C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040301-ENSDARG00000091788 CGP 7955 12:49440483-49475020
GeneTranscriptPositionBiotype
ENSDARG00000040301 (lrrc20)
leucine rich repeat containing 20 		ENSDART00000058971 (lrrc20-201) 49440483-49463702 protein_coding
ENSDARG00000091788 (NPFFR1)
neuropeptide FF receptor 1 		ENSDART00000122364 (NPFFR1-201) 49465176-49475020 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006PZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037151-ENSMUSG00000020090 CGP 10090 10:61475833-61626385
GeneTranscriptPositionBiotype
ENSMUSG00000020090 (Npffr1)
neuropeptide FF receptor 1 		ENSMUST00000020287 (Npffr1-001) 61595492-61626385 protein_coding
ENSMUSG00000037151 (Lrrc20)
leucine rich repeat containing 20 		ENSMUST00000049242 (Lrrc20-201) 61475833-61582226 protein_coding
ENSMUSG00000043126 (D830039M14Rik)
RIKEN cDNA D830039M14 gene 		ENSMUST00000051330 (D830039M14Rik-201) 61475245-61476937 protein_coding
ENSMUSG00000101792 (RP24-323H7.3)
predicted gene 28447 		ENSMUST00000186283 (RP24-323H7.3-002) 61591241-61592217 retained_intron
ENSMUST00000186677 (RP24-323H7.3-001) 61585393-61611074 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PZ_0001ENSDARG00000040301ENSDART00000058971ENSDARG00000091788ENSDART00000122364CIL_0006PZ_0002ENSMUSG00000020090ENSMUST00000020287ENSMUSG00000037151ENSMUST00000049242ENSMUSG00000043126ENSMUST00000051330ENSMUSG00000101792ENSMUST00000186283ENSMUST00000186677
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PZ_0001ENSDARG00000040301ENSDART00000058971ENSDARG00000091788ENSDART00000122364CIL_0006PZ_0002ENSMUSG00000020090ENSMUST00000020287ENSMUSG00000037151ENSMUST00000049242ENSMUSG00000043126ENSMUST00000051330ENSMUSG00000101792ENSMUST00000186283ENSMUST00000186677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040301 ENSDART00000058971 N/A N/A N/A 4.076±3.05 N/A N/A 5.070±3.03 0.683±0.00 0.471±0.00 N/A 18.745±0.00 N/A N/A N/A
ENSDARG00000091788 ENSDART00000122364 N/A N/A N/A 2.137±0.33 N/A N/A 0.243±0.08 0.061±0.00 N/A N/A 0.116±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020090 ENSMUST00000020287 0.108±0.02 0.224±0.11 0.023±0.02 0.295±0.17 0.149±0.06 0.359±0.15 0.057±0.01 0.040±0.02 0.013±0.01 0.038±0.01 N/A 0.113±0.06 0.065±0.05 0.342±0.14
ENSMUSG00000037151 ENSMUST00000049242 2.143±0.79 5.935±2.97 5.180±0.67 5.473±1.45 6.324±3.55 3.478±1.79 6.759±1.40 1.365±0.61 3.243±1.70 2.970±0.46 69.578±19.41 4.176±0.84 4.697±2.95 1.041±0.42
ENSMUSG00000043126 ENSMUST00000051330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.475±0.06
ENSMUSG00000101792 ENSMUST00000186283 N/A N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 1.484±0.31
ENSMUST00000186677 0.016±0.00 0.044±0.02 N/A 0.160±0.03 0.064±0.01 0.103±0.00 0.019±0.01 0.013±0.00 0.009±0.01 0.055±0.03 N/A 0.079±0.06 0.031±0.03 0.540±0.25

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