C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006OH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186675-ENSG00000102390 CGP 9606 X:75782988-76178204
GeneTranscriptPositionBiotype
ENSG00000102390 (PBDC1)
polysaccharide biosynthesis domain containing 1
ENST00000373357 (PBDC1-002) 76173040-76178196 protein_coding
ENST00000373358 (PBDC1-001) 76172936-76178204 protein_coding
ENSG00000186675 (MAGEE2)
melanoma antigen family E, 2
ENST00000373359 (MAGEE2-001) 75782988-75785236 protein_coding
ENSG00000226753 (RP11-212D3.2)
ENST00000450005 (RP11-212D3.2-001) 75888700-75888888 processed_pseudogene
ENSG00000226854 (RP11-212D3.4)
ENST00000413763 (RP11-212D3.4-001) 75903105-75904858 lincRNA
ENSG00000232332 (RP3-481A17.1)
ENST00000451247 (RP3-481A17.1-001) 76029895-76030330 processed_pseudogene
ENSG00000233063 (SAR1AP4)
SAR1 homolog A (S. cerevisiae) pseudogene 4
ENST00000429225 (SAR1AP4-001) 75884546-75885136 processed_pseudogene
CIL_0006OH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031224-ENSMUSG00000031226 CGP 10090 X:104854952-105117090
GeneTranscriptPositionBiotype
ENSMUSG00000031224 (Magee2)
melanoma antigen, family E, 2
ENSMUST00000033575 (Magee2-001) 104854952-104857267 protein_coding
ENSMUSG00000031226 (Pbdc1)
polysaccharide biosynthesis domain containing 1
ENSMUST00000033577 (Pbdc1-001) 105079756-105085186 protein_coding
ENSMUST00000119477 (Pbdc1-003) 105079761-105117090 protein_coding
ENSMUST00000125343 (Pbdc1-002) 105079775-105083160 retained_intron
ENSMUSG00000081703 (Gm6285)
predicted gene 6285
ENSMUST00000122012 (Gm6285-001) 104947785-104948282 processed_pseudogene
ENSMUSG00000082600 (Gm9673)
predicted gene 9673
ENSMUST00000119287 (Gm9673-001) 105032586-105033366 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OH_0001ENSG00000102390ENST00000373357ENST00000373358ENSG00000186675ENST00000373359ENSG00000226753ENST00000450005ENSG00000226854ENST00000413763ENSG00000232332ENST00000451247ENSG00000233063ENST00000429225CIL_0006OH_0002ENSMUSG00000031224ENSMUST00000033575ENSMUSG00000031226ENSMUST00000033577ENSMUST00000119477ENSMUST00000125343ENSMUSG00000081703ENSMUST00000122012ENSMUSG00000082600ENSMUST00000119287
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OH_0001ENSG00000102390ENST00000373357ENST00000373358ENSG00000186675ENST00000373359ENSG00000226753ENST00000450005ENSG00000226854ENST00000413763ENSG00000232332ENST00000451247ENSG00000233063ENST00000429225CIL_0006OH_0002ENSMUSG00000031224ENSMUST00000033575ENSMUSG00000031226ENSMUST00000033577ENSMUST00000119477ENSMUSG00000081703ENSMUST00000122012ENSMUSG00000082600ENSMUST00000119287
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102390 ENST00000373357 9.968±0.00 7.588±0.00 N/A 3.809±0.00 4.456±4.23 7.170±0.00 0.729±0.00 N/A 1.626±0.00 1.223±0.54 0.027±0.00 4.539±0.00 N/A 6.901±0.00
ENST00000373358 3.367±0.00 11.711±0.00 1.664±0.00 2.004±1.53 3.172±2.65 4.212±3.19 2.227±1.93 6.473±5.53 3.396±2.52 4.771±0.00 4.999±0.00 12.737±8.16 11.161±2.47 6.167±1.38
ENSG00000186675 ENST00000373359 0.012±0.00 N/A 0.052±0.00 1.117±0.01 0.058±0.05 0.171±0.08 0.017±0.00 0.043±0.00 0.132±0.12 0.005±0.00 N/A 0.071±0.06 0.019±0.00 0.069±0.05
ENSG00000226753 ENST00000450005 N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A
ENSG00000226854 ENST00000413763 0.011±0.00 0.183±0.00 N/A 0.161±0.04 0.298±0.23 N/A 0.128±0.00 0.068±0.00 0.030±0.00 0.102±0.00 N/A 0.031±0.00 0.026±0.00 0.094±0.01
ENSG00000232332 ENST00000451247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A
ENSG00000233063 ENST00000429225 N/A N/A 0.221±0.00 0.020±0.00 0.505±0.00 N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031224 ENSMUST00000033575 0.054±0.03 0.124±0.08 0.126±0.00 3.464±1.47 0.108±0.04 0.138±0.07 0.014±0.00 0.030±0.01 0.083±0.03 0.046±0.02 0.014±0.00 0.294±0.12 0.215±0.11 0.032±0.01
ENSMUSG00000031226 ENSMUST00000033577 1.234±0.69 1.133±0.30 2.497±0.65 2.653±0.43 0.921±0.32 1.037±0.36 0.559±0.06 0.911±0.24 3.630±3.43 1.241±0.19 1.063±0.17 2.237±1.72 5.754±2.48 1.419±1.56
ENSMUST00000119477 5.768±4.88 5.891±1.77 2.781±0.71 2.161±0.99 3.640±1.90 7.480±1.09 1.982±0.49 5.266±2.53 2.610±2.20 4.735±1.91 1.009±0.19 8.417±4.54 4.645±1.50 2.377±1.00
ENSMUST00000125343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081703 ENSMUST00000122012 0.087±0.00 N/A 0.117±0.03 N/A 0.102±0.00 N/A N/A N/A 0.115±0.00 N/A N/A 0.185±0.10 0.143±0.08 N/A
ENSMUSG00000082600 ENSMUST00000119287 0.042±0.00 N/A 0.066±0.02 0.026±0.01 0.075±0.02 N/A N/A 0.047±0.00 0.050±0.01 0.158±0.00 N/A 0.287±0.00 0.073±0.04 N/A

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