C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063419-ENSDARG00000017121 CGP 7955 23:2927690-3423555
GeneTranscriptPositionBiotype
ENSDARG00000017121 (mafba)
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) 		ENSDART00000002309 (mafba-201) 3420382-3423555 protein_coding
ENSDARG00000063419 (DHX35)
DEAH (Asp-Glu-Ala-His) box polypeptide 35 		ENSDART00000092679 (DHX35-201) 2927690-2944744 protein_coding
ENSDART00000150019 (DHX35-001) 2930889-2945990 protein_coding
CIL_0006RV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101452-ENSG00000204103 CGP 9606 20:38962299-40689240
GeneTranscriptPositionBiotype
ENSG00000101452 (DHX35)
DEAH (Asp-Glu-Ala-His) box polypeptide 35 		ENST00000252011 (DHX35-001) 38962335-39039723 protein_coding
ENST00000373323 (DHX35-008) 38962344-39038847 protein_coding
ENST00000373325 (DHX35-002) 38962299-39039721 protein_coding
ENST00000449559 (DHX35-006) 39021873-39038646 protein_coding
ENST00000482619 (DHX35-007) 39030360-39038636 retained_intron
ENST00000484417 (DHX35-003) 38962360-39039721 nonsense_mediated_decay
ENST00000493450 (DHX35-004) 39029178-39039723 retained_intron
ENSG00000204103 (MAFB)
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B 		ENST00000373313 (MAFB-001) 40685848-40689240 protein_coding
ENSG00000223410 (RP1-191L6.2)
 ENST00000445278 (RP1-191L6.2-001) 40121041-40126357 lincRNA
ENSG00000223864 (NPM1P19)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 19 		ENST00000450070 (NPM1P19-001) 38977711-38978422 processed_pseudogene
ENSG00000230324 (RP4-705O1.1)
 ENST00000412672 (RP4-705O1.1-001) 39213777-39224748 lincRNA
ENSG00000233415 (RP11-101E14.3)
 ENST00000423153 (RP11-101E14.3-001) 40031585-40043889 lincRNA
ENSG00000234878 (HSPE1P1)
heat shock 10kDa protein 1 pseudogene 1 		ENST00000421494 (HSPE1P1-001) 39932922-39933239 processed_pseudogene
ENSG00000237767 (LINC01370)
long intergenic non-protein coding RNA 1370 		ENST00000432633 (LINC01370-001) 40004477-40008245 lincRNA
ENST00000445606 (LINC01370-002) 40004484-40008529 lincRNA
ENSG00000275337 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000620379 (Metazoa_SRP.1-318) 39349094-39349392 misc_RNA
ENSG00000277581 (RP4-616B8.6)
 ENST00000615559 (RP4-616B8.6-001) 38962472-38962993 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RV_0001ENSDARG00000017121ENSDART00000002309ENSDARG00000063419ENSDART00000092679ENSDART00000150019CIL_0006RV_0002ENSG00000101452ENST00000252011ENST00000373323ENST00000373325ENST00000449559ENST00000482619ENST00000484417ENST00000493450ENSG00000204103ENST00000373313ENSG00000223410ENST00000445278ENSG00000223864ENST00000450070ENSG00000230324ENST00000412672ENSG00000233415ENST00000423153ENSG00000234878ENST00000421494ENSG00000237767ENST00000432633ENST00000445606ENSG00000275337ENST00000620379ENSG00000277581ENST00000615559
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RV_0001ENSDARG00000017121ENSDART00000002309ENSDARG00000063419ENSDART00000092679ENSDART00000150019CIL_0006RV_0002ENSG00000101452ENST00000252011ENST00000373323ENST00000373325ENST00000484417ENST00000493450ENSG00000204103ENST00000373313ENSG00000223410ENST00000445278ENSG00000223864ENST00000450070ENSG00000230324ENST00000412672ENSG00000233415ENST00000423153ENSG00000234878ENST00000421494ENSG00000237767ENST00000432633ENST00000445606ENSG00000275337ENST00000620379ENSG00000277581ENST00000615559
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017121 ENSDART00000002309 N/A N/A N/A 35.337±14.67 N/A N/A 16.959±7.33 28.314±10.17 1.600±0.00 N/A 31.468±0.00 N/A N/A N/A
ENSDARG00000063419 ENSDART00000092679 N/A N/A N/A 2.217±0.69 N/A N/A 1.351±0.00 N/A 0.435±0.00 N/A N/A N/A N/A N/A
ENSDART00000150019 N/A N/A N/A 5.955±2.47 N/A N/A 1.205±0.77 1.146±0.09 0.355±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101452 ENST00000252011 1.866±0.00 1.288±0.00 N/A 0.996±0.18 1.565±0.10 N/A 3.265±0.00 N/A 0.378±0.00 1.284±0.26 N/A 2.058±0.77 1.050±0.11 2.978±0.00
ENST00000373323 N/A N/A 0.221±0.00 0.667±0.00 N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A
ENST00000373325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 N/A
ENST00000449559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484417 N/A N/A 0.231±0.00 N/A N/A 0.753±0.11 0.293±0.00 2.806±0.00 N/A N/A N/A 2.175±1.06 0.668±0.00 2.072±0.00
ENST00000493450 N/A N/A N/A N/A 1.075±0.00 N/A N/A N/A 0.601±0.00 N/A N/A 0.392±0.00 N/A N/A
ENSG00000204103 ENST00000373313 16.295±0.00 16.152±0.00 1.226±0.00 3.986±3.09 9.115±4.73 1.580±0.55 3.541±2.89 9.451±4.82 3.998±1.73 5.352±2.11 2.073±1.08 4.896±2.09 11.804±1.16 3.720±1.95
ENSG00000223410 ENST00000445278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00
ENSG00000223864 ENST00000450070 N/A N/A N/A 0.048±0.00 N/A 0.305±0.28 0.015±0.00 N/A 0.055±0.00 N/A 0.015±0.00 0.416±0.38 N/A 0.020±0.00
ENSG00000230324 ENST00000412672 N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233415 ENST00000423153 N/A N/A N/A N/A N/A N/A N/A N/A 0.538±0.00 N/A N/A N/A N/A N/A
ENSG00000234878 ENST00000421494 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A
ENSG00000237767 ENST00000432633 N/A N/A N/A N/A N/A N/A 0.332±0.00 1.306±0.00 N/A N/A N/A N/A N/A N/A
ENST00000445606 N/A N/A N/A N/A N/A N/A N/A 3.103±0.00 4.104±0.00 N/A N/A N/A N/A N/A
ENSG00000275337 ENST00000620379 0.107±0.00 N/A N/A N/A N/A 2.098±0.00 N/A N/A N/A 0.646±0.00 N/A N/A N/A 0.125±0.00
ENSG00000277581 ENST00000615559 N/A N/A N/A N/A N/A 0.324±0.00 0.091±0.00 N/A 0.130±0.00 0.044±0.00 0.224±0.00 N/A 0.185±0.00 0.394±0.05

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