C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006WG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119408-ENSG00000136930 CGP 9606 9:124257606-124415444
GeneTranscriptPositionBiotype
ENSG00000119408 (NEK6)
NIMA-related kinase 6 		ENST00000320246 (NEK6-002) 124257970-124353307 protein_coding
ENST00000373596 (NEK6-007) 124261473-124327445 protein_coding
ENST00000373600 (NEK6-003) 124257963-124353307 protein_coding
ENST00000373603 (NEK6-004) 124257606-124353307 protein_coding
ENST00000394199 (NEK6-201) 124292941-124352438 protein_coding
ENST00000422297 (NEK6-001) 124291979-124339608 protein_coding
ENST00000423785 (NEK6-009) 124286440-124326405 protein_coding
ENST00000425237 (NEK6-008) 124261473-124339614 protein_coding
ENST00000444973 (NEK6-005) 124258260-124339607 protein_coding
ENST00000447379 (NEK6-010) 124299985-124326438 protein_coding
ENST00000454453 (NEK6-006) 124258261-124347797 protein_coding
ENST00000539416 (NEK6-202) 124292420-124352438 protein_coding
ENST00000540326 (NEK6-203) 124257606-124352438 protein_coding
ENST00000545174 (NEK6-204) 124258251-124352438 protein_coding
ENST00000546191 (NEK6-205) 124291971-124352438 protein_coding
ENSG00000136930 (PSMB7)
proteasome (prosome, macropain) subunit, beta type, 7 		ENST00000259457 (PSMB7-001) 124353466-124415439 protein_coding
ENST00000441097 (PSMB7-003) 124396760-124415444 protein_coding
ENST00000466951 (PSMB7-006) 124412400-124415307 processed_transcript
ENST00000474081 (PSMB7-004) 124383596-124384656 processed_transcript
ENST00000478817 (PSMB7-005) 124383622-124384656 processed_transcript
ENST00000498485 (PSMB7-002) 124353466-124415291 processed_transcript
ENSG00000227200 (RP11-121A14.3)
 ENST00000437461 (RP11-121A14.3-001) 124262876-124265809 sense_intronic
ENSG00000235204 (RP11-121A14.2)
 ENST00000426157 (RP11-121A14.2-001) 124259250-124261156 antisense
CIL_0006WG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026749-ENSMUSG00000026750 CGP 10090 2:38511643-38644087
GeneTranscriptPositionBiotype
ENSMUSG00000026749 (Nek6)
NIMA (never in mitosis gene a)-related expressed kinase 6 		ENSMUST00000054234 (Nek6-001) 38511643-38588041 protein_coding
ENSMUST00000112895 (Nek6-003) 38511814-38585766 protein_coding
ENSMUST00000112902 (Nek6-002) 38511668-38587480 protein_coding
ENSMUST00000151683 (Nek6-004) 38514581-38557849 protein_coding
ENSMUST00000156726 (Nek6-005) 38514626-38560910 protein_coding
ENSMUSG00000026750 (Psmb7)
proteasome (prosome, macropain) subunit, beta type 7 		ENSMUST00000028083 (Psmb7-001) 38588036-38644087 protein_coding
ENSMUST00000151981 (Psmb7-002) 38613378-38643889 processed_transcript
ENSMUSG00000082931 (Gm13586)
predicted gene 13586 		ENSMUST00000121784 (Gm13586-001) 38622801-38623264 processed_pseudogene
ENSMUSG00000095278 (Gm27634)
predicted gene, 27634 		ENSMUST00000175060 (Gm27634-201) 38637018-38637143 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WG_0001ENSG00000119408ENST00000320246ENST00000373596ENST00000373600ENST00000373603ENST00000394199ENST00000422297ENST00000423785ENST00000425237ENST00000444973ENST00000447379ENST00000454453ENST00000539416ENST00000540326ENST00000545174ENST00000546191ENSG00000136930ENST00000259457ENST00000441097ENST00000466951ENST00000474081ENST00000478817ENST00000498485ENSG00000227200ENST00000437461ENSG00000235204ENST00000426157CIL_0006WG_0002ENSMUSG00000026749ENSMUST00000054234ENSMUST00000112895ENSMUST00000112902ENSMUST00000151683ENSMUST00000156726ENSMUSG00000026750ENSMUST00000028083ENSMUST00000151981ENSMUSG00000082931ENSMUST00000121784ENSMUSG00000095278ENSMUST00000175060
