C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006R8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151239-ENSG00000139173 CGP 9606 12:43793723-44389762
GeneTranscriptPositionBiotype
ENSG00000139173 (TMEM117)
transmembrane protein 117 		ENST00000266534 (TMEM117-001) 43836098-44389758 protein_coding
ENST00000546387 (TMEM117-005) 43835967-43844984 retained_intron
ENST00000546868 (TMEM117-002) 43836153-44389762 nonsense_mediated_decay
ENST00000546978 (TMEM117-003) 44318295-44389760 processed_transcript
ENST00000550495 (TMEM117-006) 43844851-44388035 protein_coding
ENST00000550623 (TMEM117-007) 44073651-44376656 processed_transcript
ENST00000551577 (TMEM117-004) 43836083-44389758 protein_coding
ENST00000553253 (TMEM117-008) 44073512-44376724 processed_transcript
ENSG00000151239 (TWF1)
twinfilin actin-binding protein 1 		ENST00000395510 (TWF1-001) 43793723-43806375 protein_coding
ENST00000546506 (TWF1-006) 43800474-43806316 protein_coding
ENST00000546662 (TWF1-007) 43797302-43806296 protein_coding
ENST00000547459 (TWF1-004) 43793725-43806262 nonsense_mediated_decay
ENST00000547564 (TWF1-010) 43802284-43806282 processed_transcript
ENST00000547961 (TWF1-011) 43804153-43806255 retained_intron
ENST00000548315 (TWF1-005) 43795493-43806249 protein_coding
ENST00000548403 (TWF1-012) 43799462-43806300 protein_coding
ENST00000550371 (TWF1-008) 43799417-43806328 nonsense_mediated_decay
ENST00000551789 (TWF1-009) 43795556-43797851 retained_intron
ENST00000552521 (TWF1-003) 43793723-43806287 protein_coding
ENSG00000257864 (RP11-46I1.2)
 ENST00000548007 (RP11-46I1.2-001) 44248432-44249004 processed_pseudogene
ENSG00000257947 (RP11-46I1.1)
 ENST00000552558 (RP11-46I1.1-001) 44244394-44263982 antisense
ENSG00000258212 (RP11-624G19.1)
 ENST00000546499 (RP11-624G19.1-001) 44008620-44010143 processed_pseudogene
CIL_0006R8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022451-ENSMUSG00000063296 CGP 10090 15:94577951-95096097
GeneTranscriptPositionBiotype
ENSMUSG00000022451 (Twf1)
twinfilin, actin-binding protein, homolog 1 (Drosophila) 		ENSMUST00000023087 (Twf1-001) 94577951-94589879 protein_coding
ENSMUST00000127347 (Twf1-004) 94581020-94581386 retained_intron
ENSMUST00000152590 (Twf1-002) 94584443-94589889 protein_coding
ENSMUST00000155654 (Twf1-003) 94579666-94585475 processed_transcript
ENSMUSG00000059883 (Irak4)
interleukin-1 receptor-associated kinase 4 		ENSMUST00000074936 (Irak4-001) 94543643-94568306 protein_coding
ENSMUST00000109248 (Irak4-002) 94543672-94581815 protein_coding
ENSMUST00000138306 (Irak4-003) 94543653-94556953 retained_intron
ENSMUSG00000063296 (Tmem117)
transmembrane protein 117 		ENSMUST00000080141 (Tmem117-201) 94629185-95096097 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006R8_0001ENSG00000139173ENST00000266534ENST00000546387ENST00000546868ENST00000546978ENST00000550495ENST00000550623ENST00000551577ENST00000553253ENSG00000151239ENST00000395510ENST00000546506ENST00000546662ENST00000547459ENST00000547564ENST00000547961ENST00000548315ENST00000548403ENST00000550371ENST00000551789ENST00000552521ENSG00000257864ENST00000548007ENSG00000257947ENST00000552558ENSG00000258212ENST00000546499CIL_0006R8_0002ENSMUSG00000022451ENSMUST00000023087ENSMUST00000127347ENSMUST00000152590ENSMUST00000155654ENSMUSG00000059883ENSMUST00000074936ENSMUST00000109248ENSMUST00000138306ENSMUSG00000063296ENSMUST00000080141
