C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006Y7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007349-ENSDARG00000035290 CGP 7955 5:46563399-46622445
GeneTranscriptPositionBiotype
ENSDARG00000007349 (dmrt1)
doublesex and mab-3 related transcription factor 1 		ENSDART00000044361 (dmrt1-201) 46563478-46609926 protein_coding
ENSDART00000124637 (dmrt1-001) 46563399-46609922 protein_coding
ENSDART00000126066 (dmrt1-202) 46563493-46584251 protein_coding
ENSDART00000128373 (dmrt1-003) 46563493-46584257 processed_transcript
ENSDART00000128825 (dmrt1-002) 46563399-46608358 protein_coding
ENSDART00000130428 (dmrt1-203) 46563399-46608357 protein_coding
ENSDART00000130918 (dmrt1-004) 46563493-46564915 retained_intron
ENSDART00000141316 (dmrt1-005) 46603319-46608729 processed_transcript
ENSDARG00000035290 (dmrt3a)
doublesex and mab-3 related transcription factor 3a 		ENSDART00000051146 (dmrt3a-001) 46619179-46622445 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006Y7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137090-ENSG00000064218 CGP 9606 9:841690-991731
GeneTranscriptPositionBiotype
ENSG00000064218 (DMRT3)
doublesex and mab-3 related transcription factor 3 		ENST00000190165 (DMRT3-001) 976964-991731 protein_coding
ENST00000417254 (DMRT3-002) 989837-990333 protein_coding
ENSG00000137090 (DMRT1)
doublesex and mab-3 related transcription factor 1 		ENST00000382276 (DMRT1-001) 841690-969090 protein_coding
ENST00000564322 (DMRT1-003) 841690-894985 retained_intron
ENST00000569227 (DMRT1-002) 842714-968515 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006Y7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024837-ENSMUSG00000042372 CGP 10090 19:25505618-25623920
GeneTranscriptPositionBiotype
ENSMUSG00000024837 (Dmrt1)
doublesex and mab-3 related transcription factor 1 		ENSMUST00000025755 (Dmrt1-001) 25505618-25604329 protein_coding
ENSMUST00000087525 (Dmrt1-004) 25505706-25603491 protein_coding
ENSMUST00000160814 (Dmrt1-002) 25505707-25560265 processed_transcript
ENSMUSG00000042372 (Dmrt3)
doublesex and mab-3 related transcription factor 3 		ENSMUST00000048935 (Dmrt3-201) 25610537-25623920 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Y7_0001ENSDARG00000007349ENSDART00000044361ENSDART00000124637ENSDART00000126066ENSDART00000128373ENSDART00000128825ENSDART00000130428ENSDART00000130918ENSDART00000141316ENSDARG00000035290ENSDART00000051146CIL_0006Y7_0002ENSG00000064218ENST00000190165ENST00000417254ENSG00000137090ENST00000382276ENST00000564322ENST00000569227CIL_0006Y7_0003ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000042372ENSMUST00000048935
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Y7_0001ENSDARG00000007349ENSDART00000044361ENSDART00000124637ENSDART00000126066ENSDART00000128373ENSDARG00000035290ENSDART00000051146CIL_0006Y7_0002ENSG00000064218ENST00000190165ENST00000417254ENSG00000137090ENST00000382276ENST00000564322ENST00000569227CIL_0006Y7_0003ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000042372ENSMUST00000048935
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007349 ENSDART00000044361 N/A N/A N/A 0.052±0.02 N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000124637 N/A N/A N/A 0.028±0.01 N/A N/A 1.076±0.27 1.348±0.08 N/A N/A N/A N/A N/A N/A
ENSDART00000126066 N/A N/A N/A N/A N/A N/A 1.616±0.00 N/A 0.028±0.00 N/A 0.058±0.00 N/A N/A N/A
ENSDART00000128373 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A 0.009±0.00 N/A 0.009±0.00 N/A N/A N/A
ENSDART00000128825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000035290 ENSDART00000051146 N/A N/A N/A 0.123±0.05 N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064218 ENST00000190165 0.775±0.00 0.800±0.00 N/A 0.295±0.20 0.669±0.49 0.117±0.00 0.022±0.00 N/A N/A 0.289±0.00 0.188±0.00 0.044±0.01 N/A 4.728±2.05
ENST00000417254 N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137090 ENST00000382276 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.398±3.12
ENST00000564322 N/A 0.031±0.00 N/A 0.023±0.00 0.011±0.00 N/A 0.059±0.00 N/A N/A 0.009±0.00 0.036±0.00 0.010±0.00 N/A N/A
ENST00000569227 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A 0.032±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024837 ENSMUST00000025755 N/A N/A 0.003±0.00 0.055±0.03 N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.017±0.00 0.377±0.20 4.076±1.69
ENSMUST00000087525 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.059±0.00 N/A N/A
ENSMUST00000160814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSMUSG00000042372 ENSMUST00000048935 0.030±0.01 N/A 0.018±0.01 0.722±0.73 0.017±0.01 0.013±0.00 0.164±0.04 0.022±0.00 0.013±0.01 0.280±0.12 N/A 0.024±0.00 0.285±0.19 0.339±0.12

Loading