C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006NQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106178-ENSG00000005486 CGP 9606 7:75811665-75888926
GeneTranscriptPositionBiotype
ENSG00000005486 (RHBDD2)
rhomboid domain containing 2 		ENST00000006777 (RHBDD2-001) 75878948-75888921 protein_coding
ENST00000318622 (RHBDD2-201) 75878999-75888926 protein_coding
ENST00000428119 (RHBDD2-002) 75882044-75888921 protein_coding
ENST00000454791 (RHBDD2-006) 75879004-75888884 nonsense_mediated_decay
ENST00000466232 (RHBDD2-003) 75842602-75882124 processed_transcript
ENST00000467406 (RHBDD2-009) 75883490-75888268 processed_transcript
ENST00000468304 (RHBDD2-005) 75879172-75888583 processed_transcript
ENST00000468644 (RHBDD2-004) 75878091-75882165 processed_transcript
ENST00000476218 (RHBDD2-008) 75879140-75880305 processed_transcript
ENST00000613112 (RHBDD2-202) 75878948-75888926 protein_coding
ENST00000614848 (RHBDD2-203) 75878948-75888920 protein_coding
ENSG00000106178 (CCL24)
chemokine (C-C motif) ligand 24 		ENST00000222902 (CCL24-001) 75811665-75813806 protein_coding
ENST00000416943 (CCL24-002) 75811665-75823356 protein_coding
ENSG00000219039 (AC005102.1)
 ENST00000403118 (AC005102.1-001) 75835663-75836141 processed_pseudogene
CIL_0006NQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004814-ENSMUSG00000039917 CGP 10090 5:135569937-135646448
GeneTranscriptPositionBiotype
ENSMUSG00000004814 (Ccl24)
chemokine (C-C motif) ligand 24 		ENSMUST00000004936 (Ccl24-201) 135569937-135573043 protein_coding
ENSMUSG00000039917 (Rhbdd2)
rhomboid domain containing 2 		ENSMUST00000043707 (Rhbdd2-001) 135632618-135646376 protein_coding
ENSMUST00000084599 (Rhbdd2-003) 135636532-135644527 retained_intron
ENSMUST00000129134 (Rhbdd2-005) 135632723-135636545 processed_transcript
ENSMUST00000130647 (Rhbdd2-006) 135632704-135637618 processed_transcript
ENSMUST00000136748 (Rhbdd2-002) 135632654-135646448 nonsense_mediated_decay
ENSMUST00000144633 (Rhbdd2-004) 135632716-135635615 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NQ_0001ENSG00000005486ENST00000006777ENST00000318622ENST00000428119ENST00000454791ENST00000466232ENST00000467406ENST00000468304ENST00000468644ENST00000476218ENST00000613112ENST00000614848ENSG00000106178ENST00000222902ENST00000416943ENSG00000219039ENST00000403118CIL_0006NQ_0002ENSMUSG00000004814ENSMUST00000004936ENSMUSG00000039917ENSMUST00000043707ENSMUST00000084599ENSMUST00000129134ENSMUST00000130647ENSMUST00000136748ENSMUST00000144633
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NQ_0001ENSG00000005486ENST00000006777ENST00000318622ENST00000428119ENST00000454791ENST00000466232ENST00000467406ENST00000468644ENST00000613112ENST00000614848ENSG00000106178ENST00000222902ENST00000416943ENSG00000219039ENST00000403118CIL_0006NQ_0002ENSMUSG00000004814ENSMUST00000004936ENSMUSG00000039917ENSMUST00000043707ENSMUST00000084599ENSMUST00000129134ENSMUST00000136748
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005486 ENST00000006777 N/A N/A N/A 9.813±0.00 N/A N/A 0.109±0.00 0.148±0.00 N/A 0.535±0.00 N/A 13.713±4.31 6.348±0.00 N/A
ENST00000318622 N/A 6.084±0.00 N/A N/A 1.215±0.00 N/A N/A N/A 0.867±0.00 1.401±0.00 N/A 28.098±0.00 N/A 11.106±0.05
ENST00000428119 17.384±0.00 29.607±0.00 N/A 49.491±0.00 18.653±0.00 8.283±0.00 3.198±0.00 7.658±6.80 19.154±0.00 25.120±0.00 13.932±0.00 28.287±4.27 19.205±1.15 28.081±5.73
ENST00000454791 7.305±0.00 N/A 0.355±0.00 N/A 6.078±0.00 2.747±0.00 2.462±0.00 15.255±0.00 6.795±0.00 11.581±0.00 N/A 10.262±0.00 7.505±0.60 15.777±5.75
ENST00000466232 N/A N/A 0.311±0.00 N/A N/A 0.293±0.00 0.212±0.00 N/A N/A 1.332±0.00 1.350±0.00 N/A N/A N/A
ENST00000467406 N/A N/A N/A N/A N/A N/A 0.716±0.00 N/A N/A N/A 3.231±0.00 2.138±0.00 N/A N/A
ENST00000468304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468644 N/A N/A N/A N/A N/A 0.752±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613112 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614848 14.327±0.00 12.979±0.00 N/A 65.801±0.00 13.772±0.00 10.019±0.00 2.825±2.71 14.652±14.50 23.122±0.00 16.923±16.36 15.838±0.00 18.589±8.02 20.658±2.01 8.241±0.00
ENSG00000106178 ENST00000222902 N/A 2.937±0.00 N/A N/A 2.127±0.00 N/A 0.016±0.00 N/A N/A 0.265±0.00 N/A 0.973±0.00 0.111±0.00 0.062±0.00
ENST00000416943 0.458±0.00 N/A N/A N/A 2.287±0.00 1.686±1.28 0.061±0.00 N/A 0.338±0.00 0.163±0.00 N/A 2.405±0.00 0.015±0.00 0.063±0.00
ENSG00000219039 ENST00000403118 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 0.108±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004814 ENSMUST00000004936 4.270±1.25 0.861±0.15 3.233±0.54 0.154±0.08 6.508±1.00 0.297±0.10 1.093±0.21 0.310±0.10 3.324±1.97 0.603±0.21 0.550±0.20 0.478±0.25 0.221±0.23 0.080±0.02
ENSMUSG00000039917 ENSMUST00000043707 5.529±1.58 27.517±2.84 4.669±0.07 3.166±1.07 9.808±3.72 6.656±1.26 3.461±1.09 11.821±2.27 2.978±1.10 10.043±1.51 1.127±0.14 13.918±6.48 3.352±1.22 5.322±3.22
ENSMUST00000084599 1.897±0.28 N/A 2.862±0.15 1.630±0.75 2.658±0.27 1.767±0.36 0.708±0.09 1.826±0.21 0.876±0.16 1.988±0.33 0.240±0.07 2.682±0.96 1.950±0.52 1.257±0.57
ENSMUST00000129134 6.163±0.00 25.425±2.25 N/A N/A N/A 4.867±0.50 N/A N/A 2.558±0.49 7.957±0.10 1.787±0.00 11.542±1.95 5.582±1.28 12.570±1.42
ENSMUST00000130647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136748 1.634±0.00 N/A N/A 2.082±0.43 1.604±0.00 N/A N/A N/A N/A N/A N/A 1.458±0.00 N/A 5.482±0.00
ENSMUST00000144633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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