C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178568-ENSG00000030419 CGP 9606 2:211375717-213152427
GeneTranscriptPositionBiotype
ENSG00000030419 (IKZF2)
IKAROS family zinc finger 2 (Helios) 		ENST00000342002 (IKZF2-002) 213005363-213150334 protein_coding
ENST00000374319 (IKZF2-003) 213007172-213151603 protein_coding
ENST00000374326 (IKZF2-009) 213007357-213148629 nonsense_mediated_decay
ENST00000374327 (IKZF2-201) 213007360-213148629 protein_coding
ENST00000412444 (IKZF2-006) 213007357-213148629 nonsense_mediated_decay
ENST00000413091 (IKZF2-202) 213007360-213148629 protein_coding
ENST00000421754 (IKZF2-203) 213007360-213148629 protein_coding
ENST00000431520 (IKZF2-011) 213007360-213148629 nonsense_mediated_decay
ENST00000433134 (IKZF2-014) 213049850-213150408 protein_coding
ENST00000434687 (IKZF2-001) 213005363-213151603 protein_coding
ENST00000439848 (IKZF2-008) 213007357-213148629 nonsense_mediated_decay
ENST00000442445 (IKZF2-004) 213147372-213150241 protein_coding
ENST00000451136 (IKZF2-204) 212999691-213151609 protein_coding
ENST00000452786 (IKZF2-013) 213056989-213152427 protein_coding
ENST00000453575 (IKZF2-005) 213007353-213148629 nonsense_mediated_decay
ENST00000457361 (IKZF2-205) 212999691-213151609 protein_coding
ENST00000484040 (IKZF2-012) 213006039-213015278 retained_intron
ENSG00000178568 (ERBB4)
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 		ENST00000260943 (ERBB4-004) 211619253-212538529 protein_coding
ENST00000342788 (ERBB4-001) 211375717-212538841 protein_coding
ENST00000402597 (ERBB4-201) 211375717-212124915 protein_coding
ENST00000435846 (ERBB4-005) 211750699-212429247 protein_coding
ENST00000436443 (ERBB4-002) 211375721-212538841 protein_coding
ENST00000459774 (ERBB4-007) 212124584-212125181 retained_intron
ENST00000463121 (ERBB4-008) 211657597-211665354 processed_transcript
ENST00000484474 (ERBB4-006) 211725152-211960762 processed_transcript
ENST00000484594 (ERBB4-003) 211561762-212538582 retained_intron
ENSG00000221388 (AC093865.1)
 ENST00000408461 (AC093865.1-201) 212763570-212763675 miRNA
ENSG00000223373 (AC108066.1)
 ENST00000437261 (AC108066.1-001) 212911003-212919809 lincRNA
ENSG00000231254 (PCED1CP)
PC-esterase domain containing 1C, pseudogene 		ENST00000419887 (PCED1CP-001) 212832161-212832945 processed_pseudogene
ENSG00000232631 (MTND2P23)
MT-ND2 pseudogene 23 		ENST00000422990 (MTND2P23-001) 211777206-211777856 processed_pseudogene
ENSG00000234308 (AC093381.2)
 ENST00000434559 (AC093381.2-002) 212795331-212796720 lincRNA
ENST00000453965 (AC093381.2-001) 212795340-212819264 lincRNA
ENSG00000236007 (AC105921.5)
 ENST00000451639 (AC105921.5-001) 211778273-211779763 processed_pseudogene
ENSG00000273118 (AC079610.1)
 ENST00000415387 (AC079610.1-001) 212581357-213021545 sense_overlapping
CIL_0006PA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062209-ENSMUSG00000025997 CGP 10090 1:68032186-69687245
GeneTranscriptPositionBiotype
ENSMUSG00000025997 (Ikzf2)
IKAROS family zinc finger 2 		ENSMUST00000027146 (Ikzf2-001) 69531214-69685821 protein_coding
ENSMUST00000187184 (Ikzf2-003) 69538582-69687245 protein_coding
ENSMUST00000187870 (Ikzf2-004) 69681558-69684536 retained_intron
ENSMUST00000188110 (Ikzf2-007) 69538768-69684157 protein_coding
ENSMUST00000188919 (Ikzf2-002) 69681559-69687140 retained_intron
ENSMUST00000190016 (Ikzf2-010) 69577890-69685300 protein_coding
ENSMUST00000190771 (Ikzf2-005) 69538037-69685886 protein_coding
ENSMUST00000190855 (Ikzf2-006) 69538768-69684157 protein_coding
ENSMUST00000191262 (Ikzf2-009) 69538768-69684157 protein_coding
ENSMUSG00000062209 (Erbb4)
v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 		ENSMUST00000119142 (Erbb4-002) 68032186-69107756 protein_coding
ENSMUST00000121473 (Erbb4-001) 68032186-69108059 protein_coding
ENSMUST00000126682 (Erbb4-003) 68298150-68330216 retained_intron
ENSMUST00000131148 (Erbb4-005) 68290155-68298318 processed_transcript
ENSMUST00000153432 (Erbb4-004) 68250655-69107756 protein_coding
