C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170925-ENSG00000101842 CGP 9606 X:107980864-108079184
GeneTranscriptPositionBiotype
ENSG00000101842 (VSIG1)
V-set and immunoglobulin domain containing 1 		ENST00000217957 (VSIG1-001) 108045014-108079097 protein_coding
ENST00000415430 (VSIG1-201) 108044970-108079184 protein_coding
ENST00000458383 (VSIG1-003) 108045065-108067118 protein_coding
ENST00000479635 (VSIG1-004) 108072796-108073853 retained_intron
ENST00000485533 (VSIG1-002) 108064739-108073264 processed_transcript
ENSG00000170925 (TEX13B)
testis expressed 13B 		ENST00000302917 (TEX13B-001) 107980864-107982370 protein_coding
ENSG00000277883 (RP6-191P20.5)
 ENST00000622303 (RP6-191P20.5-001) 107974078-107985008 unprocessed_pseudogene
CIL_0006JG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042386-ENSMUSG00000031430 CGP 10090 X:140808307-140939472
GeneTranscriptPositionBiotype
ENSMUSG00000031430 (Vsig1)
V-set and immunoglobulin domain containing 1 		ENSMUST00000033806 (Vsig1-001) 140907608-140939472 protein_coding
ENSMUST00000127629 (Vsig1-002) 140923189-140938233 processed_transcript
ENSMUSG00000042386 (Tex13)
testis expressed gene 13 		ENSMUST00000044179 (Tex13-001) 140808307-140813433 protein_coding
ENSMUST00000132970 (Tex13-002) 140809268-140810852 retained_intron
ENSMUSG00000082165 (Gm7091)
predicted gene 7091 		ENSMUST00000116438 (Gm7091-001) 140821938-140822523 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JG_0001ENSG00000101842ENST00000217957ENST00000415430ENST00000458383ENST00000479635ENST00000485533ENSG00000170925ENST00000302917ENSG00000277883ENST00000622303CIL_0006JG_0002ENSMUSG00000031430ENSMUST00000033806ENSMUST00000127629ENSMUSG00000042386ENSMUST00000044179ENSMUST00000132970ENSMUSG00000082165ENSMUST00000116438
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JG_0001ENSG00000101842ENST00000217957ENST00000415430ENST00000485533ENSG00000170925ENST00000302917ENSG00000277883ENST00000622303CIL_0006JG_0002ENSMUSG00000031430ENSMUST00000033806ENSMUST00000127629ENSMUSG00000042386ENSMUST00000044179ENSMUST00000132970ENSMUSG00000082165ENSMUST00000116438
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101842 ENST00000217957 0.068±0.00 0.469±0.00 N/A 0.126±0.07 0.048±0.03 0.032±0.00 0.022±0.00 0.097±0.00 0.112±0.00 0.179±0.00 0.075±0.00 0.073±0.06 0.155±0.00 16.016±6.28
ENST00000415430 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A 0.138±0.00 N/A
ENST00000458383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485533 N/A N/A N/A 0.298±0.00 0.258±0.00 N/A N/A N/A 1.511±0.00 N/A N/A N/A N/A N/A
ENSG00000170925 ENST00000302917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.522±0.37
ENSG00000277883 ENST00000622303 N/A N/A N/A 0.044±0.02 N/A 0.089±0.00 N/A 0.026±0.00 0.113±0.00 N/A N/A 0.039±0.03 N/A 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031430 ENSMUST00000033806 0.222±0.15 N/A 0.005±0.00 N/A N/A 3.173±0.89 0.027±0.01 0.049±0.03 0.011±0.00 0.127±0.04 N/A N/A 0.012±0.00 7.302±0.64
ENSMUST00000127629 0.264±0.06 N/A 0.012±0.00 0.018±0.00 0.067±0.00 1.231±0.18 N/A 0.039±0.01 0.024±0.01 0.134±0.05 N/A 0.023±0.00 0.039±0.03 30.312±7.43
ENSMUSG00000042386 ENSMUST00000044179 0.049±0.00 N/A 0.007±0.00 0.015±0.01 N/A 0.043±0.00 0.044±0.02 0.018±0.00 0.008±0.00 0.029±0.00 0.016±0.00 0.093±0.06 1.303±1.24 1.326±1.02
ENSMUST00000132970 0.030±0.00 N/A 0.018±0.00 0.019±0.00 0.070±0.00 0.097±0.00 N/A N/A N/A N/A N/A 0.065±0.03 1.215±0.28 0.448±0.00
ENSMUSG00000082165 ENSMUST00000116438 0.099±0.00 N/A 0.018±0.00 N/A N/A 0.143±0.01 0.071±0.00 N/A 0.013±0.00 N/A N/A 0.126±0.02 0.095±0.06 0.095±0.04

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