C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006J9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163319-ENSG00000163322 CGP 9606 4:83455932-83523348
GeneTranscriptPositionBiotype
ENSG00000163319 (MRPS18C)
mitochondrial ribosomal protein S18C 		ENST00000295491 (MRPS18C-001) 83455965-83462298 protein_coding
ENST00000505525 (MRPS18C-007) 83459620-83461236 retained_intron
ENST00000505719 (MRPS18C-005) 83456090-83461328 protein_coding
ENST00000507019 (MRPS18C-003) 83455983-83461423 protein_coding
ENST00000507349 (MRPS18C-006) 83456055-83461237 protein_coding
ENST00000509571 (MRPS18C-009) 83461193-83469735 processed_transcript
ENST00000509970 (MRPS18C-010) 83456083-83467504 protein_coding
ENST00000512375 (MRPS18C-002) 83455932-83459144 retained_intron
ENST00000514581 (MRPS18C-004) 83459672-83461235 retained_intron
ENSG00000163322 (FAM175A)
family with sequence similarity 175, member A 		ENST00000321945 (FAM175A-001) 83459517-83485181 protein_coding
ENST00000475656 (FAM175A-002) 83460945-83485103 nonsense_mediated_decay
ENST00000503217 (FAM175A-006) 83470274-83485100 protein_coding
ENST00000504777 (FAM175A-003) 83462075-83469901 retained_intron
ENST00000505489 (FAM175A-008) 83467454-83523348 protein_coding
ENST00000506553 (FAM175A-009) 83462009-83485555 protein_coding
ENST00000511801 (FAM175A-005) 83470203-83485103 nonsense_mediated_decay
ENST00000515303 (FAM175A-004) 83478808-83485065 protein_coding
ENST00000611288 (FAM175A-010) 83463723-83470333 protein_coding
ENSG00000213608 (SLC25A14P1)
solute carrier family 25 (mitochondrial carrier, brain), member 14 pseudogene 1 		ENST00000502867 (SLC25A14P1-001) 83477524-83478424 processed_pseudogene
ENSG00000239525 (RPL30P5)
ribosomal protein L30 pseudogene 5 		ENST00000494923 (RPL30P5-001) 83502699-83503034 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006J9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016833-ENSMUSG00000035234 CGP 10090 5:100798627-100820965
GeneTranscriptPositionBiotype
ENSMUSG00000016833 (Mrps18c)
mitochondrial ribosomal protein S18C 		ENSMUST00000016977 (Mrps18c-001) 100798627-100804471 protein_coding
ENSMUST00000112898 (Mrps18c-004) 100798737-100804461 protein_coding
ENSMUST00000112901 (Mrps18c-002) 100798747-100804471 protein_coding
ENSMUST00000140296 (Mrps18c-003) 100798743-100799689 retained_intron
ENSMUST00000143477 (Mrps18c-005) 100803910-100804469 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J9_0001ENSG00000163319ENST00000295491ENST00000505525ENST00000505719ENST00000507019ENST00000507349ENST00000509571ENST00000509970ENST00000512375ENST00000514581ENSG00000163322ENST00000321945ENST00000475656ENST00000503217ENST00000504777ENST00000505489ENST00000506553ENST00000511801ENST00000515303ENST00000611288ENSG00000213608ENST00000502867ENSG00000239525ENST00000494923CIL_0006J9_0002ENSMUSG00000016833ENSMUST00000016977ENSMUST00000112898ENSMUST00000112901ENSMUST00000140296ENSMUST00000143477
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J9_0001ENSG00000163319ENST00000295491ENST00000505719ENST00000507019ENST00000512375ENSG00000163322ENST00000321945ENST00000475656ENST00000506553ENSG00000213608ENST00000502867ENSG00000239525ENST00000494923CIL_0006J9_0002ENSMUSG00000016833ENSMUST00000016977ENSMUST00000112898ENSMUST00000112901ENSMUST00000140296ENSMUST00000143477
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163319 ENST00000295491 N/A N/A 1.923±0.00 N/A N/A N/A N/A 2.825±0.00 2.395±0.00 2.284±0.00 N/A N/A N/A N/A
ENST00000505525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505719 N/A N/A N/A N/A N/A N/A 6.305±0.00 N/A 5.018±0.00 N/A N/A N/A N/A N/A
ENST00000507019 N/A N/A N/A N/A N/A 3.456±0.00 N/A 1.938±0.00 N/A N/A 2.603±0.00 5.618±0.00 5.464±0.31 N/A
ENST00000507349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512375 N/A N/A N/A N/A 1.428±0.00 N/A N/A N/A N/A 0.983±0.00 N/A 0.913±0.00 N/A N/A
ENST00000514581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163322 ENST00000321945 1.650±0.00 N/A 0.889±0.00 N/A 0.825±0.00 N/A 0.906±0.00 0.604±0.19 N/A 0.588±0.00 1.988±0.00 2.868±0.09 N/A 2.321±0.00
ENST00000475656 4.588±0.00 3.692±0.00 N/A 1.687±0.00 3.023±0.02 2.911±1.20 1.411±0.50 1.475±1.08 N/A 2.051±0.12 3.468±2.74 4.063±2.48 1.363±0.05 7.234±1.22
ENST00000503217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506553 N/A N/A N/A N/A N/A 0.983±0.00 N/A N/A 1.628±0.00 N/A N/A 1.399±0.00 1.224±0.00 10.721±0.00
ENST00000511801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213608 ENST00000502867 N/A N/A 0.679±0.00 0.123±0.07 N/A 0.098±0.00 0.064±0.00 N/A 0.063±0.00 0.077±0.00 N/A 0.295±0.18 0.057±0.00 0.062±0.01
ENSG00000239525 ENST00000494923 N/A N/A N/A 0.084±0.00 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016833 ENSMUST00000016977 7.103±1.00 3.093±1.43 23.579±1.34 22.893±9.20 6.530±0.93 3.253±1.63 10.392±1.62 9.470±4.27 24.073±22.27 5.989±1.62 30.419±2.00 17.192±17.53 34.416±13.40 11.062±3.38
ENSMUST00000112898 4.188±0.00 7.157±3.38 N/A N/A N/A 8.934±2.88 7.031±3.03 15.776±2.61 22.621±2.70 5.521±1.54 N/A 3.025±1.38 N/A 8.027±3.27
ENSMUST00000112901 1.104±0.29 2.449±1.26 N/A N/A 7.661±0.00 2.400±0.43 N/A N/A N/A N/A N/A 2.005±1.18 N/A N/A
ENSMUST00000140296 N/A N/A N/A 15.912±0.00 5.182±0.00 19.285±0.83 N/A 58.663±0.00 40.158±3.43 N/A N/A 15.249±6.74 N/A N/A
ENSMUST00000143477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.714±4.01 47.144±0.00 N/A

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