C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100393-ENSG00000100395 CGP 9606 22:41091786-41231271
GeneTranscriptPositionBiotype
ENSG00000100393 (EP300)
E1A binding protein p300 		ENST00000263253 (EP300-001) 41091786-41180077 protein_coding
ENSG00000100395 (L3MBTL2)
l(3)mbt-like 2 (Drosophila) 		ENST00000216237 (L3MBTL2-001) 41205205-41231271 protein_coding
ENST00000449635 (L3MBTL2-008) 41209696-41221367 protein_coding
ENST00000450939 (L3MBTL2-009) 41209696-41224165 nonsense_mediated_decay
ENST00000452106 (L3MBTL2-005) 41205324-41231271 nonsense_mediated_decay
ENST00000453659 (L3MBTL2-007) 41205312-41210008 nonsense_mediated_decay
ENST00000466589 (L3MBTL2-004) 41205309-41230654 retained_intron
ENST00000479978 (L3MBTL2-002) 41205321-41231270 retained_intron
ENST00000481902 (L3MBTL2-003) 41205282-41227810 retained_intron
ENST00000489136 (L3MBTL2-006) 41205302-41217173 processed_transcript
ENSG00000100399 (CHADL)
chondroadherin-like 		ENST00000216241 (CHADL-001) 41229513-41240934 protein_coding
ENST00000417999 (CHADL-002) 41229510-41239621 protein_coding
ENST00000455425 (CHADL-003) 41235140-41240894 protein_coding
ENSG00000215771 (LRRC37A14P)
leucine rich repeat containing 37, member A14, pseudogene 		ENST00000452297 (LRRC37A14P-001) 41189727-41190188 processed_pseudogene
ENSG00000231993 (EP300-AS1)
EP300 antisense RNA 1 		ENST00000420537 (EP300-AS1-001) 41174591-41197456 antisense
ENSG00000235513 (RP4-756G23.5)
 ENST00000441316 (RP4-756G23.5-001) 41209122-41217627 antisense
ENST00000451176 (RP4-756G23.5-002) 41209682-41217623 antisense
ENSG00000252859 (RNU6-375P)
RNA, U6 small nuclear 375, pseudogene 		ENST00000517050 (RNU6-375P-201) 41168217-41168316 snRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006RK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055024-ENSMUSG00000022394 CGP 10090 15:81585351-81688315
GeneTranscriptPositionBiotype
ENSMUSG00000022394 (L3mbtl2)
l(3)mbt-like 2 (Drosophila) 		ENSMUST00000023029 (L3mbtl2-001) 81663889-81688315 protein_coding
ENSMUST00000172568 (L3mbtl2-003) 81663956-81688299 processed_transcript
ENSMUST00000172620 (L3mbtl2-004) 81663954-81688305 retained_intron
ENSMUST00000172748 (L3mbtl2-005) 81663956-81688315 protein_coding
ENSMUST00000173105 (L3mbtl2-010) 81668678-81670369 retained_intron
ENSMUST00000173607 (L3mbtl2-009) 81668747-81675633 processed_transcript
ENSMUST00000173761 (L3mbtl2-006) 81686022-81687187 retained_intron
ENSMUST00000174229 (L3mbtl2-002) 81663934-81688305 protein_coding
ENSMUST00000174274 (L3mbtl2-011) 81664001-81682065 processed_transcript
ENSMUST00000174401 (L3mbtl2-007) 81682009-81683850 retained_intron
ENSMUST00000174497 (L3mbtl2-008) 81675522-81677294 protein_coding
ENSMUSG00000055024 (Ep300)
E1A binding protein p300 		ENSMUST00000068387 (Ep300-001) 81586220-81652072 protein_coding
ENSMUST00000185375 (Ep300-004) 81585351-81588344 retained_intron
ENSMUST00000185967 (Ep300-006) 81613315-81623518 protein_coding
ENSMUST00000187776 (Ep300-003) 81636148-81644605 retained_intron
ENSMUST00000189338 (Ep300-002) 81586220-81624218 retained_intron
ENSMUST00000190035 (Ep300-005) 81613333-81616542 retained_intron
ENSMUSG00000063765 (Chadl)
chondroadherin-like 		ENSMUST00000072910 (Chadl-001) 81686165-81697287 protein_coding
ENSMUST00000173598 (Chadl-003) 81678296-81694028 nonsense_mediated_decay
ENSMUST00000173898 (Chadl-002) 81686181-81694207 nonsense_mediated_decay
ENSMUSG00000092325 (Gm18284)
predicted gene, 18284 		ENSMUST00000172604 (Gm18284-001) 81674255-81674878 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RK_0001ENSG00000100393ENST00000263253ENSG00000100395ENST00000216237ENST00000449635ENST00000450939ENST00000452106ENST00000453659ENST00000466589ENST00000479978ENST00000481902ENST00000489136ENSG00000100399ENST00000216241ENST00000417999ENST00000455425ENSG00000215771ENST00000452297ENSG00000231993ENST00000420537ENSG00000235513ENST00000441316ENST00000451176ENSG00000252859ENST00000517050CIL_0006RK_0002ENSMUSG00000022394ENSMUST00000023029ENSMUST00000172568ENSMUST00000172620ENSMUST00000172748ENSMUST00000173105ENSMUST00000173607ENSMUST00000173761ENSMUST00000174229ENSMUST00000174274ENSMUST00000174401ENSMUST00000174497ENSMUSG00000055024ENSMUST00000068387ENSMUST00000185375ENSMUST00000185967ENSMUST00000187776ENSMUST00000189338ENSMUST00000190035ENSMUSG00000063765ENSMUST00000072910ENSMUST00000173598ENSMUST00000173898ENSMUSG00000092325ENSMUST00000172604
