C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006LG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073841-ENSDARG00000061303 CGP 7955 6:37701129-37985706
GeneTranscriptPositionBiotype
ENSDARG00000073841 (herc2)
hect domain and RLD 2
ENSDART00000110770 (herc2-201) 37703111-37798075 protein_coding
ENSDART00000154364 (herc2-001) 37701129-37730316 protein_coding
CIL_0006LG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030451-ENSMUSG00000030450 CGP 10090 7:56050155-56536517
GeneTranscriptPositionBiotype
ENSMUSG00000030450 (Oca2)
oculocutaneous albinism II
ENSMUST00000032633 (Oca2-001) 56239760-56536517 protein_coding
ENSMUST00000144739 (Oca2-004) 56239808-56536513 nonsense_mediated_decay
ENSMUST00000152693 (Oca2-002) 56239777-56536265 nonsense_mediated_decay
ENSMUST00000154559 (Oca2-006) 56306238-56323632 processed_transcript
ENSMUST00000155533 (Oca2-003) 56239761-56254966 processed_transcript
ENSMUST00000156886 (Oca2-005) 56239781-56280796 protein_coding
ENSMUSG00000030451 (Herc2)
hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
ENSMUST00000076226 (Herc2-201) 56050155-56231794 protein_coding
ENSMUST00000164095 (Herc2-202) 56050389-56231763 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LG_0001ENSDARG00000073841ENSDART00000110770ENSDART00000154364CIL_0006LG_0002ENSMUSG00000030450ENSMUST00000032633ENSMUST00000144739ENSMUST00000152693ENSMUST00000154559ENSMUST00000155533ENSMUST00000156886ENSMUSG00000030451ENSMUST00000076226ENSMUST00000164095
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LG_0001ENSDARG00000073841ENSDART00000110770CIL_0006LG_0002ENSMUSG00000030450ENSMUST00000032633ENSMUST00000144739ENSMUST00000152693ENSMUST00000156886ENSMUSG00000030451ENSMUST00000076226ENSMUST00000164095
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000073841 ENSDART00000110770 N/A N/A N/A 6.511±0.00 N/A N/A 3.122±1.39 3.307±1.83 N/A N/A N/A N/A N/A N/A
ENSDART00000154364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030450 ENSMUST00000032633 N/A 2.600±0.49 N/A 0.091±0.04 N/A N/A N/A N/A N/A N/A N/A 2.633±1.71 0.015±0.00 0.135±0.08
ENSMUST00000144739 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152693 N/A N/A 0.006±0.00 0.112±0.04 0.032±0.00 N/A 0.011±0.00 0.024±0.00 N/A N/A N/A 1.669±0.99 0.002±0.00 0.177±0.03
ENSMUST00000154559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156886 N/A 1.908±0.51 N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A N/A 4.089±0.49 N/A N/A
ENSMUSG00000030451 ENSMUST00000076226 2.598±1.13 2.138±0.96 6.296±1.16 6.309±1.80 2.337±1.04 1.481±0.65 1.937±0.29 2.190±0.71 1.600±1.00 4.339±1.15 4.461±1.23 4.502±1.98 3.921±1.50 4.401±1.52
ENSMUST00000164095 2.649±0.29 3.306±1.79 N/A 16.740±0.00 3.208±1.00 3.477±0.26 1.823±0.34 2.072±0.81 1.392±0.74 2.294±0.81 2.405±0.80 6.004±2.86 7.526±2.76 5.565±0.76

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