C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128829-ENSG00000140319 CGP 9606 15:39934146-40039188
GeneTranscriptPositionBiotype
ENSG00000128829 (EIF2AK4)
eukaryotic translation initiation factor 2 alpha kinase 4 		ENST00000263791 (EIF2AK4-001) 39934153-40035590 protein_coding
ENST00000558557 (EIF2AK4-005) 40002391-40035591 retained_intron
ENST00000558629 (EIF2AK4-004) 39991166-40035591 retained_intron
ENST00000558743 (EIF2AK4-007) 40020526-40022597 retained_intron
ENST00000558823 (EIF2AK4-009) 40030393-40035481 protein_coding
ENST00000559032 (EIF2AK4-008) 40021543-40026002 retained_intron
ENST00000559311 (EIF2AK4-006) 40002391-40008193 processed_transcript
ENST00000559624 (EIF2AK4-002) 39934146-39975429 protein_coding
ENST00000560648 (EIF2AK4-010) 39934176-39946895 protein_coding
ENST00000560855 (EIF2AK4-003) 39953975-40035591 protein_coding
ENST00000624709 (EIF2AK4-011) 39976979-39978292 TEC
ENSG00000140319 (SRP14)
signal recognition particle 14kDa (homologous Alu RNA binding protein) 		ENST00000267884 (SRP14-001) 40035739-40039188 protein_coding
ENST00000558243 (SRP14-003) 40036986-40039162 retained_intron
ENST00000558527 (SRP14-002) 40036041-40039164 processed_transcript
ENST00000558720 (SRP14-005) 40036042-40039050 protein_coding
ENST00000559081 (SRP14-007) 40036688-40039153 protein_coding
ENST00000559439 (SRP14-006) 40036254-40038873 processed_transcript
ENST00000559475 (SRP14-008) 40036304-40038948 processed_transcript
ENST00000560773 (SRP14-004) 40036243-40039156 protein_coding
ENSG00000259389 (H3F3AP1)
H3 histone, family 3A pseudogene 1 		ENST00000559984 (H3F3AP1-001) 39951375-39951708 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006QZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005102-ENSMUSG00000009549 CGP 10090 2:118388618-118479711
GeneTranscriptPositionBiotype
ENSMUSG00000005102 (Eif2ak4)
eukaryotic translation initiation factor 2 alpha kinase 4 		ENSMUST00000005233 (Eif2ak4-001) 118388618-118475234 protein_coding
ENSMUST00000102527 (Eif2ak4-201) 118389112-118475231 protein_coding
ENSMUST00000110869 (Eif2ak4-006) 118438842-118452290 protein_coding
ENSMUST00000110870 (Eif2ak4-004) 118412346-118475234 protein_coding
ENSMUST00000110872 (Eif2ak4-003) 118389112-118475232 protein_coding
ENSMUST00000110874 (Eif2ak4-002) 118388847-118475234 protein_coding
ENSMUST00000110877 (Eif2ak4-005) 118388618-118428213 protein_coding
ENSMUST00000125281 (Eif2ak4-007) 118457160-118462094 processed_transcript
ENSMUSG00000009549 (Srp14)
signal recognition particle 14 		ENSMUST00000009693 (Srp14-001) 118475850-118479711 protein_coding
ENSMUST00000110862 (Srp14-003) 118478565-118479635 protein_coding
ENSMUST00000138189 (Srp14-002) 118475861-118479648 processed_transcript
ENSMUST00000149615 (Srp14-004) 118475851-118478883 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QZ_0001ENSG00000128829ENST00000263791ENST00000558557ENST00000558629ENST00000558743ENST00000558823ENST00000559032ENST00000559311ENST00000559624ENST00000560648ENST00000560855ENST00000624709ENSG00000140319ENST00000267884ENST00000558243ENST00000558527ENST00000558720ENST00000559081ENST00000559439ENST00000559475ENST00000560773ENSG00000259389ENST00000559984CIL_0006QZ_0002ENSMUSG00000005102ENSMUST00000005233ENSMUST00000102527ENSMUST00000110869ENSMUST00000110870ENSMUST00000110872ENSMUST00000110874ENSMUST00000110877ENSMUST00000125281ENSMUSG00000009549ENSMUST00000009693ENSMUST00000110862ENSMUST00000138189ENSMUST00000149615
