C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123358-ENSG00000123395 CGP 9606 12:52022832-52077494
GeneTranscriptPositionBiotype
ENSG00000123395 (ATG101)
autophagy related 101 		ENST00000336854 (ATG101-001) 52069971-52077494 protein_coding
ENST00000547409 (ATG101-003) 52069246-52070415 processed_transcript
ENST00000548915 (ATG101-007) 52070020-52076956 protein_coding
ENST00000550604 (ATG101-005) 52069987-52073903 protein_coding
ENST00000552544 (ATG101-004) 52069976-52073903 retained_intron
ENST00000552947 (ATG101-002) 52070012-52071434 retained_intron
ENST00000553049 (ATG101-006) 52070003-52077104 protein_coding
ENSG00000257663 (RP11-1100L3.7)
 ENST00000550301 (RP11-1100L3.7-001) 52076841-52082084 antisense
ENSG00000259884 (RP11-1100L3.8)
 ENST00000564363 (RP11-1100L3.8-001) 52058750-52059503 lincRNA
ENST00000564531 (RP11-1100L3.8-002) 52058459-52059332 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006JQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023034-ENSMUSG00000037204 CGP 10090 15:101266846-101290934
GeneTranscriptPositionBiotype
ENSMUSG00000023034 (Nr4a1)
nuclear receptor subfamily 4, group A, member 1 		ENSMUST00000023779 (Nr4a1-201) 101266846-101274792 protein_coding
ENSMUSG00000037204 (Atg101)
autophagy related 101 		ENSMUST00000048393 (Atg101-201) 101284301-101290934 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JQ_0001ENSG00000123395ENST00000336854ENST00000547409ENST00000548915ENST00000550604ENST00000552544ENST00000552947ENST00000553049ENSG00000257663ENST00000550301ENSG00000259884ENST00000564363ENST00000564531CIL_0006JQ_0002ENSMUSG00000023034ENSMUST00000023779ENSMUSG00000037204ENSMUST00000048393
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JQ_0001ENSG00000123395ENST00000336854ENST00000548915ENST00000550604ENST00000552544ENST00000552947ENSG00000257663ENST00000550301ENSG00000259884ENST00000564363ENST00000564531CIL_0006JQ_0002ENSMUSG00000023034ENSMUST00000023779ENSMUSG00000037204ENSMUST00000048393
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123395 ENST00000336854 1.968±0.00 3.689±0.00 1.686±0.00 4.733±2.42 1.946±0.01 0.796±0.00 1.666±0.00 2.630±0.00 2.786±0.05 4.537±0.00 1.537±0.84 7.030±3.08 7.053±0.90 10.246±0.00
ENST00000547409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548915 8.110±0.00 16.810±0.00 N/A 9.815±0.00 10.385±0.00 14.768±0.00 8.461±0.00 21.164±0.00 11.657±0.00 22.066±0.00 6.479±0.00 20.311±0.72 18.238±4.99 26.833±0.00
ENST00000550604 N/A N/A N/A N/A N/A 2.149±0.00 N/A 4.596±0.00 2.078±0.00 N/A 5.487±0.15 N/A N/A N/A
ENST00000552544 N/A N/A N/A 6.614±0.00 4.531±0.00 N/A N/A N/A 1.913±0.00 2.430±0.00 N/A 2.097±0.00 6.650±0.00 11.631±0.00
ENST00000552947 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.054±0.00 N/A 0.804±0.00 N/A N/A
ENST00000553049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257663 ENST00000550301 9.263±0.00 18.840±0.00 1.173±0.00 9.930±2.86 8.688±5.25 12.342±8.17 8.650±7.00 19.259±14.11 13.518±11.14 19.937±18.09 11.684±7.27 21.898±9.91 24.920±7.29 30.006±4.17
ENSG00000259884 ENST00000564363 86.671±0.00 15.464±0.00 N/A N/A 99.783±0.00 57.561±0.00 38.778±0.00 10.686±0.00 N/A 224.734±0.00 60.688±0.00 42.823±0.00 20.270±14.19 44.107±30.40
ENST00000564531 N/A N/A N/A N/A N/A N/A 48.373±0.00 12.178±0.00 N/A 324.305±0.00 72.533±0.00 N/A 27.979±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023034 ENSMUST00000023779 2.730±0.60 54.570±20.78 4.339±1.28 2.903±2.47 8.439±2.51 5.792±0.70 4.307±2.01 1.227±0.28 0.314±0.10 13.810±1.66 19.010±18.29 23.299±13.58 2.039±1.90 17.155±7.48
ENSMUSG00000037204 ENSMUST00000048393 16.750±1.69 19.888±1.88 21.598±5.56 25.711±4.70 14.093±4.19 30.594±1.42 12.082±1.30 20.557±2.95 21.498±6.03 18.580±2.73 22.218±2.61 23.002±5.49 22.615±2.84 8.187±1.50

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