C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006UG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014840-ENSDARG00000070164 CGP 7955 13:2942181-3011326
GeneTranscriptPositionBiotype
ENSDARG00000014840 (prph2b)
peripherin 2b (retinal degeneration, slow)
ENSDART00000020671 (prph2b-001) 2942181-2948003 protein_coding
ENSDARG00000070164 (ubr2)
ubiquitin protein ligase E3 component n-recognin 2
ENSDART00000102748 (ubr2-001) 2953084-2981404 protein_coding
ENSDART00000108517 (ubr2-201) 2953085-2971362 protein_coding
ENSDART00000114040 (ubr2-202) 2953873-3011326 protein_coding
CIL_0006UG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023978-ENSMUSG00000023977 CGP 10090 17:46910459-47010532
GeneTranscriptPositionBiotype
ENSMUSG00000023977 (Ubr2)
ubiquitin protein ligase E3 component n-recognin 2
ENSMUST00000113335 (Ubr2-201) 46928292-47010532 protein_coding
ENSMUST00000113337 (Ubr2-202) 46928292-47010532 protein_coding
ENSMUSG00000023978 (Prph2)
peripherin 2
ENSMUST00000024773 (Prph2-001) 46910459-46924933 protein_coding
ENSMUST00000162469 (Prph2-002) 46910478-46920347 retained_intron
ENSMUSG00000084572 (Gm23657)
predicted gene, 23657
ENSMUST00000122623 (Gm23657-201) 46992623-46992916 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UG_0001ENSDARG00000014840ENSDART00000020671ENSDARG00000070164ENSDART00000102748ENSDART00000108517ENSDART00000114040CIL_0006UG_0002ENSMUSG00000023977ENSMUST00000113335ENSMUST00000113337ENSMUSG00000023978ENSMUST00000024773ENSMUST00000162469ENSMUSG00000084572ENSMUST00000122623
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UG_0001ENSDARG00000014840ENSDART00000020671ENSDARG00000070164ENSDART00000102748ENSDART00000108517ENSDART00000114040CIL_0006UG_0002ENSMUSG00000023977ENSMUST00000113335ENSMUST00000113337ENSMUSG00000023978ENSMUST00000024773ENSMUST00000162469ENSMUSG00000084572ENSMUST00000122623
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014840 ENSDART00000020671 N/A N/A N/A 0.048±0.02 N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A
ENSDARG00000070164 ENSDART00000102748 N/A N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A 1.067±0.00 N/A N/A N/A
ENSDART00000108517 N/A N/A N/A 3.113±0.00 N/A N/A 2.923±3.38 4.023±1.17 1.213±0.00 N/A 3.041±0.00 N/A N/A N/A
ENSDART00000114040 N/A N/A N/A N/A N/A N/A N/A N/A 0.460±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023977 ENSMUST00000113335 3.708±2.08 11.956±4.73 6.149±1.37 4.948±1.84 7.370±0.77 2.502±0.43 7.157±2.57 3.623±0.67 4.023±1.14 3.686±1.52 13.151±1.74 7.263±2.48 5.516±1.89 2.017±0.72
ENSMUST00000113337 4.032±1.77 4.320±1.19 5.525±1.14 3.340±1.23 3.959±2.07 6.541±1.99 2.974±0.49 5.024±1.02 3.432±0.86 5.531±1.60 1.872±0.35 6.760±2.83 7.209±2.37 N/A
ENSMUSG00000023978 ENSMUST00000024773 N/A N/A 0.006±0.00 0.009±0.00 N/A N/A 0.011±0.00 0.022±0.01 0.018±0.02 N/A N/A 0.076±0.02 0.004±0.00 0.866±0.38
ENSMUST00000162469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 0.004±0.00 0.496±0.00
ENSMUSG00000084572 ENSMUST00000122623 0.275±0.01 0.581±0.18 0.169±0.02 0.063±0.00 0.904±0.27 0.393±0.05 0.228±0.00 N/A 0.261±0.21 0.413±0.13 0.394±0.00 0.391±0.00 0.142±0.10 N/A

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