C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006PN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000243501-ENSG00000243501 CGP 9606 6:73209746-73263196
GeneTranscriptPositionBiotype
ENSG00000256980 (KHDC1L)
KH homology domain containing 1-like
ENST00000370388 (KHDC1L-001) 73223544-73225452 protein_coding
ENST00000471312 (KHDC1L-002) 73224256-73225770 processed_transcript
CIL_0006PN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000256980-ENSG00000135314 CGP 9606 6:73223544-73310365
GeneTranscriptPositionBiotype
ENSG00000229852 (RP11-398K22.12)
ENST00000421315 (RP11-398K22.12-001) 73268051-73291340 antisense
ENST00000441363 (RP11-398K22.12-003) 73263359-73301401 antisense
ENST00000442007 (RP11-398K22.12-002) 73263215-73276517 antisense
ENSG00000234882 (EIF3EP1)
eukaryotic translation initiation factor 3, subunit E pseudogene 1
ENST00000433978 (EIF3EP1-001) 73291962-73293277 processed_pseudogene
ENSG00000239626 (RPSAP41)
ribosomal protein SA pseudogene 41
ENST00000439695 (RPSAP41-001) 73290403-73291262 processed_pseudogene
ENSG00000256980 (KHDC1L)
KH homology domain containing 1-like
ENST00000370388 (KHDC1L-001) 73223544-73225452 protein_coding
ENST00000471312 (KHDC1L-002) 73224256-73225770 processed_transcript
CIL_0006PN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041722-ENSMUSG00000085079 CGP 10090 1:21368331-21386373
GeneTranscriptPositionBiotype
ENSMUSG00000041722 (Khdc1c)
KH domain containing 1C
ENSMUST00000070223 (Khdc1c-001) 21368331-21370845 protein_coding
ENSMUSG00000085079 (Khdc1b)
KH domain containing 1B
ENSMUST00000147615 (Khdc1b-001) 21383556-21386373 protein_coding
ENSMUSG00000085507 (Gm2709)
predicted gene 2709
ENSMUST00000142979 (Gm2709-001) 21372670-21373764 unprocessed_pseudogene
CIL_0006PN_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067750-ENSMUSG00000041722 CGP 10090 1:21349641-21370845
GeneTranscriptPositionBiotype
ENSMUSG00000041722 (Khdc1c)
KH domain containing 1C
ENSMUST00000070223 (Khdc1c-001) 21368331-21370845 protein_coding
ENSMUSG00000067750 (Khdc1a)
KH domain containing 1A
ENSMUST00000088407 (Khdc1a-001) 21349641-21352200 protein_coding
ENSMUSG00000086194 (Gm16329)
predicted gene 16329
ENSMUST00000148174 (Gm16329-001) 21354005-21355116 unprocessed_pseudogene
ENSMUSG00000094436 (Gm16327)
predicted gene 16327
ENSMUST00000137146 (Gm16327-001) 21364803-21365030 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PN_0001ENSG00000256980ENST00000370388ENST00000471312CIL_0006PN_0002ENSG00000229852ENST00000421315ENST00000441363ENST00000442007ENSG00000234882ENST00000433978ENSG00000239626ENST00000439695ENSG00000256980ENST00000370388ENST00000471312CIL_0006PN_0003ENSMUSG00000041722ENSMUST00000070223ENSMUSG00000085079ENSMUST00000147615ENSMUSG00000085507ENSMUST00000142979CIL_0006PN_0004ENSMUSG00000041722ENSMUST00000070223ENSMUSG00000067750ENSMUST00000088407ENSMUSG00000086194ENSMUST00000148174ENSMUSG00000094436ENSMUST00000137146
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PN_0001ENSG00000256980ENST00000370388CIL_0006PN_0002ENSG00000229852ENST00000421315ENST00000441363ENST00000442007ENSG00000234882ENST00000433978ENSG00000239626ENST00000439695ENSG00000256980ENST00000370388CIL_0006PN_0003ENSMUSG00000041722ENSMUST00000070223ENSMUSG00000085079ENSMUST00000147615ENSMUSG00000085507ENSMUST00000142979CIL_0006PN_0004ENSMUSG00000041722ENSMUST00000070223ENSMUSG00000067750ENSMUST00000088407ENSMUSG00000086194ENSMUST00000148174ENSMUSG00000094436ENSMUST00000137146
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000256980 ENST00000370388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.221±0.59 N/A
ENST00000471312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000229852 ENST00000421315 0.150±0.00 0.228±0.00 N/A 0.682±0.07 0.328±0.00 0.135±0.04 0.111±0.00 0.139±0.08 0.080±0.00 0.172±0.08 0.007±0.00 0.359±0.23 0.060±0.04 0.415±0.02
ENST00000441363 0.117±0.00 0.176±0.00 N/A 1.987±0.40 0.260±0.00 0.644±0.00 0.118±0.00 0.089±0.03 1.069±0.00 0.545±0.31 0.013±0.00 0.825±0.50 0.234±0.05 0.541±0.10
ENST00000442007 0.228±0.00 0.613±0.00 N/A N/A 0.570±0.00 N/A 0.229±0.00 0.220±0.00 0.110±0.00 0.255±0.00 0.015±0.00 0.352±0.00 0.186±0.11 1.020±0.38
ENSG00000234882 ENST00000433978 0.378±0.00 0.768±0.00 0.239±0.00 1.147±0.04 0.485±0.22 0.462±0.29 0.067±0.05 0.419±0.00 0.284±0.23 0.131±0.06 0.076±0.00 0.691±0.40 0.210±0.10 1.100±0.03
ENSG00000239626 ENST00000439695 N/A 0.414±0.00 N/A N/A 0.202±0.00 0.941±0.00 N/A N/A 1.065±0.00 N/A N/A 0.553±0.00 N/A N/A
ENSG00000256980 ENST00000370388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.221±0.59 N/A
ENST00000471312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041722 ENSMUST00000070223 0.073±0.04 N/A 0.042±0.00 0.015±0.00 0.042±0.00 N/A N/A N/A 0.005±0.00 0.030±0.00 0.017±0.00 0.681±0.34 0.290±0.27 0.072±0.00
ENSMUSG00000085079 ENSMUST00000147615 0.073±0.03 N/A 0.032±0.02 0.012±0.00 0.030±0.01 0.052±0.01 0.014±0.00 N/A 0.003±0.00 0.030±0.01 N/A 5.534±1.24 0.268±0.32 0.017±0.01
ENSMUSG00000085507 ENSMUST00000142979 N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A N/A N/A 0.272±0.00 0.205±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041722 ENSMUST00000070223 0.073±0.04 N/A 0.042±0.00 0.015±0.00 0.042±0.00 N/A N/A N/A 0.005±0.00 0.030±0.00 0.017±0.00 0.681±0.34 0.290±0.27 0.072±0.00
ENSMUSG00000067750 ENSMUST00000088407 0.290±0.01 N/A 0.075±0.02 0.004±0.00 0.088±0.07 0.088±0.04 0.019±0.00 0.086±0.00 0.010±0.01 0.065±0.02 N/A 0.610±0.34 0.753±0.99 0.304±0.19
ENSMUSG00000086194 ENSMUST00000148174 0.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A N/A
ENSMUSG00000094436 ENSMUST00000137146 N/A N/A N/A 0.875±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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