C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059523-ENSDARG00000013078 CGP 7955 6:52032571-52176108
GeneTranscriptPositionBiotype
ENSDARG00000013078 (ywhaba)
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a 		ENSDART00000025940 (ywhaba-001) 52163393-52176108 protein_coding
ENSDART00000143458 (ywhaba-002) 52163746-52171511 protein_coding
ENSDARG00000059523 (RIMS4)
regulating synaptic membrane exocytosis 4 		ENSDART00000082821 (RIMS4-001) 52032571-52107246 protein_coding
CIL_0006IP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101098-ENSG00000166913 CGP 9606 20:44751808-44908532
GeneTranscriptPositionBiotype
ENSG00000101098 (RIMS4)
regulating synaptic membrane exocytosis 4 		ENST00000372851 (RIMS4-002) 44751808-44810338 protein_coding
ENST00000541604 (RIMS4-003) 44755911-44810271 protein_coding
ENSG00000124249 (KCNK15)
potassium channel, subfamily K, member 15 		ENST00000372861 (KCNK15-001) 44745780-44752313 protein_coding
ENSG00000166913 (YWHAB)
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 		ENST00000353703 (YWHAB-002) 44885676-44908532 protein_coding
ENST00000372839 (YWHAB-001) 44885711-44908532 protein_coding
ENST00000428262 (YWHAB-004) 44885740-44901833 protein_coding
ENST00000445830 (YWHAB-003) 44885752-44901756 protein_coding
ENST00000477896 (YWHAB-006) 44903819-44905079 processed_transcript
ENST00000479421 (YWHAB-005) 44885702-44906520 processed_transcript
ENST00000479758 (YWHAB-007) 44905591-44906520 processed_transcript
ENSG00000277708 (PGBD4P2)
piggyBac transposable element derived 4 pseudogene 2 		ENST00000616045 (PGBD4P2-001) 44841925-44842539 unprocessed_pseudogene
CIL_0006IP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035226-ENSMUSG00000018326 CGP 10090 2:163859751-164018588
GeneTranscriptPositionBiotype
ENSMUSG00000018326 (Ywhab)
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 		ENSMUST00000018470 (Ywhab-001) 163994960-164018588 protein_coding
ENSMUST00000131288 (Ywhab-002) 163995503-164015283 protein_coding
ENSMUSG00000035226 (Rims4)
regulating synaptic membrane exocytosis 4 		ENSMUST00000044734 (Rims4-001) 163859751-163918683 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IP_0001ENSDARG00000013078ENSDART00000025940ENSDART00000143458ENSDARG00000059523ENSDART00000082821CIL_0006IP_0002ENSG00000101098ENST00000372851ENST00000541604ENSG00000124249ENST00000372861ENSG00000166913ENST00000353703ENST00000372839ENST00000428262ENST00000445830ENST00000477896ENST00000479421ENST00000479758ENSG00000277708ENST00000616045CIL_0006IP_0003ENSMUSG00000018326ENSMUST00000018470ENSMUST00000131288ENSMUSG00000035226ENSMUST00000044734
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IP_0001ENSDARG00000013078ENSDART00000025940ENSDARG00000059523ENSDART00000082821CIL_0006IP_0002ENSG00000101098ENST00000372851ENST00000541604ENSG00000124249ENST00000372861ENSG00000166913ENST00000353703ENST00000372839ENST00000479421ENSG00000277708ENST00000616045CIL_0006IP_0003ENSMUSG00000018326ENSMUST00000018470ENSMUST00000131288ENSMUSG00000035226ENSMUST00000044734
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013078 ENSDART00000025940 N/A N/A N/A 160.408±82.61 N/A N/A 53.175±24.22 32.532±14.84 9.055±0.00 N/A 37.005±0.00 N/A N/A N/A
ENSDART00000143458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059523 ENSDART00000082821 N/A N/A N/A 11.721±0.00 N/A N/A 0.279±0.18 N/A 0.042±0.00 N/A 0.625±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101098 ENST00000372851 0.335±0.00 0.126±0.00 N/A 7.392±5.21 0.549±0.00 0.141±0.00 0.024±0.02 0.134±0.00 0.172±0.00 0.161±0.07 0.235±0.13 2.864±0.02 0.056±0.02 7.742±1.97
ENST00000541604 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A 0.154±0.00 N/A
ENSG00000124249 ENST00000372861 1.558±0.00 1.055±0.00 N/A N/A 5.245±0.00 0.577±0.00 0.420±0.00 1.441±0.00 0.084±0.00 1.100±0.82 N/A 1.720±1.81 0.169±0.08 N/A
ENSG00000166913 ENST00000353703 95.409±0.00 69.070±0.00 7.053±0.00 88.865±42.13 46.688±19.31 39.016±19.08 19.343±14.30 51.276±42.54 19.424±3.94 40.751±16.31 26.229±0.00 38.541±16.99 69.001±10.11 28.581±24.51
ENST00000372839 N/A N/A 6.674±0.00 N/A 4.602±0.00 6.533±2.25 4.597±1.58 3.309±0.00 5.003±2.38 3.842±0.00 3.579±0.67 27.563±24.19 40.582±28.93 16.342±3.91
ENST00000428262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479421 N/A N/A N/A N/A N/A 11.551±0.00 N/A N/A N/A N/A 6.202±0.00 76.880±0.00 104.441±0.00 32.947±0.00
ENST00000479758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277708 ENST00000616045 N/A N/A N/A N/A N/A 0.423±0.00 N/A N/A N/A N/A N/A 0.116±0.00 N/A 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018326 ENSMUST00000018470 87.577±40.43 65.645±6.34 66.255±0.35 67.697±7.65 49.193±14.56 26.151±2.72 13.694±1.25 32.538±3.34 20.182±9.28 34.359±0.86 12.237±1.04 33.114±16.82 55.586±18.81 7.898±2.36
ENSMUST00000131288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.239±0.00 39.659±0.00 9.708±0.00
ENSMUSG00000035226 ENSMUST00000044734 1.017±0.48 24.376±2.77 0.024±0.00 5.945±4.04 0.841±0.33 1.608±0.15 0.271±0.04 0.075±0.04 0.163±0.26 0.079±0.02 0.528±0.09 10.623±7.00 0.134±0.16 0.625±0.17

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