C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006SV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169439-ENSG00000104324 CGP 9606 8:96493351-97149654
GeneTranscriptPositionBiotype
ENSG00000104324 (CPQ)
carboxypeptidase Q 		ENST00000220763 (CPQ-001) 96645227-97143501 protein_coding
ENST00000517742 (CPQ-006) 96645375-96835097 protein_coding
ENST00000519484 (CPQ-003) 96760974-96785310 protein_coding
ENST00000519900 (CPQ-005) 96645371-96785292 protein_coding
ENST00000521142 (CPQ-004) 96761240-96785287 protein_coding
ENST00000522617 (CPQ-007) 97029469-97149654 protein_coding
ENST00000525310 (CPQ-010) 96732292-96785328 processed_transcript
ENST00000529551 (CPQ-008) 97055527-97092936 processed_transcript
ENST00000532528 (CPQ-009) 97055527-97092710 processed_transcript
ENST00000621294 (CPQ-201) 96784874-97143501 protein_coding
ENSG00000169439 (SDC2)
syndecan 2 		ENST00000302190 (SDC2-001) 96493351-96611780 protein_coding
ENST00000518385 (SDC2-002) 96493813-96610174 protein_coding
ENST00000519587 (SDC2-007) 96493813-96538816 processed_transcript
ENST00000519914 (SDC2-003) 96580349-96610100 protein_coding
ENST00000520233 (SDC2-008) 96493813-96537343 processed_transcript
ENST00000521590 (SDC2-004) 96584945-96609440 protein_coding
ENST00000522911 (SDC2-006) 96494008-96609643 protein_coding
ENST00000523877 (SDC2-005) 96586387-96609465 protein_coding
ENSG00000270077 (KB-1958F4.1)
 ENST00000602771 (KB-1958F4.1-001) 97144170-97144723 sense_intronic
ENSG00000272249 (KB-1958F4.2)
 ENST00000606010 (KB-1958F4.2-001) 97132835-97133379 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006SV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022261-ENSMUSG00000039007 CGP 10090 15:32920723-33594552
GeneTranscriptPositionBiotype
ENSMUSG00000022261 (Sdc2)
syndecan 2 		ENSMUST00000022871 (Sdc2-001) 32920723-33034730 protein_coding
ENSMUST00000147013 (Sdc2-002) 32920774-32921305 processed_transcript
ENSMUSG00000039007 (Cpq)
carboxypeptidase Q 		ENSMUST00000042167 (Cpq-201) 33083129-33594552 protein_coding
ENSMUSG00000058101 (1700084J12Rik)
RIKEN cDNA 1700084J12 gene 		ENSMUST00000079057 (1700084J12Rik-001) 33405206-33405939 transcribed_processed_pseudogene
ENSMUST00000187707 (1700084J12Rik-002) 33403985-33405976 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SV_0001ENSG00000104324ENST00000220763ENST00000517742ENST00000519484ENST00000519900ENST00000521142ENST00000522617ENST00000525310ENST00000529551ENST00000532528ENST00000621294ENSG00000169439ENST00000302190ENST00000518385ENST00000519587ENST00000519914ENST00000520233ENST00000521590ENST00000522911ENST00000523877ENSG00000270077ENST00000602771ENSG00000272249ENST00000606010CIL_0006SV_0002ENSMUSG00000022261ENSMUST00000022871ENSMUST00000147013ENSMUSG00000039007ENSMUST00000042167ENSMUSG00000058101ENSMUST00000079057ENSMUST00000187707