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006R8_0001ENSG00000139173ENST00000266534ENST00000546387ENST00000546868ENST00000546978ENST00000550495ENST00000551577ENSG00000151239ENST00000395510ENST00000546662ENST00000547459ENST00000548315ENST00000551789ENST00000552521ENSG00000257864ENST00000548007ENSG00000257947ENST00000552558ENSG00000258212ENST00000546499CIL_0006R8_0002ENSMUSG00000022451ENSMUST00000023087ENSMUST00000155654ENSMUSG00000059883ENSMUST00000074936ENSMUST00000138306ENSMUSG00000063296ENSMUST00000080141
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139173 ENST00000266534 0.896±0.00 0.339±0.00 N/A 0.780±0.15 0.760±0.00 1.330±0.00 0.774±0.34 0.353±0.03 0.312±0.00 N/A N/A 1.298±0.42 1.288±0.10 1.506±0.00
ENST00000546387 N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A 0.312±0.00 0.966±0.00 N/A N/A N/A
ENST00000546868 N/A 0.557±0.00 N/A 0.656±0.45 N/A N/A N/A N/A N/A N/A N/A 0.357±0.09 N/A N/A
ENST00000546978 0.142±0.00 0.728±0.00 N/A 0.583±0.00 0.336±0.00 0.468±0.00 N/A 0.638±0.00 0.470±0.00 0.150±0.05 0.309±0.00 1.050±0.00 0.361±0.09 0.816±0.00
ENST00000550495 N/A N/A N/A N/A N/A N/A N/A N/A 3.576±0.00 N/A N/A N/A N/A N/A
ENST00000550623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551577 N/A 0.173±0.00 0.487±0.00 0.424±0.00 0.474±0.00 N/A 0.702±0.00 0.585±0.00 0.551±0.00 0.422±0.00 N/A 0.666±0.00 N/A 0.882±0.00
ENST00000553253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151239 ENST00000395510 10.227±0.00 13.315±0.00 N/A 5.787±1.05 9.737±4.37 14.302±1.91 1.395±0.71 22.017±0.00 4.531±0.82 3.909±1.12 N/A 12.964±1.25 7.371±1.50 10.200±6.29
ENST00000546506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.728±0.00 N/A N/A N/A
ENST00000547459 N/A N/A 1.107±0.00 0.914±0.00 N/A N/A N/A N/A N/A 2.208±0.00 N/A N/A N/A 1.020±0.00
ENST00000547564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548315 N/A N/A N/A 3.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551789 N/A N/A N/A N/A N/A N/A 1.353±0.00 N/A N/A N/A N/A 10.509±0.00 4.738±0.00 5.076±0.00
ENST00000552521 3.518±0.00 N/A 3.090±0.00 N/A 7.766±0.00 N/A N/A 3.269±0.00 4.410±0.00 2.084±0.00 0.764±0.00 3.438±0.00 0.945±0.00 N/A
ENSG00000257864 ENST00000548007 N/A N/A 0.112±0.00 N/A 0.619±0.00 0.247±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257947 ENST00000552558 0.065±0.00 0.388±0.00 N/A 0.250±0.00 0.531±0.36 0.233±0.00 0.339±0.00 0.295±0.00 0.064±0.00 0.300±0.00 N/A 1.894±0.00 N/A 0.343±0.00
ENSG00000258212 ENST00000546499 N/A N/A 0.026±0.00 0.017±0.00 0.684±0.00 0.095±0.00 0.090±0.00 0.231±0.00 0.046±0.00 0.345±0.00 0.244±0.00 0.061±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022451 ENSMUST00000023087 29.273±1.24 14.602±1.98 40.975±2.15 15.200±8.40 15.728±5.08 38.545±4.59 3.671±1.35 33.751±2.34 12.607±3.08 20.012±1.22 2.031±0.45 28.336±7.81 22.503±11.68 6.370±2.48
ENSMUST00000127347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155654 N/A N/A N/A 8.274±0.00 N/A N/A N/A N/A N/A N/A N/A 20.927±0.00 27.339±9.19 5.179±0.00
ENSMUSG00000059883 ENSMUST00000074936 4.722±0.29 4.751±1.14 6.970±0.64 N/A 4.842±0.63 8.280±1.75 1.325±0.17 4.758±0.31 3.124±0.66 4.538±0.77 0.480±0.08 5.609±0.68 9.169±1.34 2.115±0.75
ENSMUST00000109248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138306 N/A N/A N/A N/A N/A 12.255±1.34 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063296 ENSMUST00000080141 0.225±0.12 0.847±0.39 0.445±0.17 1.076±0.65 0.500±0.03 4.501±0.84 2.679±0.31 3.344±0.34 0.014±0.01 0.960±0.41 5.081±0.43 0.806±0.34 0.059±0.03 0.384±0.13

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