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QZ_0001ENSG00000128829ENST00000263791ENST00000558557ENST00000558823ENST00000559624ENST00000560855ENSG00000140319ENST00000267884ENST00000558527ENST00000558720ENST00000560773ENSG00000259389ENST00000559984CIL_0006QZ_0002ENSMUSG00000005102ENSMUST00000005233ENSMUST00000102527ENSMUST00000110870ENSMUST00000110872ENSMUST00000110874ENSMUST00000125281ENSMUSG00000009549ENSMUST00000009693ENSMUST00000138189ENSMUST00000149615
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128829 ENST00000263791 5.496±0.00 2.349±0.00 1.760±0.00 2.991±0.30 3.142±0.42 3.486±0.87 3.182±1.26 2.469±0.06 2.912±0.25 2.791±0.50 2.549±0.00 6.368±2.82 7.085±2.72 3.091±0.49
ENST00000558557 N/A N/A N/A N/A N/A N/A N/A 1.615±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558823 N/A 9.271±0.00 N/A N/A N/A N/A N/A 5.317±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559624 N/A N/A N/A N/A 1.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560855 3.466±0.00 4.005±0.00 N/A 2.096±0.00 5.315±0.00 1.536±0.00 N/A 2.622±0.00 1.671±0.00 0.707±0.00 0.389±0.00 1.100±0.00 2.094±0.12 2.920±0.00
ENST00000624709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140319 ENST00000267884 22.083±0.00 31.597±0.00 9.535±0.00 40.588±9.22 17.183±0.77 20.316±8.45 9.418±0.73 22.867±0.62 15.451±2.39 16.503±3.05 15.548±7.41 43.545±23.14 56.464±18.17 32.926±19.03
ENST00000558243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558527 57.251±0.00 63.208±0.00 N/A 74.046±0.00 75.492±0.00 79.396±0.00 42.969±0.00 88.360±0.00 35.477±0.00 77.846±0.00 27.821±0.00 25.846±22.57 35.561±4.04 75.146±0.00
ENST00000558720 29.560±0.00 37.139±0.00 N/A 42.446±0.00 33.973±0.00 19.736±0.00 18.493±0.00 N/A 32.115±0.00 54.485±0.00 30.616±0.00 219.236±186.75 210.299±217.13 239.839±168.22
ENST00000559081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560773 28.548±0.00 38.888±0.00 N/A 44.197±0.00 41.349±0.00 70.167±0.00 N/A N/A N/A N/A N/A N/A 134.552±0.00 48.111±0.00
ENSG00000259389 ENST00000559984 0.043±0.00 N/A N/A N/A 1.287±0.00 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A 0.118±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005102 ENSMUST00000005233 3.519±0.68 5.479±1.51 2.918±0.05 3.498±0.71 2.355±0.56 4.329±0.86 0.871±0.45 2.850±0.86 3.455±1.90 3.658±1.73 0.624±0.21 6.704±3.35 3.919±0.78 1.131±0.36
ENSMUST00000102527 1.085±0.00 N/A N/A 1.806±0.00 1.236±0.00 N/A 0.223±0.00 N/A 0.547±0.08 N/A 0.304±0.08 2.349±0.06 1.651±0.37 0.131±0.00
ENSMUST00000110869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110870 N/A N/A N/A 1.334±0.10 N/A 0.800±0.00 0.278±0.00 N/A N/A N/A N/A N/A N/A 0.329±0.09
ENSMUST00000110872 1.030±0.00 N/A N/A 0.996±0.00 1.054±0.00 N/A 0.218±0.00 N/A 0.535±0.08 N/A 0.294±0.07 2.307±0.06 1.611±0.36 0.120±0.00
ENSMUST00000110874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A
ENSMUST00000110877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125281 N/A N/A N/A 15.669±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 11.450±4.72 3.279±0.00
ENSMUSG00000009549 ENSMUST00000009693 36.722±5.82 51.362±3.64 100.600±14.52 110.053±44.28 33.126±3.58 22.622±2.28 33.748±5.72 37.904±7.15 41.301±17.92 43.241±2.07 73.964±3.08 50.122±44.65 95.557±27.68 126.144±60.12
ENSMUST00000110862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138189 N/A N/A N/A N/A 22.792±0.00 N/A N/A N/A N/A N/A N/A 33.907±0.00 77.239±0.00 132.038±0.00
ENSMUST00000149615 N/A N/A N/A 97.214±0.00 39.211±0.00 N/A 10.395±0.75 N/A N/A N/A N/A 42.904±29.63 62.374±0.16 N/A

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