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SV_0001ENSG00000104324ENST00000220763ENST00000517742ENST00000621294ENSG00000169439ENST00000302190ENST00000518385ENST00000519914ENST00000520233ENST00000522911ENSG00000270077ENST00000602771ENSG00000272249ENST00000606010CIL_0006SV_0002ENSMUSG00000022261ENSMUST00000022871ENSMUST00000147013ENSMUSG00000039007ENSMUST00000042167ENSMUSG00000058101ENSMUST00000079057ENSMUST00000187707
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104324 ENST00000220763 3.863±0.00 2.865±0.00 N/A 3.054±0.00 4.723±2.08 6.018±0.00 9.555±0.00 5.745±0.00 3.249±0.80 8.977±0.00 1.605±0.00 14.111±9.93 6.440±2.08 7.872±0.00
ENST00000517742 N/A N/A N/A N/A 3.364±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621294 14.239±0.00 15.724±0.00 6.421±0.00 4.972±2.05 9.938±6.71 15.175±7.99 2.429±0.31 14.537±5.06 8.563±1.35 11.354±3.65 2.223±0.17 28.152±26.49 21.814±5.63 15.071±6.15
ENSG00000169439 ENST00000302190 10.876±0.00 7.025±0.00 4.514±0.00 3.045±1.86 12.848±5.05 13.657±9.42 4.105±1.87 19.813±9.40 10.741±6.11 11.832±8.47 1.589±0.48 16.057±10.31 17.064±2.11 9.761±0.00
ENST00000518385 10.116±0.00 5.058±0.00 N/A 4.071±0.00 15.792±0.00 16.672±0.00 5.145±0.00 9.937±0.00 15.830±0.00 8.836±6.51 3.617±0.00 N/A N/A 6.496±2.68
ENST00000519587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.049±0.00 N/A N/A N/A
ENST00000520233 N/A N/A 10.214±0.00 11.724±0.00 26.024±0.00 11.534±0.00 9.309±0.00 105.060±0.00 30.635±0.00 N/A 6.427±0.00 16.379±0.90 107.311±0.00 N/A
ENST00000521590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522911 15.201±0.00 N/A 13.529±0.00 11.027±0.91 30.037±0.00 23.028±8.14 9.872±0.00 138.583±0.00 35.129±0.00 12.142±0.00 6.177±0.00 12.662±8.61 33.867±0.00 8.082±0.00
ENST00000523877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270077 ENST00000602771 0.016±0.00 0.139±0.00 N/A 0.144±0.00 0.246±0.02 0.516±0.34 0.106±0.00 N/A 0.933±0.00 0.048±0.01 N/A 0.235±0.18 0.172±0.00 0.143±0.01
ENSG00000272249 ENST00000606010 N/A 0.095±0.00 N/A 0.032±0.00 N/A N/A N/A N/A 0.181±0.00 N/A N/A 0.698±0.90 N/A 0.165±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022261 ENSMUST00000022871 19.397±2.63 18.123±2.88 27.164±1.31 4.321±0.19 12.821±1.57 15.669±0.96 8.662±0.68 14.171±1.50 26.386±16.99 19.470±1.01 1.992±0.30 21.245±5.80 2.871±2.38 1.295±0.67
ENSMUST00000147013 N/A 44.392±6.33 N/A N/A 10.911±1.86 13.230±1.67 N/A N/A 24.969±1.17 N/A N/A 52.795±0.00 N/A N/A
ENSMUSG00000039007 ENSMUST00000042167 40.102±7.37 21.273±1.45 39.872±8.47 2.518±1.59 23.962±7.01 22.481±3.02 16.157±4.41 24.352±6.72 23.222±11.44 27.197±3.07 5.148±0.55 24.906±5.98 2.899±2.90 9.465±3.94
ENSMUSG00000058101 ENSMUST00000079057 0.061±0.02 0.191±0.00 N/A 0.023±0.00 0.243±0.03 0.110±0.06 0.192±0.00 0.106±0.04 0.028±0.01 0.085±0.00 N/A 0.034±0.00 0.067±0.01 0.612±0.18
ENSMUST00000187707 0.090±0.07 0.146±0.00 N/A 0.031±0.02 0.027±0.00 N/A 0.110±0.00 0.039±0.00 0.043±0.04 0.034±0.00 N/A 0.012±0.00 0.016±0.01 0.523±0.25

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