C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006R1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151233-ENSG00000015153 CGP 9606 12:42081845-42238349
GeneTranscriptPositionBiotype
ENSG00000015153 (YAF2)
YY1 associated factor 2 		ENST00000327791 (YAF2-004) 42157104-42238236 protein_coding
ENST00000380790 (YAF2-002) 42159902-42238287 protein_coding
ENST00000534854 (YAF2-001) 42159124-42238248 protein_coding
ENST00000541702 (YAF2-008) 42231224-42238248 processed_transcript
ENST00000546726 (YAF2-015) 42161671-42238180 nonsense_mediated_decay
ENST00000546782 (YAF2-009) 42235642-42237783 retained_intron
ENST00000546972 (YAF2-014) 42161671-42199544 retained_intron
ENST00000547254 (YAF2-005) 42161749-42238349 nonsense_mediated_decay
ENST00000547351 (YAF2-016) 42160608-42238221 nonsense_mediated_decay
ENST00000547622 (YAF2-017) 42160496-42237512 processed_transcript
ENST00000547724 (YAF2-011) 42161672-42237800 processed_transcript
ENST00000548661 (YAF2-006) 42161653-42238303 nonsense_mediated_decay
ENST00000548917 (YAF2-010) 42161699-42237800 protein_coding
ENST00000550315 (YAF2-018) 42160042-42161628 retained_intron
ENST00000551268 (YAF2-007) 42161613-42238263 nonsense_mediated_decay
ENST00000551528 (YAF2-013) 42161628-42210836 retained_intron
ENST00000552109 (YAF2-003) 42160266-42238248 nonsense_mediated_decay
ENST00000552928 (YAF2-012) 42161690-42238223 nonsense_mediated_decay
ENST00000555248 (YAF2-201) 42231224-42238349 protein_coding
ENSG00000151233 (GXYLT1)
glucoside xylosyltransferase 1 		ENST00000280876 (GXYLT1-002) 42087145-42144712 protein_coding
ENST00000398675 (GXYLT1-001) 42081845-42144879 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0006R1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036197-ENSMUSG00000022634 CGP 10090 15:93239742-93336935
GeneTranscriptPositionBiotype
ENSMUSG00000022634 (Yaf2)
YY1 associated factor 2 		ENSMUST00000080299 (Yaf2-001) 93284278-93336808 protein_coding
ENSMUST00000133736 (Yaf2-002) 93284281-93336935 processed_transcript
ENSMUSG00000036197 (Gxylt1)
glucoside xylosyltransferase 1 		ENSMUST00000049484 (Gxylt1-001) 93239742-93275161 protein_coding
ENSMUST00000057896 (Gxylt1-002) 93244455-93275151 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006R1_0001ENSG00000015153ENST00000327791ENST00000380790ENST00000534854ENST00000541702ENST00000546726ENST00000546782ENST00000546972ENST00000547254ENST00000547351ENST00000547622ENST00000547724ENST00000548661ENST00000548917ENST00000550315ENST00000551268ENST00000551528ENST00000552109ENST00000552928ENST00000555248ENSG00000151233ENST00000280876ENST00000398675CIL_0006R1_0002ENSMUSG00000022634ENSMUST00000080299ENSMUST00000133736ENSMUSG00000036197ENSMUST00000049484ENSMUST00000057896
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006R1_0001ENSG00000015153ENST00000327791ENST00000380790ENST00000534854ENST00000541702ENST00000547622ENST00000550315ENST00000552109ENST00000552928ENSG00000151233ENST00000280876ENST00000398675CIL_0006R1_0002ENSMUSG00000022634ENSMUST00000080299ENSMUST00000133736ENSMUSG00000036197ENSMUST00000049484ENSMUST00000057896
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000015153 ENST00000327791 N/A 0.691±0.00 N/A 1.556±0.07 0.832±0.00 0.805±0.04 0.523±0.00 1.150±0.00 0.286±0.04 0.986±0.00 N/A 0.866±0.22 0.713±0.00 0.889±0.03
ENST00000380790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.696±0.00 N/A
ENST00000534854 2.693±0.00 2.362±0.00 0.815±0.00 2.868±0.03 2.161±0.35 1.209±0.00 5.391±3.54 2.237±1.35 1.941±0.23 1.650±0.78 2.341±0.00 1.476±0.51 1.637±0.26 2.845±0.38
ENST00000541702 N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A 0.465±0.00 N/A N/A N/A N/A N/A
ENST00000546726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547622 N/A 5.625±0.00 1.188±0.00 4.899±2.28 N/A 4.755±0.00 8.757±5.30 N/A 2.395±0.10 7.016±0.00 N/A 7.940±0.00 7.409±0.00 7.802±0.00
ENST00000547724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550315 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.477±0.00 N/A N/A N/A N/A
ENST00000551268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552109 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.480±0.00 N/A N/A N/A N/A
ENST00000552928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.819±0.00 N/A N/A N/A
ENST00000555248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151233 ENST00000280876 N/A N/A 0.830±0.00 0.340±0.00 N/A N/A N/A 1.071±0.00 0.847±0.00 1.100±0.00 0.462±0.00 1.698±0.00 N/A 2.617±0.00
ENST00000398675 0.420±0.00 N/A N/A 0.258±0.00 0.392±0.20 0.376±0.24 0.564±0.23 1.171±0.00 0.523±0.00 1.432±0.00 0.174±0.00 0.646±0.30 1.042±0.46 2.668±0.99
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022634 ENSMUST00000080299 14.940±1.69 19.857±1.23 11.972±0.26 14.572±6.08 11.881±2.99 9.157±1.26 9.208±1.08 9.287±1.36 8.711±1.29 13.099±1.07 3.286±0.87 18.215±7.68 9.714±5.07 3.331±1.24
ENSMUST00000133736 10.665±0.86 20.386±6.63 10.029±1.85 9.736±2.67 7.979±3.82 6.345±1.00 3.896±0.76 6.571±0.50 4.574±0.89 10.814±1.30 5.622±0.51 11.875±6.02 4.198±2.65 1.410±0.54
ENSMUSG00000036197 ENSMUST00000049484 1.156±0.53 2.507±0.78 0.500±0.00 0.390±0.00 2.174±0.13 2.145±0.00 0.563±0.00 0.936±0.52 0.634±0.15 1.493±0.00 0.205±0.05 2.153±0.41 3.783±3.25 N/A
ENSMUST00000057896 N/A 1.810±0.00 N/A N/A 4.155±0.80 N/A N/A N/A N/A 3.503±0.00 N/A 4.064±1.36 11.902±0.00 9.316±2.04

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