C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006J7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138678-ENSG00000163623 CGP 9606 4:83535914-84498450
GeneTranscriptPositionBiotype
ENSG00000138678 (AGPAT9)
1-acylglycerol-3-phosphate O-acyltransferase 9 		ENST00000264409 (AGPAT9-002) 83536411-83605875 protein_coding
ENST00000395226 (AGPAT9-001) 83536108-83605875 protein_coding
ENST00000506766 (AGPAT9-007) 83535975-83544613 processed_transcript
ENST00000509044 (AGPAT9-004) 83598529-83605139 processed_transcript
ENST00000509412 (AGPAT9-005) 83536307-83544603 processed_transcript
ENST00000513683 (AGPAT9-003) 83588258-83595335 retained_intron
ENST00000514309 (AGPAT9-006) 83535914-83544613 processed_transcript
ENST00000611707 (AGPAT9-201) 83535914-83605872 protein_coding
ENSG00000163623 (NKX6-1)
NK6 homeobox 1 		ENST00000295886 (NKX6-1-001) 84491987-84498450 protein_coding
ENST00000515820 (NKX6-1-002) 84491987-84496950 protein_coding
ENSG00000214980 (RP11-274J2.1)
 ENST00000510707 (RP11-274J2.1-001) 84244003-84245488 processed_pseudogene
ENSG00000248749 (RP11-42A4.1)
 ENST00000504840 (RP11-42A4.1-001) 84371393-84380189 lincRNA
ENSG00000249171 (RP11-767N15.1)
 ENST00000510169 (RP11-767N15.1-001) 83668510-83731755 lincRNA
ENSG00000250546 (RP11-8L2.1)
 ENST00000508406 (RP11-8L2.1-001) 83968082-84293412 lincRNA
ENST00000510016 (RP11-8L2.1-003) 84147733-84149288 antisense
ENST00000513489 (RP11-8L2.1-002) 83796436-84284327 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006J7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029314-ENSMUSG00000035187 CGP 10090 5:100845713-101664996
GeneTranscriptPositionBiotype
ENSMUSG00000029314 (Agpat9)
1-acylglycerol-3-phosphate O-acyltransferase 9 		ENSMUST00000031255 (Agpat9-002) 100846219-100899099 protein_coding
ENSMUST00000092990 (Agpat9-003) 100846364-100899102 protein_coding
ENSMUST00000112887 (Agpat9-001) 100846130-100899099 protein_coding
ENSMUST00000144623 (Agpat9-004) 100845713-100846810 protein_coding
ENSMUST00000145612 (Agpat9-005) 100846417-100846850 protein_coding
ENSMUSG00000035187 (Nkx6-1)
NK6 homeobox 1 		ENSMUST00000044125 (Nkx6-1-001) 101659177-101664996 protein_coding
ENSMUSG00000087611 (4930458D05Rik)
RIKEN cDNA 4930458D05 gene 		ENSMUST00000142871 (4930458D05Rik-001) 100840797-100847167 processed_transcript
ENSMUSG00000092503 (Gm20484)
predicted gene 20484 		ENSMUST00000173738 (Gm20484-001) 101599314-101602375 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J7_0001ENSG00000138678ENST00000264409ENST00000395226ENST00000506766ENST00000509044ENST00000509412ENST00000513683ENST00000514309ENST00000611707ENSG00000163623ENST00000295886ENST00000515820ENSG00000214980ENST00000510707ENSG00000248749ENST00000504840ENSG00000249171ENST00000510169ENSG00000250546ENST00000508406ENST00000510016ENST00000513489CIL_0006J7_0002ENSMUSG00000029314ENSMUST00000031255ENSMUST00000092990ENSMUST00000112887ENSMUST00000144623ENSMUST00000145612ENSMUSG00000035187ENSMUST00000044125ENSMUSG00000087611ENSMUST00000142871ENSMUSG00000092503ENSMUST00000173738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J7_0001ENSG00000138678ENST00000264409ENST00000395226ENST00000513683ENST00000611707ENSG00000163623ENST00000295886ENST00000515820ENSG00000214980ENST00000510707ENSG00000248749ENST00000504840ENSG00000249171ENST00000510169ENSG00000250546ENST00000508406ENST00000513489CIL_0006J7_0002ENSMUSG00000029314ENSMUST00000031255ENSMUST00000092990ENSMUST00000112887ENSMUST00000144623ENSMUSG00000035187ENSMUST00000044125ENSMUSG00000087611ENSMUST00000142871ENSMUSG00000092503ENSMUST00000173738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138678 ENST00000264409 2.880±0.00 N/A 9.005±0.00 N/A N/A 4.509±2.93 4.652±3.17 0.970±0.73 0.418±0.00 N/A 5.194±1.40 1.548±0.63 N/A N/A
ENST00000395226 3.132±0.00 N/A 7.588±0.00 1.083±0.42 2.378±0.46 2.086±0.00 7.497±0.25 6.082±0.00 1.095±0.00 1.669±0.06 15.320±0.00 1.954±0.91 0.598±0.12 8.791±6.62
ENST00000506766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513683 N/A N/A N/A N/A N/A N/A N/A 1.570±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611707 N/A 0.964±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.300±0.00 0.301±0.00 1.958±0.00
ENSG00000163623 ENST00000295886 0.008±0.00 0.024±0.00 0.081±0.00 0.289±0.00 0.023±0.00 0.007±0.00 0.008±0.00 0.008±0.00 N/A 0.102±0.00 0.006±0.00 0.396±0.39 0.125±0.11 0.614±0.18
ENST00000515820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.001±0.00 0.171±0.00 0.019±0.00 0.148±0.03
ENSG00000214980 ENST00000510707 N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A 0.015±0.00
ENSG00000248749 ENST00000504840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.03
ENSG00000249171 ENST00000510169 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 0.030±0.00
ENSG00000250546 ENST00000508406 N/A N/A N/A 0.003±0.00 N/A 0.042±0.00 0.006±0.00 N/A N/A 0.005±0.00 N/A N/A N/A 0.015±0.01
ENST00000510016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029314 ENSMUST00000031255 18.937±6.42 2.478±1.56 2.451±0.53 0.077±0.02 11.827±2.24 2.209±0.46 2.614±0.61 6.240±1.29 2.423±1.96 1.033±0.07 0.522±0.26 2.648±1.52 6.657±3.93 5.368±2.61
ENSMUST00000092990 4.980±1.53 1.143±0.45 0.805±0.13 0.131±0.08 2.936±0.61 0.911±0.17 0.995±0.19 1.475±0.33 0.765±0.39 0.513±0.18 0.439±0.10 1.020±0.54 3.540±0.90 5.442±1.99
ENSMUST00000112887 N/A 1.956±0.86 N/A N/A N/A 0.451±0.08 N/A N/A 0.184±0.00 N/A 0.391±0.00 0.652±0.07 N/A 4.223±1.73
ENSMUST00000144623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.703±0.00 N/A N/A N/A
ENSMUST00000145612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035187 ENSMUST00000044125 0.025±0.00 0.013±0.00 0.088±0.02 0.535±0.42 0.063±0.03 0.011±0.00 0.051±0.02 0.056±0.03 0.019±0.01 0.173±0.12 0.057±0.00 0.028±0.01 0.197±0.26 0.236±0.11
ENSMUSG00000087611 ENSMUST00000142871 N/A N/A 1.224±0.04 0.031±0.01 N/A 0.281±0.02 N/A 0.595±0.01 N/A 0.176±0.00 0.176±0.06 0.204±0.00 N/A 4.793±0.88
ENSMUSG00000092503 ENSMUST00000173738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.137±1.98

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