C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006U3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088116-ENSDARG00000005704 CGP 7955 8:26155115-26182910
GeneTranscriptPositionBiotype
ENSDARG00000011553 (atp5f1)
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 		ENSDART00000009682 (atp5f1-201) 26183349-26189123 protein_coding
ENSDART00000131616 (atp5f1-001) 26182436-26191652 protein_coding
ENSDART00000137577 (atp5f1-003) 26183346-26189093 retained_intron
ENSDART00000147329 (atp5f1-002) 26183496-26189116 retained_intron
ENSDARG00000088116 (gstm3)
glutathione S-transferase M3 (brain) 		ENSDART00000046182 (gstm3-001) 26155115-26158232 protein_coding
ENSDART00000141687 (gstm3-003) 26158412-26159957 retained_intron
ENSDART00000145316 (gstm3-002) 26155115-26159952 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006U3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134202-ENSG00000198758 CGP 9606 1:109733932-109764027
GeneTranscriptPositionBiotype
ENSG00000134202 (GSTM3)
glutathione S-transferase mu 3 (brain) 		ENST00000256594 (GSTM3-201) 109733932-109740516 protein_coding
ENST00000361066 (GSTM3-001) 109736494-109741038 protein_coding
ENST00000476321 (GSTM3-003) 109736975-109738143 processed_transcript
ENST00000486823 (GSTM3-002) 109736930-109740327 processed_transcript
ENST00000488824 (GSTM3-004) 109736976-109740301 processed_transcript
ENST00000540225 (GSTM3-202) 109737365-109740304 protein_coding
ENSG00000198758 (EPS8L3)
EPS8-like 3 		ENST00000361852 (EPS8L3-003) 109750080-109763924 protein_coding
ENST00000361965 (EPS8L3-002) 109750309-109763904 protein_coding
ENST00000369805 (EPS8L3-001) 109750081-109764027 protein_coding
ENST00000472325 (EPS8L3-009) 109751533-109763920 nonsense_mediated_decay
ENST00000475725 (EPS8L3-006) 109751395-109752074 processed_transcript
ENST00000477568 (EPS8L3-010) 109761224-109763923 processed_transcript
ENST00000482453 (EPS8L3-007) 109751759-109752323 processed_transcript
ENST00000489465 (EPS8L3-005) 109751288-109751940 processed_transcript
ENST00000494151 (EPS8L3-008) 109758355-109759591 processed_transcript
ENST00000498743 (EPS8L3-004) 109750356-109751546 processed_transcript

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U3_0001ENSDARG00000011553ENSDART00000009682ENSDART00000131616ENSDART00000137577ENSDART00000147329ENSDARG00000088116ENSDART00000046182ENSDART00000141687ENSDART00000145316CIL_0006U3_0002ENSG00000134202ENST00000256594ENST00000361066ENST00000476321ENST00000486823ENST00000488824ENST00000540225ENSG00000198758ENST00000361852ENST00000361965ENST00000369805ENST00000472325ENST00000475725ENST00000477568ENST00000482453ENST00000489465ENST00000494151ENST00000498743
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U3_0001ENSDARG00000011553ENSDART00000009682ENSDART00000131616ENSDARG00000088116ENSDART00000046182ENSDART00000141687ENSDART00000145316CIL_0006U3_0002ENSG00000134202ENST00000256594ENST00000361066ENST00000486823ENST00000488824ENST00000540225ENSG00000198758ENST00000361852ENST00000361965ENST00000369805ENST00000472325ENST00000475725ENST00000482453ENST00000494151ENST00000498743
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011553 ENSDART00000009682 N/A N/A N/A 194.711±18.69 N/A N/A 804.994±92.49 265.075±0.00 40.845±0.00 N/A 353.317±0.00 N/A N/A N/A
ENSDART00000131616 N/A N/A N/A 13.565±3.43 N/A N/A 4.041±1.66 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000088116 ENSDART00000046182 N/A N/A N/A 0.373±0.17 N/A N/A N/A N/A 0.148±0.00 N/A 0.260±0.00 N/A N/A N/A
ENSDART00000141687 N/A N/A N/A 0.323±0.06 N/A N/A N/A 1.614±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000145316 N/A N/A N/A 1.058±0.30 N/A N/A 95.701±41.47 33.787±18.86 0.462±0.00 N/A 0.244±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134202 ENST00000256594 3.566±0.00 4.868±0.00 3.756±0.00 9.096±3.84 3.072±2.38 4.115±3.33 1.765±0.99 4.887±3.73 2.393±2.01 4.838±2.84 1.466±0.92 9.934±7.69 1.202±0.27 21.598±5.66
ENST00000361066 N/A N/A N/A N/A N/A N/A 7.165±0.00 15.686±0.00 0.701±0.00 N/A 4.912±0.00 24.851±8.10 3.494±0.76 64.900±18.93
ENST00000476321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486823 8.305±0.00 14.564±0.00 N/A N/A 2.075±0.00 19.607±0.00 N/A 39.264±0.00 1.270±0.00 N/A 12.440±0.00 19.804±14.78 6.178±3.51 139.603±0.00
ENST00000488824 N/A N/A N/A 28.124±0.00 38.071±0.00 N/A 29.829±0.00 19.298±0.00 3.771±0.00 42.456±0.00 N/A 56.051±0.00 N/A 164.221±0.00
ENST00000540225 7.885±0.00 N/A 22.533±0.00 26.441±0.00 3.434±0.00 8.134±0.00 16.039±0.00 9.100±0.00 10.479±0.00 N/A 9.090±0.50 15.608±2.90 7.642±4.19 473.222±0.00
ENSG00000198758 ENST00000361852 N/A N/A N/A N/A N/A 1.697±0.00 N/A N/A N/A N/A N/A 9.837±5.28 N/A N/A
ENST00000361965 0.018±0.00 N/A N/A N/A 0.438±0.00 2.938±0.00 N/A 0.013±0.00 N/A N/A N/A 7.309±7.28 0.029±0.00 N/A
ENST00000369805 0.048±0.00 N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A 2.424±0.00 N/A N/A
ENST00000472325 N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A 0.481±0.00
ENST00000475725 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A 0.147±0.00 N/A N/A
ENST00000477568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482453 N/A N/A N/A N/A 3.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.519±0.00
ENST00000489465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A
ENST00000498743 N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 0.039±0.00 N/A

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