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RK_0001ENSG00000100393ENST00000263253ENSG00000100395ENST00000216237ENST00000449635ENST00000452106ENST00000466589ENST00000479978ENST00000481902ENSG00000100399ENST00000216241ENST00000417999ENSG00000215771ENST00000452297ENSG00000231993ENST00000420537ENSG00000235513ENST00000441316ENST00000451176ENSG00000252859ENST00000517050CIL_0006RK_0002ENSMUSG00000022394ENSMUST00000023029ENSMUST00000172620ENSMUST00000172748ENSMUST00000174229ENSMUSG00000055024ENSMUST00000068387ENSMUST00000185375ENSMUSG00000063765ENSMUST00000072910ENSMUST00000173598ENSMUST00000173898ENSMUSG00000092325ENSMUST00000172604
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100393 ENST00000263253 7.959±0.00 4.602±0.00 3.149±0.00 4.372±1.35 4.977±1.13 3.763±2.22 6.474±0.00 5.198±2.46 4.598±1.40 6.270±0.51 4.132±3.30 5.737±3.52 8.272±2.40 12.332±0.12
ENSG00000100395 ENST00000216237 2.471±0.00 7.348±0.00 0.249±0.00 4.857±1.04 4.178±2.66 5.101±0.00 1.274±0.47 2.630±0.00 2.104±1.10 3.986±0.00 1.192±0.00 8.760±5.37 9.534±3.00 5.853±0.39
ENST00000449635 N/A N/A N/A N/A N/A 1.850±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452106 N/A 2.926±0.00 N/A N/A N/A N/A 1.742±0.00 4.210±0.00 1.939±0.00 N/A 1.761±0.00 N/A N/A 3.475±0.00
ENST00000453659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466589 N/A N/A 0.502±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479978 0.427±0.00 N/A N/A N/A 0.733±0.00 N/A 0.173±0.00 N/A N/A N/A N/A 0.737±0.00 N/A N/A
ENST00000481902 N/A N/A N/A N/A N/A 1.541±0.00 N/A N/A 1.193±0.00 N/A N/A N/A N/A N/A
ENST00000489136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100399 ENST00000216241 N/A N/A N/A 12.517±0.00 N/A 6.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417999 N/A N/A N/A N/A N/A N/A 4.318±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000455425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215771 ENST00000452297 N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A 0.082±0.00 0.344±0.00 N/A 0.075±0.00 0.076±0.00 0.653±0.46
ENSG00000231993 ENST00000420537 N/A 0.478±0.00 N/A 0.358±0.00 0.407±0.30 0.264±0.16 0.185±0.12 0.400±0.00 N/A 0.716±0.22 0.108±0.01 0.316±0.10 0.190±0.03 1.373±0.00
ENSG00000235513 ENST00000441316 N/A 1.824±0.00 N/A N/A 1.879±0.00 N/A 0.298±0.00 N/A N/A N/A N/A 3.147±0.00 N/A N/A
ENST00000451176 N/A N/A N/A N/A N/A N/A N/A N/A 4.074±0.00 N/A N/A 4.289±0.00 N/A N/A
ENSG00000252859 ENST00000517050 N/A 0.174±0.00 N/A 0.325±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022394 ENSMUST00000023029 4.950±0.63 4.098±0.70 8.446±0.70 6.924±1.02 4.800±0.71 3.459±0.41 2.419±0.20 3.904±0.23 5.363±2.83 4.013±0.46 3.138±0.40 4.837±1.49 9.910±4.66 8.697±2.86
ENSMUST00000172568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.465±0.00 N/A 0.278±0.00
ENSMUST00000172748 N/A N/A N/A 4.956±0.00 2.774±0.00 N/A N/A N/A N/A N/A 0.647±0.00 3.010±0.00 3.023±1.32 1.844±0.00
ENSMUST00000173105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.923±0.00 N/A N/A N/A
ENSMUST00000174274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000055024 ENSMUST00000068387 3.065±1.57 3.714±1.65 5.451±4.46 7.218±2.18 3.827±1.83 8.578±5.29 3.775±1.43 4.153±2.30 2.843±1.98 7.388±1.70 5.188±0.68 7.396±4.51 8.290±4.49 5.258±0.84
ENSMUST00000185375 N/A 9.505±1.00 N/A N/A N/A 5.956±0.00 N/A N/A N/A N/A N/A 4.691±0.00 N/A N/A
ENSMUST00000185967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063765 ENSMUST00000072910 1.721±0.00 1.407±0.39 N/A 3.968±0.06 2.710±0.60 1.329±0.13 N/A 2.977±0.00 0.377±0.00 1.094±0.00 N/A 1.809±0.42 N/A N/A
ENSMUST00000173598 N/A N/A N/A N/A 1.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173898 N/A 7.777±1.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092325 ENSMUST00000172604 0.191±0.11 0.349±0.14 0.425±0.05 0.331±0.19 0.366±0.20 0.417±0.11 0.337±0.20 0.413±0.21 0.264±0.22 0.392±0.20 0.192±0.13 0.566±0.34 0.316±0.17 0.374±0.08

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