ENSMUSG00000083795 (Gm15670)
predicted gene 15670 		ENSMUST00000117740 (Gm15670-001) 68293280-68293726 processed_pseudogene
ENSMUSG00000084332 (Gm8840)
predicted gene 8840 		ENSMUST00000122454 (Gm8840-001) 69130914-69131299 processed_pseudogene
ENSMUSG00000087514 (Gm16076)
predicted gene 16076 		ENSMUST00000140116 (Gm16076-001) 69091913-69106740 sense_intronic
ENSMUSG00000099804 (RP24-280N11.1)
predicted gene 28497 		ENSMUST00000189646 (RP24-280N11.1-001) 69441056-69444084 lincRNA
ENSMUSG00000099954 (RP23-471L1.5)
predicted gene 28112 		ENSMUST00000190898 (RP23-471L1.5-001) 69660187-69662061 sense_intronic
ENSMUSG00000100354 (RP23-471L1.1)
predicted gene 29113 		ENSMUST00000185991 (RP23-471L1.1-001) 69490357-69493788 lincRNA
ENSMUSG00000100815 (RP23-471L1.3)
predicted gene 29112 		ENSMUST00000188962 (RP23-471L1.3-001) 69595036-69598522 sense_intronic
ENSMUSG00000101387 (Pced1c-ps)
PC-esterase domain containing 1C, pseudogene 		ENSMUST00000187740 (Pced1c-ps-001) 69377321-69378071 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PA_0001ENSG00000030419ENST00000342002ENST00000374319ENST00000374326ENST00000374327ENST00000412444ENST00000413091ENST00000421754ENST00000431520ENST00000433134ENST00000434687ENST00000439848ENST00000442445ENST00000451136ENST00000452786ENST00000453575ENST00000457361ENST00000484040ENSG00000178568ENST00000260943ENST00000342788ENST00000402597ENST00000435846ENST00000436443ENST00000459774ENST00000463121ENST00000484474ENST00000484594ENSG00000221388ENST00000408461ENSG00000223373ENST00000437261ENSG00000231254ENST00000419887ENSG00000232631ENST00000422990ENSG00000234308ENST00000434559ENST00000453965ENSG00000236007ENST00000451639ENSG00000273118ENST00000415387CIL_0006PA_0002ENSMUSG00000025997ENSMUST00000027146ENSMUST00000187184ENSMUST00000187870ENSMUST00000188110ENSMUST00000188919ENSMUST00000190016ENSMUST00000190771ENSMUST00000190855ENSMUST00000191262ENSMUSG00000062209ENSMUST00000119142ENSMUST00000121473ENSMUST00000126682ENSMUST00000131148ENSMUST00000153432ENSMUSG00000083795ENSMUST00000117740ENSMUSG00000084332ENSMUST00000122454ENSMUSG00000087514ENSMUST00000140116ENSMUSG00000099804ENSMUST00000189646ENSMUSG00000099954ENSMUST00000190898ENSMUSG00000100354ENSMUST00000185991ENSMUSG00000100815ENSMUST00000188962ENSMUSG00000101387ENSMUST00000187740
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PA_0001ENSG00000030419ENST00000342002ENST00000433134ENST00000434687ENST00000451136ENST00000484040ENSG00000178568ENST00000260943ENST00000342788ENST00000402597ENST00000436443ENST00000459774ENST00000484594ENSG00000221388ENST00000408461ENSG00000223373ENST00000437261ENSG00000231254ENST00000419887ENSG00000232631ENST00000422990ENSG00000234308ENST00000434559ENST00000453965ENSG00000236007ENST00000451639ENSG00000273118ENST00000415387CIL_0006PA_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000030419 ENST00000342002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A
ENST00000374319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.659±0.00 2.116±0.00 N/A N/A
ENST00000434687 N/A N/A 0.576±0.00 0.349±0.00 N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A
ENST00000439848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451136 N/A N/A N/A 0.284±0.00 N/A N/A 0.272±0.00 N/A N/A N/A N/A N/A N/A 0.337±0.00
ENST00000452786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484040 N/A N/A N/A N/A 0.842±0.00 N/A N/A N/A 1.141±0.00 N/A 0.246±0.00 0.841±0.00 N/A N/A
ENSG00000178568 ENST00000260943 N/A N/A N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A 1.395±0.00 N/A 0.029±0.02 N/A
ENST00000342788 N/A N/A 1.749±0.00 0.796±0.00 N/A N/A N/A N/A N/A N/A 0.220±0.00 0.089±0.00 N/A 0.677±0.29
ENST00000402597 N/A 0.062±0.00 N/A 1.396±0.00 0.331±0.07 0.052±0.03 N/A 0.352±0.34 0.002±0.00 0.205±0.00 0.314±0.00 0.084±0.00 0.014±0.01 0.256±0.08
ENST00000435846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436443 N/A N/A N/A 1.945±0.00 N/A N/A 0.180±0.00 2.074±0.00 0.001±0.00 N/A 0.522±0.00 0.429±0.00 N/A 0.529±0.35
