C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184613-ENSG00000185610 CGP 9606 12:44508275-45051099
GeneTranscriptPositionBiotype
ENSG00000184613 (NELL2)
NEL-like 2 (chicken) 		ENST00000333837 (NELL2-006) 44508603-44913928 protein_coding
ENST00000395487 (NELL2-201) 44508275-44875654 protein_coding
ENST00000429094 (NELL2-002) 44508278-44876374 protein_coding
ENST00000437801 (NELL2-001) 44508628-44877097 protein_coding
ENST00000452445 (NELL2-010) 44508282-44876355 protein_coding
ENST00000546415 (NELL2-020) 44874999-44876286 retained_intron
ENST00000547172 (NELL2-018) 44779688-44851847 processed_transcript
ENST00000547636 (NELL2-016) 44521962-44523635 retained_intron
ENST00000547751 (NELL2-008) 44665436-44876315 retained_intron
ENST00000548531 (NELL2-019) 44815986-44875812 protein_coding
ENST00000548826 (NELL2-017) 44815909-44876016 protein_coding
ENST00000549027 (NELL2-003) 44508535-44876315 protein_coding
ENST00000549668 (NELL2-014) 44532515-44703780 retained_intron
ENST00000550139 (NELL2-015) 44522777-44532621 protein_coding
ENST00000550313 (NELL2-013) 44610910-44777049 protein_coding
ENST00000550462 (NELL2-012) 44774609-44777122 protein_coding
ENST00000551601 (NELL2-005) 44508282-44876315 protein_coding
ENST00000551949 (NELL2-009) 44875342-44914139 protein_coding
ENST00000552993 (NELL2-007) 44774778-44921848 protein_coding
ENST00000553120 (NELL2-021) 44779849-44875468 protein_coding
ENSG00000185610 (DBX2)
developing brain homeobox 2 		ENST00000332700 (DBX2-001) 45014672-45051099 protein_coding
ENSG00000257319 (RP11-478B9.1)
 ENST00000548424 (RP11-478B9.1-001) 45050901-45103107 antisense
CIL_0006RA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022454-ENSMUSG00000045608 CGP 10090 15:95219451-95655960
GeneTranscriptPositionBiotype
ENSMUSG00000022454 (Nell2)
NEL-like 2 		ENSMUST00000075275 (Nell2-201) 95219933-95528252 protein_coding
ENSMUST00000166170 (Nell2-202) 95219451-95528706 protein_coding
ENSMUSG00000045608 (Dbx2)
developing brain homeobox 2 		ENSMUST00000054244 (Dbx2-001) 95623563-95655960 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RA_0001ENSG00000184613ENST00000333837ENST00000395487ENST00000429094ENST00000437801ENST00000452445ENST00000546415ENST00000547172ENST00000547636ENST00000547751ENST00000548531ENST00000548826ENST00000549027ENST00000549668ENST00000550139ENST00000550313ENST00000550462ENST00000551601ENST00000551949ENST00000552993ENST00000553120ENSG00000185610ENST00000332700ENSG00000257319ENST00000548424CIL_0006RA_0002ENSMUSG00000022454ENSMUST00000075275ENSMUST00000166170ENSMUSG00000045608ENSMUST00000054244
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RA_0001ENSG00000184613ENST00000333837ENST00000395487ENST00000429094ENST00000437801ENST00000452445ENST00000546415ENST00000547172ENST00000547636ENST00000547751ENST00000548826ENST00000549027ENST00000549668ENST00000550313ENST00000551601ENST00000552993ENST00000553120ENSG00000185610ENST00000332700ENSG00000257319ENST00000548424CIL_0006RA_0002ENSMUSG00000022454ENSMUST00000075275ENSMUST00000166170ENSMUSG00000045608ENSMUST00000054244
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184613 ENST00000333837 N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A N/A
ENST00000395487 N/A N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429094 N/A 1.016±0.00 N/A 24.489±5.63 0.082±0.00 0.354±0.00 N/A N/A N/A 2.550±0.00 N/A 1.271±1.09 N/A 0.327±0.00
ENST00000437801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.264±0.00
ENST00000452445 N/A 1.392±0.00 N/A 41.595±0.00 0.183±0.00 0.274±0.00 N/A 0.291±0.00 N/A 2.111±1.74 N/A 4.926±0.00 N/A 1.367±0.00
ENST00000546415 N/A N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547172 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547636 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A N/A 0.102±0.00 N/A
ENST00000547751 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.190±0.00 N/A N/A N/A 0.096±0.00 N/A N/A
ENST00000548531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548826 N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A N/A N/A 0.837±0.00 N/A N/A
ENST00000549027 N/A N/A 0.118±0.00 N/A 0.116±0.00 N/A 0.045±0.00 0.286±0.00 0.034±0.00 N/A N/A 0.454±0.00 0.141±0.00 0.389±0.00
ENST00000549668 N/A N/A N/A N/A 0.714±0.00 N/A 0.101±0.05 N/A N/A N/A N/A 12.272±0.00 N/A N/A
ENST00000550139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550313 0.128±0.00 N/A 0.232±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 0.105±0.00 N/A
ENST00000551949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552993 0.038±0.00 N/A N/A N/A N/A N/A N/A 0.359±0.00 N/A N/A N/A 0.152±0.00 N/A N/A
ENST00000553120 N/A N/A N/A N/A 0.321±0.00 N/A N/A N/A 0.084±0.00 4.025±0.00 N/A N/A 0.185±0.00 N/A
ENSG00000185610 ENST00000332700 0.044±0.00 0.103±0.00 N/A 0.320±0.15 0.403±0.00 0.019±0.01 0.009±0.00 0.055±0.00 N/A N/A N/A 0.013±0.00 0.014±0.00 0.706±0.23
ENSG00000257319 ENST00000548424 N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022454 ENSMUST00000075275 0.022±0.01 0.106±0.03 0.402±0.07 118.997±100.25 0.021±0.01 0.306±0.15 0.081±0.04 0.036±0.00 0.106±0.03 0.046±0.03 0.027±0.01 0.535±0.34 0.055±0.03 3.945±2.39
ENSMUST00000166170 0.035±0.01 0.321±0.13 0.402±0.00 46.076±18.82 N/A 0.409±0.07 0.060±0.00 0.084±0.04 0.162±0.05 0.095±0.01 0.024±0.00 0.284±0.16 0.059±0.03 2.245±1.60
ENSMUSG00000045608 ENSMUST00000054244 N/A 0.072±0.03 0.017±0.00 0.530±0.36 0.091±0.07 0.032±0.02 N/A 0.015±0.00 0.002±0.00 0.012±0.00 0.013±0.00 0.120±0.09 0.013±0.01 0.022±0.02

Loading