C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006T7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166716-ENSG00000136383 CGP 9606 15:84748635-84873482
GeneTranscriptPositionBiotype
ENSG00000136383 (ALPK3)
alpha-kinase 3 		ENST00000258888 (ALPK3-001) 84816680-84873482 protein_coding
ENST00000558077 (ALPK3-002) 84863529-84868212 retained_intron
ENSG00000166716 (ZNF592)
zinc finger protein 592 		ENST00000299927 (ZNF592-201) 84782654-84806430 protein_coding
ENST00000559607 (ZNF592-003) 84778260-84802438 nonsense_mediated_decay
ENST00000560079 (ZNF592-001) 84748635-84806432 protein_coding
ENST00000618477 (ZNF592-004) 84803734-84804799 processed_transcript
ENSG00000259415 (RP11-7M10.2)
 ENST00000559666 (RP11-7M10.2-001) 84753122-84754502 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0006T7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005621-ENSMUSG00000038763 CGP 10090 7:80993681-81105612
GeneTranscriptPositionBiotype
ENSMUSG00000005621 (Zfp592)
zinc finger protein 592 		ENSMUST00000107353 (Zfp592-001) 80993681-81045164 protein_coding
ENSMUST00000125137 (Zfp592-003) 81038015-81041453 retained_intron
ENSMUST00000149508 (Zfp592-002) 81037739-81038300 retained_intron
ENSMUST00000176477 (Zfp592-004) 81023420-81024593 processed_transcript
ENSMUSG00000038763 (Alpk3)
alpha-kinase 3 		ENSMUST00000107348 (Alpk3-001) 81057600-81105612 protein_coding
ENSMUST00000151115 (Alpk3-002) 81094831-81095693 retained_intron
ENSMUSG00000085194 (Gm16012)
predicted gene 16012 		ENSMUST00000148597 (Gm16012-001) 81059113-81066307 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006T7_0001ENSG00000136383ENST00000258888ENST00000558077ENSG00000166716ENST00000299927ENST00000559607ENST00000560079ENST00000618477ENSG00000259415ENST00000559666CIL_0006T7_0002ENSMUSG00000005621ENSMUST00000107353ENSMUST00000125137ENSMUST00000149508ENSMUST00000176477ENSMUSG00000038763ENSMUST00000107348ENSMUST00000151115ENSMUSG00000085194ENSMUST00000148597
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006T7_0001ENSG00000136383ENST00000258888ENSG00000166716ENST00000299927ENST00000559607ENST00000560079ENSG00000259415ENST00000559666CIL_0006T7_0002ENSMUSG00000005621ENSMUST00000107353ENSMUSG00000038763ENSMUST00000107348ENSMUSG00000085194ENSMUST00000148597
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136383 ENST00000258888 2.532±0.00 0.373±0.00 N/A 0.670±0.00 1.929±1.82 1.342±0.00 11.031±10.00 1.711±1.53 1.279±0.12 2.281±1.57 54.919±31.13 0.365±0.24 0.425±0.03 1.930±0.00
ENST00000558077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166716 ENST00000299927 1.130±0.00 3.032±0.00 N/A 0.262±0.00 N/A 1.128±0.00 0.348±0.00 2.810±0.00 1.409±0.00 0.690±0.40 N/A 2.598±1.18 0.819±0.33 2.120±0.98
ENST00000559607 2.678±0.00 N/A N/A 1.832±1.31 2.545±1.56 1.088±0.00 2.293±0.00 1.503±0.00 0.826±0.00 1.777±0.00 7.193±5.17 1.909±1.09 1.758±0.72 4.319±0.00
ENST00000560079 2.066±0.00 1.239±0.00 1.658±0.00 0.571±0.36 1.703±0.21 N/A 2.066±0.00 1.565±0.09 0.775±0.33 0.307±0.00 5.120±0.00 2.538±1.64 0.964±0.55 3.870±0.00
ENST00000618477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259415 ENST00000559666 N/A 0.075±0.00 N/A 1.209±0.00 N/A 0.435±0.00 0.634±0.00 N/A 0.044±0.00 0.642±0.00 N/A 0.114±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005621 ENSMUST00000107353 6.223±1.18 6.632±0.78 4.100±0.14 3.314±1.49 8.252±1.36 5.790±0.93 3.448±0.32 5.126±1.00 3.699±1.20 6.013±1.81 3.029±0.23 8.734±2.49 6.089±2.62 3.794±1.41
ENSMUST00000125137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038763 ENSMUST00000107348 0.046±0.02 0.018±0.01 0.014±0.00 0.069±0.05 1.068±1.09 0.023±0.01 10.589±0.81 0.130±0.15 0.028±0.02 0.170±0.12 31.905±8.34 0.649±0.23 0.310±0.09 0.196±0.21
ENSMUST00000151115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085194 ENSMUST00000148597 0.171±0.00 0.656±0.00 0.045±0.01 0.587±0.28 0.856±0.48 N/A 0.248±0.07 0.209±0.01 0.148±0.15 N/A 0.204±0.13 1.534±0.73 0.127±0.03 0.175±0.00

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