C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006XX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015824-ENSDARG00000005541 CGP 7955 4:11980752-12021242
GeneTranscriptPositionBiotype
ENSDARG00000005541 (wif1)
wnt inhibitory factor 1 		ENSDART00000016382 (wif1-001) 11996287-12021242 protein_coding
ENSDARG00000015824 (lemd3)
LEM domain containing 3 		ENSDART00000013604 (lemd3-001) 11981688-11994610 protein_coding
ENSDART00000108552 (lemd3-201) 11980752-11994533 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006XX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048661-ENSMUSG00000020218 CGP 10090 10:120923413-121100650
GeneTranscriptPositionBiotype
ENSMUSG00000020218 (Wif1)
Wnt inhibitory factor 1 		ENSMUST00000020439 (Wif1-001) 121033960-121100650 protein_coding
ENSMUST00000145691 (Wif1-002) 121083755-121100637 retained_intron
ENSMUST00000175867 (Wif1-003) 121034024-121100645 protein_coding
ENSMUSG00000048661 (Lemd3)
LEM domain containing 3 		ENSMUST00000119093 (Lemd3-002) 120923852-120979332 protein_coding
ENSMUST00000119944 (Lemd3-001) 120923413-120979332 protein_coding
ENSMUSG00000082936 (Gm16166)
predicted gene 16166 		ENSMUST00000118291 (Gm16166-001) 120928186-120928972 processed_pseudogene
ENSMUSG00000093030 (Gm23632)
predicted gene, 23632 		ENSMUST00000175289 (Gm23632-201) 120974301-120974425 miRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XX_0001ENSDARG00000005541ENSDART00000016382ENSDARG00000015824ENSDART00000013604ENSDART00000108552CIL_0006XX_0002ENSMUSG00000020218ENSMUST00000020439ENSMUST00000145691ENSMUST00000175867ENSMUSG00000048661ENSMUST00000119093ENSMUST00000119944ENSMUSG00000082936ENSMUST00000118291ENSMUSG00000093030ENSMUST00000175289
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XX_0001ENSDARG00000005541ENSDART00000016382ENSDARG00000015824ENSDART00000013604ENSDART00000108552CIL_0006XX_0002ENSMUSG00000020218ENSMUST00000020439ENSMUST00000145691ENSMUST00000175867ENSMUSG00000048661ENSMUST00000119093ENSMUST00000119944ENSMUSG00000082936ENSMUST00000118291ENSMUSG00000093030ENSMUST00000175289
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005541 ENSDART00000016382 N/A N/A N/A 0.942±0.67 N/A N/A 1.917±1.92 3.111±1.48 N/A N/A 0.310±0.00 N/A N/A N/A
ENSDARG00000015824 ENSDART00000013604 N/A N/A N/A N/A N/A N/A N/A N/A 1.026±0.00 N/A N/A N/A N/A N/A
ENSDART00000108552 N/A N/A N/A 3.171±0.93 N/A N/A 2.282±1.07 4.806±1.29 0.629±0.00 N/A 0.303±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020218 ENSMUST00000020439 1.451±0.06 0.109±0.05 2.636±0.03 2.774±0.27 1.225±0.40 1.354±0.18 4.207±0.15 1.075±0.21 0.645±0.38 2.416±0.18 0.290±0.19 0.497±0.16 0.091±0.02 0.239±0.12
ENSMUST00000145691 0.304±0.01 N/A N/A N/A 0.520±0.00 N/A N/A N/A 0.034±0.00 N/A 0.374±0.17 0.220±0.14 0.039±0.00 0.080±0.01
ENSMUST00000175867 N/A 0.048±0.00 N/A 0.263±0.00 0.332±0.08 N/A N/A N/A 0.029±0.01 N/A 0.218±0.00 0.192±0.06 0.017±0.00 0.028±0.00
ENSMUSG00000048661 ENSMUST00000119093 1.947±0.83 2.306±0.68 N/A 6.273±0.00 2.194±1.64 4.091±1.46 1.193±0.36 1.135±0.42 0.889±0.51 3.134±0.53 N/A 5.460±0.95 5.088±0.50 3.116±0.61
ENSMUST00000119944 1.212±0.27 2.064±0.00 4.085±0.39 5.906±3.30 0.872±0.14 N/A 0.827±0.50 1.660±0.45 1.926±0.90 1.622±0.48 2.396±0.28 2.593±1.44 4.461±1.99 1.464±0.63
ENSMUSG00000082936 ENSMUST00000118291 0.547±0.17 0.342±0.19 0.392±0.02 0.579±0.33 0.454±0.19 0.990±0.29 0.270±0.05 0.456±0.17 0.396±0.14 0.805±0.30 0.065±0.00 0.991±0.62 0.239±0.09 0.520±0.20
ENSMUSG00000093030 ENSMUST00000175289 N/A 1422.182±691.88 30.196±10.14 N/A 1159.270±0.00 1126.500±0.00 N/A 845.181±0.00 30.519±33.55 N/A N/A 2465.190±0.00 9.715±6.10 1774.890±0.00

Loading