ENST00000459774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A
ENST00000463121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484594 N/A N/A 2.668±0.00 N/A 0.516±0.00 0.121±0.00 N/A N/A 0.554±0.00 N/A N/A 0.203±0.00 N/A N/A
ENSG00000221388 ENST00000408461 N/A 0.089±0.00 N/A 0.084±0.00 N/A 0.075±0.00 N/A 0.246±0.00 0.241±0.00 0.062±0.00 N/A N/A N/A 0.160±0.00
ENSG00000223373 ENST00000437261 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A 0.018±0.00 N/A N/A N/A N/A N/A
ENSG00000231254 ENST00000419887 N/A N/A N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A N/A
ENSG00000232631 ENST00000422990 N/A N/A N/A N/A 0.696±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234308 ENST00000434559 N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A 0.414±0.00 N/A N/A N/A N/A 0.482±0.00
ENST00000453965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.11
ENSG00000236007 ENST00000451639 N/A N/A N/A 0.327±0.00 0.052±0.00 N/A 0.174±0.17 0.008±0.00 0.058±0.00 N/A N/A N/A N/A N/A
ENSG00000273118 ENST00000415387 N/A N/A N/A 0.079±0.00 N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A 0.053±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025997 ENSMUST00000027146 0.491±0.22 0.200±0.00 5.840±0.74 0.457±0.30 1.020±0.36 0.580±0.13 0.212±0.08 0.290±0.11 0.090±0.06 0.789±0.21 0.176±0.02 0.618±0.11 0.089±0.05 0.103±0.00
ENSMUST00000187184 N/A N/A N/A N/A N/A 0.335±0.00 N/A N/A 0.026±0.00 N/A N/A 0.658±0.37 N/A 0.089±0.04
ENSMUST00000187870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188110 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A
ENSMUST00000188919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190016 N/A N/A N/A N/A N/A N/A 3.020±0.00 N/A N/A N/A N/A 4.060±0.55 N/A N/A
ENSMUST00000190771 0.235±0.00 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.439±0.14 N/A N/A
ENSMUST00000190855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191262 N/A 0.312±0.02 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A 0.411±0.00 0.164±0.00 N/A
ENSMUSG00000062209 ENSMUST00000119142 0.016±0.00 0.074±0.00 N/A 0.706±0.28 0.184±0.00 0.011±0.00 0.397±0.13 0.334±0.16 0.051±0.06 0.086±0.02 0.025±0.01 0.038±0.01 0.003±0.00 0.071±0.03
ENSMUST00000121473 0.029±0.00 0.079±0.03 0.029±0.00 1.756±0.39 0.135±0.06 N/A 0.211±0.00 0.937±0.30 0.126±0.08 0.084±0.03 N/A 0.094±0.05 0.000±0.00 0.055±0.00
ENSMUST00000126682 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A
ENSMUST00000131148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153432 0.020±0.00 N/A N/A N/A N/A N/A 0.818±0.00 N/A 0.107±0.09 0.119±0.03 0.029±0.00 N/A N/A 0.091±0.02
ENSMUSG00000083795 ENSMUST00000117740 N/A N/A N/A N/A N/A N/A N/A 0.137±0.01 N/A N/A N/A N/A N/A N/A
ENSMUSG00000084332 ENSMUST00000122454 N/A N/A N/A N/A N/A N/A 0.328±0.00 0.168±0.00 N/A N/A N/A N/A 0.180±0.00 N/A
ENSMUSG00000087514 ENSMUST00000140116 N/A N/A 0.050±0.00 0.188±0.00 N/A N/A 0.080±0.00 N/A 0.156±0.06 N/A N/A N/A 0.016±0.00 0.089±0.00
ENSMUSG00000099804 ENSMUST00000189646 N/A N/A 2.394±0.52 0.005±0.00 0.017±0.00 0.138±0.04 0.011±0.00 0.022±0.01 0.008±0.01 0.051±0.00 N/A 0.052±0.04 0.022±0.01 0.014±0.00
ENSMUSG00000099954 ENSMUST00000190898 0.047±0.04 0.147±0.04 0.506±0.12 0.124±0.04 0.103±0.07 0.108±0.03 0.058±0.04 0.073±0.02 0.036±0.02 0.064±0.03 N/A 0.112±0.12 0.034±0.00 0.056±0.00
ENSMUSG00000100354 ENSMUST00000185991 0.027±0.00 0.033±0.00 0.089±0.00 0.016±0.01 0.091±0.04 N/A 0.016±0.00 0.020±0.01 N/A 0.027±0.00 0.010±0.00 0.033±0.02 0.005±0.00 N/A
ENSMUSG00000100815 ENSMUST00000188962 N/A N/A 0.091±0.02 0.035±0.01 0.043±0.00 0.052±0.00 0.017±0.00 0.016±0.00 0.005±0.00 0.028±0.01 0.008±0.00 0.092±0.00 0.014±0.00 0.010±0.01
ENSMUSG00000101387 ENSMUST00000187740 N/A 0.059±0.00 0.104±0.07 0.023±0.00 0.083±0.00 N/A N/A 0.060±0.01 0.012±0.00 0.042±0.00 N/A 0.148±0.07 1.004±0.75 0.275±0.10

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