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WG_0001ENSG00000119408ENST00000320246ENST00000373600ENST00000394199ENST00000423785ENST00000425237ENST00000444973ENST00000545174ENST00000546191ENSG00000136930ENST00000259457ENST00000441097ENSG00000227200ENST00000437461ENSG00000235204ENST00000426157CIL_0006WG_0002ENSMUSG00000026749ENSMUST00000054234ENSMUST00000112895ENSMUST00000112902ENSMUST00000151683ENSMUSG00000026750ENSMUST00000028083ENSMUST00000151981ENSMUSG00000082931ENSMUST00000121784ENSMUSG00000095278ENSMUST00000175060
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119408 ENST00000320246 3.361±0.00 4.670±0.00 2.196±0.00 2.655±0.37 3.440±0.00 2.364±0.00 0.710±0.32 3.919±2.77 3.953±0.41 3.779±0.48 N/A 1.013±0.00 3.801±0.70 1.519±0.00
ENST00000373596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373600 N/A N/A N/A N/A 0.633±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394199 N/A N/A N/A N/A 2.336±0.00 N/A 0.406±0.00 3.178±0.00 N/A N/A 1.217±0.00 2.203±0.00 10.246±0.46 N/A
ENST00000422297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423785 N/A N/A N/A N/A N/A N/A 0.627±0.00 N/A 4.025±0.00 N/A N/A 2.594±0.00 N/A N/A
ENST00000425237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.590±0.00
ENST00000444973 N/A N/A N/A 12.592±0.00 N/A N/A N/A N/A N/A N/A N/A 24.514±0.00 32.646±0.00 5.925±0.00
ENST00000447379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545174 2.324±0.00 8.327±0.00 N/A 2.914±2.17 3.513±0.10 2.477±0.00 N/A 5.170±0.00 11.349±9.63 6.776±0.00 N/A 5.963±0.00 6.076±2.40 2.823±1.09
ENST00000546191 N/A N/A N/A N/A 1.231±0.00 N/A N/A N/A N/A 3.521±0.00 N/A N/A N/A N/A
ENSG00000136930 ENST00000259457 63.074±0.00 67.857±0.00 6.303±0.00 54.642±16.21 37.983±30.11 35.531±18.85 37.310±22.19 56.385±21.36 50.600±32.94 29.467±19.45 45.764±16.87 58.374±26.72 97.030±36.32 81.660±33.93
ENST00000441097 N/A N/A N/A N/A 4.910±0.00 N/A 4.462±0.00 N/A N/A N/A N/A 15.783±0.00 N/A N/A
ENST00000466951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227200 ENST00000437461 N/A 0.268±0.00 N/A 0.060±0.00 N/A N/A N/A 0.330±0.00 0.194±0.00 N/A N/A N/A N/A 1.794±0.00
ENSG00000235204 ENST00000426157 N/A N/A 1.677±0.00 0.278±0.00 1.451±0.00 0.060±0.00 0.288±0.07 0.065±0.00 0.257±0.14 3.171±0.00 N/A 0.521±0.37 N/A 0.613±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026749 ENSMUST00000054234 11.367±2.87 15.826±2.49 N/A 9.974±1.25 12.428±6.16 36.551±3.89 N/A 4.805±1.70 16.747±4.69 11.341±3.96 N/A 41.285±15.65 18.794±1.99 N/A
ENSMUST00000112895 17.577±6.25 N/A N/A 10.245±0.00 16.159±4.43 N/A N/A 5.075±0.00 8.961±0.00 6.100±0.65 N/A 10.613±3.53 37.990±17.13 N/A
ENSMUST00000112902 N/A 6.134±0.68 N/A N/A N/A N/A N/A N/A 10.254±1.28 N/A N/A 5.872±0.00 17.524±9.36 N/A
ENSMUST00000151683 N/A 63.572±6.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026750 ENSMUST00000028083 50.439±3.42 16.852±0.09 109.948±12.23 93.266±35.62 39.002±21.29 28.088±0.00 65.030±6.29 57.010±12.39 110.005±62.57 30.872±7.36 172.070±13.74 45.234±26.12 124.198±64.62 45.627±12.54
ENSMUST00000151981 41.098±7.78 44.865±8.69 N/A N/A 54.397±24.01 N/A 41.626±4.43 40.306±5.11 66.066±12.92 25.179±4.14 N/A 47.349±4.70 N/A 28.794±8.76
ENSMUSG00000082931 ENSMUST00000121784 0.223±0.18 0.217±0.01 0.148±0.00 0.518±0.23 0.313±0.12 0.265±0.07 0.171±0.04 0.215±0.10 1.071±1.52 0.172±0.05 0.162±0.00 0.661±0.20 0.263±0.08 0.162±0.06
ENSMUSG00000095278 ENSMUST00000175060 823.539±190.75 715.022±0.00 N/A 28.816±0.00 N/A N/A N/A 823.650±0.00 40.069±33.14 715.909±164.94 N/A 8.843±0.00 31.761±17.09 1305.092±435.49

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