00000168610 (STAT3)
signal transducer and activator of transcription 3 (acute-phase response factor)
ENST00000264657 (STAT3-001) 42313324-42388568 protein_coding
ENST00000389272 (STAT3-013) 42315468-42388431 protein_coding
ENST00000404395 (STAT3-002) 42315559-42388414 protein_coding
ENST00000462269 (STAT3-006) 42315597-42317562 retained_intron
ENST00000462286 (STAT3-014) 42314872-42316853 retained_intron
ENST00000471989 (STAT3-005) 42323035-42325061 retained_intron
ENST00000478276 (STAT3-003) 42329658-42331538 retained_intron
ENST00000491272 (STAT3-007) 42315511-42317223 retained_intron
ENST00000498330 (STAT3-004) 42323064-42325157 retained_intron
ENST00000585360 (STAT3-017) 42345414-42348516 retained_intron
ENST00000585517 (STAT3-012) 42314854-42388439 protein_coding
ENST00000588065 (STAT3-016) 42346596-42388454 protein_coding
ENST00000588969 (STAT3-011) 42315491-42388482 protein_coding
ENST00000590776 (STAT3-015) 42386939-42388421 processed_transcript
CIL_0006IK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004043-ENSMUSG00000004040 CGP 10090 11:100859351-100939540
GeneTranscriptPositionBiotype
ENSMUSG00000004040 (Stat3)
signal transducer and activator of transcription 3
ENSMUST00000092671 (Stat3-010) 100888236-100939380 protein_coding
ENSMUST00000103114 (Stat3-002) 100885098-100939404 protein_coding
ENSMUST00000127638 (Stat3-001) 100886810-100939540 protein_coding
ENSMUST00000130686 (Stat3-004) 100905656-100908224 retained_intron
ENSMUST00000137093 (Stat3-014) 100888222-100890312 retained_intron
ENSMUST00000137367 (Stat3-007) 100893524-100894433 retained_intron
ENSMUST00000138438 (Stat3-011) 100888681-100939479 protein_coding
ENSMUST00000146971 (Stat3-006) 100894490-100898528 retained_intron
ENSMUST00000151544 (Stat3-008) 100894488-100895122 retained_intron
ENSMUST00000152601 (Stat3-013) 100889478-100893743 retained_intron
ENSMUST00000152623 (Stat3-012) 100905080-100905846 retained_intron
ENSMUST00000154170 (Stat3-005) 100902737-100905411 retained_intron
ENSMUST00000155972 (Stat3-009) 100893029-100893802 retained_intron
ENSMUST00000156645 (Stat3-003) 100893971-100899307 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IK_0001ENSG00000126561ENST00000345506ENST00000444283ENST00000468096ENST00000469124ENST00000478897ENST00000479417ENST00000546010ENST00000587646ENST00000588868ENST00000590726ENST00000590949ENST00000591556ENSG00000168610ENST00000264657ENST00000389272ENST00000404395ENST00000462269ENST00000462286ENST00000471989ENST00000478276ENST00000491272ENST00000498330ENST00000585360ENST00000585517ENST00000588065ENST00000588969ENST00000590776CIL_0006IK_0002ENSMUSG00000004040ENSMUST00000092671ENSMUST00000103114ENSMUST00000127638ENSMUST00000130686ENSMUST00000137093ENSMUST00000137367ENSMUST00000138438ENSMUST00000146971ENSMUST00000151544ENSMUST00000152601ENSMUST00000152623ENSMUST00000154170ENSMUST00000155972ENSMUST00000156645
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IK_0001ENSG00000126561ENST00000345506ENST00000588868ENST00000590949ENSG00000168610ENST00000264657ENST00000389272ENST00000404395ENST00000585517ENST00000588969CIL_0006IK_0002ENSMUSG00000004040ENSMUST00000092671ENSMUST00000127638ENSMUST00000138438ENSMUST00000155972
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126561 ENST00000345506 N/A N/A N/A N/A 2.774±0.00 N/A N/A 0.328±0.00 N/A 1.279±0.00 N/A 20.006±0.00 N/A N/A
ENST00000444283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588868 33.702±0.00 7.769±0.00 N/A 2.035±0.00 50.298±0.00 5.160±3.08 2.219±0.00 3.109±0.00 1.560±0.10 6.331±0.00 7.040±0.00 4.716±0.80 2.454±0.09 4.454±0.00
ENST00000590726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A N/A
ENST00000591556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168610 ENST00000264657 32.917±0.00 37.606±0.00 2.716±0.00 5.322±3.17 11.402±3.47 14.799±9.77 38.503±0.00 5.035±0.00 10.179±2.76 27.947±19.09 24.772±21.55 13.702±8.90 11.475±1.04 8.155±0.96
ENST00000389272 N/A N/A N/A 1.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404395 N/A N/A N/A 4.383±3.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.739±0.00
ENST00000462269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585517 N/A N/A 2.392±0.00 3.371±2.44 7.752±0.00 N/A 1.850±0.00 4.577±0.00 4.927±0.00 5.322±0.00 N/A 3.999±0.00 N/A N/A
ENST00000588065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588969 N/A N/A 4.757±0.00 N/A 8.529±0.00 7.563±0.00 2.530±0.00 5.743±0.00 5.085±0.00 11.331±0.00 6.816±0.00 8.358±0.00 5.471±0.00 N/A
ENST00000590776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004040 ENSMUST00000092671 N/A N/A N/A 6.556±0.00 N/A N/A N/A N/A N/A N/A N/A 20.694±0.00 11.901±1.98 5.873±0.00
ENSMUST00000103114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127638 50.506±9.86 33.126±4.60 37.966±2.78 7.446±2.50 66.547±3.28 53.748±7.17 40.185±2.67 23.558±2.54 22.982±7.11 73.355±2.03 6.506±2.01 54.159±16.79 18.338±8.30 8.311±3.74
ENSMUST00000130686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.995±0.00 N/A
ENSMUST00000146971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 73.444±0.00 N/A
ENSMUST00000156645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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