C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112706-ENSG00000135312 CGP 9606 6:75921115-77463464
GeneTranscriptPositionBiotype
ENSG00000135312 (HTR1B)
5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled 		ENST00000369947 (HTR1B-001) 77462205-77463464 protein_coding
ENSG00000231762 (RP11-354K4.1)
 ENST00000440811 (RP11-354K4.1-001) 76660486-76662770 processed_pseudogene
ENSG00000236635 (RP11-35J1.1)
 ENST00000455554 (RP11-35J1.1-001) 76522451-76593623 lincRNA
ENSG00000271945 (RP11-354K4.2)
 ENST00000607287 (RP11-354K4.2-001) 76774983-76775860 lincRNA
CIL_0006PU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032343-ENSMUSG00000049511 CGP 10090 9:80313330-81633828
GeneTranscriptPositionBiotype
ENSMUSG00000032343 (Impg1)
interphotoreceptor matrix proteoglycan 1 		ENSMUST00000085289 (Impg1-201) 80313330-80465438 protein_coding
ENSMUST00000113250 (Impg1-001) 80313995-80465481 protein_coding
ENSMUST00000185068 (Impg1-002) 80383535-80465438 protein_coding
ENSMUSG00000049511 (Htr1b)
5-hydroxytryptamine (serotonin) receptor 1B 		ENSMUST00000051005 (Htr1b-201) 81631343-81632615 protein_coding
ENSMUST00000183482 (Htr1b-002) 81628291-81633828 protein_coding
ENSMUSG00000097466 (D430036J16Rik)
RIKEN cDNA D430036J16 gene 		ENSMUST00000180663 (D430036J16Rik-002) 81632358-81645085 antisense
ENSMUST00000181447 (D430036J16Rik-003) 81631930-81645156 antisense
ENSMUST00000181893 (D430036J16Rik-001) 81631551-81644629 antisense
ENSMUST00000183536 (D430036J16Rik-005) 81632033-81644195 antisense
ENSMUST00000183781 (D430036J16Rik-004) 81632418-81644352 antisense
ENSMUSG00000098429 (Gm27226)
predicted gene 27226 		ENSMUST00000184676 (Gm27226-002) 81455397-81460966 lincRNA
ENSMUSG00000098685 (Gm27224)
predicted gene 27224 		ENSMUST00000184749 (Gm27224-001) 80802651-80864861 lincRNA
ENSMUSG00000099085 (Gm8151)
predicted gene 8151 		ENSMUST00000184817 (Gm8151-001) 81016088-81016958 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PU_0001ENSG00000135312ENST00000369947ENSG00000231762ENST00000440811ENSG00000236635ENST00000455554ENSG00000271945ENST00000607287CIL_0006PU_0002ENSMUSG00000032343ENSMUST00000085289ENSMUST00000113250ENSMUST00000185068ENSMUSG00000049511ENSMUST00000051005ENSMUST00000183482ENSMUSG00000097466ENSMUST00000180663ENSMUST00000181447ENSMUST00000181893ENSMUST00000183536ENSMUST00000183781ENSMUSG00000098429ENSMUST00000184676ENSMUSG00000098685ENSMUST00000184749ENSMUSG00000099085ENSMUST00000184817
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PU_0001ENSG00000135312ENST00000369947ENSG00000231762ENST00000440811ENSG00000236635ENST00000455554ENSG00000271945ENST00000607287CIL_0006PU_0002ENSMUSG00000032343ENSMUST00000085289ENSMUST00000113250ENSMUSG00000049511ENSMUST00000051005ENSMUST00000183482ENSMUSG00000097466ENSMUST00000180663ENSMUST00000181447ENSMUST00000181893ENSMUST00000183536ENSMUST00000183781ENSMUSG00000098429ENSMUST00000184676ENSMUSG00000098685ENSMUST00000184749ENSMUSG00000099085ENSMUST00000184817
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135312 ENST00000369947 0.112±0.00 N/A 0.265±0.00 0.531±0.12 0.701±0.43 0.391±0.06 N/A 0.434±0.00 N/A 0.186±0.08 0.199±0.00 0.221±0.15 1.515±0.56 0.626±0.19
ENSG00000231762 ENST00000440811 0.074±0.00 0.150±0.00 N/A 0.083±0.00 0.030±0.00 0.050±0.04 0.013±0.00 0.062±0.00 0.040±0.03 0.015±0.00 N/A 0.015±0.00 0.010±0.00 0.044±0.03
ENSG00000236635 ENST00000455554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.13
ENSG00000271945 ENST00000607287 N/A N/A 0.196±0.00 N/A N/A N/A 0.080±0.00 0.035±0.00 N/A N/A N/A 0.317±0.29 N/A 0.235±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032343 ENSMUST00000085289 0.013±0.00 N/A N/A 0.078±0.00 0.027±0.01 0.025±0.00 N/A 0.009±0.00 0.014±0.01 N/A N/A 0.072±0.04 N/A 0.085±0.07
ENSMUST00000113250 0.020±0.00 N/A 0.006±0.00 0.046±0.00 0.021±0.00 N/A N/A N/A 0.004±0.00 0.027±0.01 N/A 0.057±0.01 0.019±0.01 0.070±0.03
ENSMUST00000185068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049511 ENSMUST00000051005 N/A 0.149±0.02 N/A N/A 0.036±0.02 0.038±0.00 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183482 0.120±0.11 0.156±0.02 0.232±0.03 0.444±0.16 0.036±0.01 0.083±0.05 0.037±0.00 0.146±0.01 0.007±0.00 0.205±0.02 0.016±0.00 0.237±0.16 0.058±0.02 0.094±0.09
ENSMUSG00000097466 ENSMUST00000180663 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A 0.650±0.00 N/A N/A
ENSMUST00000181447 N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A 0.104±0.03 N/A N/A 0.271±0.10 N/A N/A
ENSMUST00000181893 0.562±0.11 0.333±0.20 0.182±0.00 0.970±0.49 0.117±0.03 0.185±0.08 0.151±0.10 1.013±0.25 0.010±0.00 0.416±0.26 0.036±0.00 0.944±0.46 0.052±0.02 0.025±0.00
ENSMUST00000183536 0.500±0.00 N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A 0.066±0.00 0.711±0.24 N/A N/A
ENSMUST00000183781 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.824±0.00 N/A 1.140±0.30 N/A N/A
ENSMUSG00000098429 ENSMUST00000184676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 0.508±0.21
ENSMUSG00000098685 ENSMUST00000184749 0.421±0.24 N/A 0.019±0.00 0.059±0.04 0.179±0.00 0.320±0.13 0.176±0.07 0.154±0.06 0.081±0.07 0.398±0.05 N/A 0.513±0.28 1.777±1.83 1.901±1.05
ENSMUSG00000099085 ENSMUST00000184817 N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A

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