C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006XG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000269307-ENSG00000160117 CGP 9606 19:17267418-17287646
GeneTranscriptPositionBiotype
ENSG00000105393 (BABAM1)
BRISC and BRCA1 A complex member 1 		ENST00000359435 (BABAM1-005) 17267386-17279337 protein_coding
ENST00000447614 (BABAM1-201) 17267376-17279048 protein_coding
ENST00000448635 (BABAM1-014) 17267478-17276555 processed_transcript
ENST00000594247 (BABAM1-002) 17267376-17281249 nonsense_mediated_decay
ENST00000595393 (BABAM1-003) 17267443-17277523 retained_intron
ENST00000595632 (BABAM1-011) 17267502-17279172 protein_coding
ENST00000596335 (BABAM1-013) 17267471-17276556 protein_coding
ENST00000598188 (BABAM1-001) 17267350-17279337 protein_coding
ENST00000598382 (BABAM1-017) 17276428-17278984 retained_intron
ENST00000598567 (BABAM1-012) 17268997-17279339 protein_coding
ENST00000599057 (BABAM1-007) 17267443-17274185 protein_coding
ENST00000599474 (BABAM1-006) 17267437-17276525 protein_coding
ENST00000601043 (BABAM1-004) 17267443-17279337 protein_coding
ENST00000601171 (BABAM1-008) 17267457-17274173 nonsense_mediated_decay
ENST00000601232 (BABAM1-016) 17276814-17279342 nonsense_mediated_decay
ENST00000601436 (BABAM1-015) 17267474-17275825 protein_coding
ENST00000601938 (BABAM1-009) 17268559-17276550 protein_coding
ENST00000602066 (BABAM1-010) 17268685-17276602 protein_coding
ENSG00000269307 (CTD-2278I10.6)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000469159} 		ENST00000596542 (CTD-2278I10.6-001) 17267418-17282966 nonsense_mediated_decay
CIL_0006XG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031820-ENSMUSG00000046295 CGP 10090 8:71396855-71409904
GeneTranscriptPositionBiotype
ENSMUSG00000031820 (Babam1)
BRISC and BRCA1 A complex member 1 		ENSMUST00000002473 (Babam1-201) 71396855-71404772 protein_coding
ENSMUSG00000046295 (Ankle1)
ankyrin repeat and LEM domain containing 1 		ENSMUST00000119976 (Ankle1-001) 71406010-71409904 protein_coding
ENSMUST00000120725 (Ankle1-002) 71406024-71409483 protein_coding
ENSMUST00000124520 (Ankle1-003) 71406022-71409476 retained_intron
ENSMUST00000125290 (Ankle1-004) 71406016-71409868 retained_intron
ENSMUST00000136522 (Ankle1-005) 71407691-71409157 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XG_0001ENSG00000105393ENST00000359435ENST00000447614ENST00000448635ENST00000594247ENST00000595393ENST00000595632ENST00000596335ENST00000598188ENST00000598382ENST00000598567ENST00000599057ENST00000599474ENST00000601043ENST00000601171ENST00000601232ENST00000601436ENST00000601938ENST00000602066ENSG00000269307ENST00000596542CIL_0006XG_0002ENSMUSG00000031820ENSMUST00000002473ENSMUSG00000046295ENSMUST00000119976ENSMUST00000120725ENSMUST00000124520ENSMUST00000125290ENSMUST00000136522
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XG_0001ENSG00000105393ENST00000359435ENST00000595632ENST00000598188ENST00000599474ENST00000601043ENST00000601171ENST00000602066ENSG00000269307ENST00000596542CIL_0006XG_0002ENSMUSG00000031820ENSMUST00000002473ENSMUSG00000046295ENSMUST00000119976ENSMUST00000120725ENSMUST00000124520ENSMUST00000125290ENSMUST00000136522
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105393 ENST00000359435 N/A N/A 1.222±0.00 9.809±0.00 2.019±0.00 9.389±0.00 N/A N/A 3.458±0.00 2.071±0.00 8.554±0.00 15.005±6.03 29.481±0.00 13.826±0.00
ENST00000447614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595632 N/A N/A N/A 15.547±0.00 N/A 14.250±0.00 N/A N/A N/A N/A N/A N/A N/A 15.518±0.00
ENST00000596335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598188 12.468±0.00 N/A N/A 10.378±0.00 N/A N/A 2.146±0.00 N/A N/A 2.531±0.00 3.450±0.00 18.665±0.00 28.027±0.00 13.933±0.00
ENST00000598382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599474 N/A N/A N/A N/A 3.545±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601043 N/A 40.147±0.00 0.828±0.00 24.955±0.00 32.335±0.00 10.909±0.00 18.332±0.00 15.884±11.05 21.386±0.00 29.588±0.00 32.147±0.00 42.070±0.00 41.290±3.01 15.018±0.00
ENST00000601171 N/A N/A 2.825±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602066 N/A N/A 1.962±0.00 N/A N/A N/A N/A N/A 3.292±0.00 3.598±0.00 N/A N/A N/A N/A
ENSG00000269307 ENST00000596542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.384±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031820 ENSMUST00000002473 29.257±6.57 62.087±2.26 25.972±1.60 36.854±9.70 37.029±12.14 43.829±5.85 25.483±4.53 47.081±7.42 38.381±6.11 35.720±6.85 21.107±4.07 48.679±13.98 22.303±7.59 23.671±4.82
ENSMUSG00000046295 ENSMUST00000119976 0.143±0.00 0.344±0.00 0.365±0.09 1.337±1.14 N/A N/A 0.128±0.00 0.076±0.00 8.429±5.18 0.265±0.00 0.054±0.00 2.031±0.46 1.139±0.73 0.097±0.00
ENSMUST00000120725 N/A 0.405±0.19 N/A N/A N/A N/A N/A 0.111±0.00 0.026±0.00 0.251±0.00 N/A N/A N/A 0.048±0.00
ENSMUST00000124520 0.621±0.41 0.458±0.04 N/A 0.045±0.00 0.346±0.18 3.291±0.33 0.086±0.00 0.061±0.01 N/A N/A 0.046±0.01 3.014±0.69 0.290±0.21 0.166±0.00
ENSMUST00000125290 0.796±0.58 0.688±0.40 0.747±0.18 6.067±2.18 0.454±0.21 3.521±0.89 0.183±0.06 0.150±0.04 13.666±14.78 0.592±0.28 N/A 4.598±1.97 1.957±1.37 0.624±0.28
ENSMUST00000136522 N/A N/A N/A 0.137±0.00 N/A N/A N/A 0.186±0.00 0.087±0.00 N/A 0.120±0.00 N/A N/A 0.106±0.00

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