C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006S3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034568-ENSDARG00000030650 CGP 7955 23:26083687-26114709
GeneTranscriptPositionBiotype
ENSDARG00000030650 (r3hdml)
R3H domain containing-like
ENSDART00000039705 (r3hdml-201) 26110081-26114332 protein_coding
ENSDART00000138305 (r3hdml-001) 26108394-26114709 protein_coding
ENSDARG00000034568 (fitm2)
fat storage-inducing transmembrane protein 2
ENSDART00000041833 (fitm2-001) 26083687-26085438 protein_coding
CIL_0006S3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197296-ENSG00000101074 CGP 9606 20:44302838-44351235
GeneTranscriptPositionBiotype
ENSG00000101074 (R3HDML)
R3H domain containing-like
ENST00000217043 (R3HDML-001) 44336986-44351235 protein_coding
ENSG00000197296 (FITM2)
fat storage-inducing transmembrane protein 2
ENST00000396825 (FITM2-001) 44302838-44311169 protein_coding
ENSG00000201363 (Y_RNA)
Y RNA
ENST00000364493 (Y_RNA.1-447) 44344839-44344933 misc_RNA
ENSG00000226812 (RP5-881L22.5)
ENST00000430481 (RP5-881L22.5-002) 44350707-44352102 antisense
ENST00000438702 (RP5-881L22.5-001) 44347552-44355185 antisense
CIL_0006S3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048486-ENSMUSG00000078949 CGP 10090 2:163466379-163502612
GeneTranscriptPositionBiotype
ENSMUSG00000046840 (Hnf4aos)
hepatic nuclear factor 4 alpha, opposite strand
ENSMUST00000125811 (Hnf4aos-001) 163494194-163541692 antisense
ENSMUST00000128896 (Hnf4aos-003) 163493807-163541720 antisense
ENSMUST00000141329 (Hnf4aos-002) 163493807-163541720 antisense
ENSMUSG00000048486 (Fitm2)
fat storage-inducing transmembrane protein 2
ENSMUST00000109418 (Fitm2-001) 163466379-163472629 protein_coding
ENSMUSG00000078949 (R3hdml)
R3H domain containing-like
ENSMUST00000109416 (R3hdml-001) 163492318-163502612 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S3_0001ENSDARG00000030650ENSDART00000039705ENSDART00000138305ENSDARG00000034568ENSDART00000041833CIL_0006S3_0002ENSG00000101074ENST00000217043ENSG00000197296ENST00000396825ENSG00000201363ENST00000364493ENSG00000226812ENST00000430481ENST00000438702CIL_0006S3_0003ENSMUSG00000046840ENSMUST00000125811ENSMUST00000128896ENSMUST00000141329ENSMUSG00000048486ENSMUST00000109418ENSMUSG00000078949ENSMUST00000109416
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S3_0001ENSDARG00000030650ENSDART00000039705ENSDART00000138305ENSDARG00000034568ENSDART00000041833CIL_0006S3_0002ENSG00000101074ENST00000217043ENSG00000197296ENST00000396825ENSG00000201363ENST00000364493ENSG00000226812ENST00000430481ENST00000438702CIL_0006S3_0003ENSMUSG00000046840ENSMUST00000125811ENSMUST00000128896ENSMUST00000141329ENSMUSG00000048486ENSMUST00000109418ENSMUSG00000078949ENSMUST00000109416
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030650 ENSDART00000039705 N/A N/A N/A 0.352±0.12 N/A N/A 0.170±0.03 0.355±0.00 0.061±0.00 N/A N/A N/A N/A N/A
ENSDART00000138305 N/A N/A N/A 0.100±0.00 N/A N/A 0.733±0.34 0.758±0.24 N/A N/A 0.660±0.00 N/A N/A N/A
ENSDARG00000034568 ENSDART00000041833 N/A N/A N/A 7.522±1.16 N/A N/A 18.060±6.41 8.865±1.09 3.434±0.00 N/A 7.304±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101074 ENST00000217043 N/A N/A N/A 0.018±0.00 N/A 0.117±0.00 0.043±0.00 N/A N/A N/A N/A N/A N/A 0.286±0.00
ENSG00000197296 ENST00000396825 6.025±0.00 2.947±0.00 0.633±0.00 2.401±1.14 5.972±4.97 2.303±1.67 25.053±17.47 3.768±3.07 1.902±0.75 1.190±0.27 2.154±1.00 2.417±1.31 1.129±0.13 3.397±0.74
ENSG00000201363 ENST00000364493 N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226812 ENST00000430481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00
ENST00000438702 N/A N/A N/A N/A N/A 0.352±0.00 0.034±0.00 0.131±0.00 0.236±0.00 N/A N/A 1.776±0.98 N/A 0.210±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046840 ENSMUST00000125811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.00 N/A
ENSMUST00000128896 N/A N/A N/A N/A N/A N/A N/A 2.643±0.01 N/A N/A N/A 0.249±0.14 N/A N/A
ENSMUST00000141329 N/A N/A N/A N/A N/A 0.126±0.00 N/A 13.030±1.79 4.236±4.01 N/A N/A 0.205±0.11 0.374±0.12 0.069±0.00
ENSMUSG00000048486 ENSMUST00000109418 23.454±6.31 40.842±1.74 2.246±0.00 2.147±0.32 27.168±4.82 5.333±0.34 35.269±6.68 9.446±1.03 5.621±4.57 11.293±3.36 19.286±2.85 8.773±2.48 1.057±0.49 0.974±0.49
ENSMUSG00000078949 ENSMUST00000109416 N/A N/A N/A 0.026±0.01 4.231±1.23 0.509±0.17 N/A 1.360±0.48 0.013±0.00 0.026±0.00 0.033±0.00 0.611±0.26 0.065±0.03 N/A

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