C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060102-ENSDARG00000007349 CGP 7955 5:46465016-46609926
GeneTranscriptPositionBiotype
ENSDARG00000007349 (dmrt1)
doublesex and mab-3 related transcription factor 1 		ENSDART00000044361 (dmrt1-201) 46563478-46609926 protein_coding
ENSDART00000124637 (dmrt1-001) 46563399-46609922 protein_coding
ENSDART00000126066 (dmrt1-202) 46563493-46584251 protein_coding
ENSDART00000128373 (dmrt1-003) 46563493-46584257 processed_transcript
ENSDART00000128825 (dmrt1-002) 46563399-46608358 protein_coding
ENSDART00000130428 (dmrt1-203) 46563399-46608357 protein_coding
ENSDART00000130918 (dmrt1-004) 46563493-46564915 retained_intron
ENSDART00000141316 (dmrt1-005) 46603319-46608729 processed_transcript
ENSDARG00000060102 (kank1)
KN motif and ankyrin repeat domains 1 		ENSDART00000084370 (kank1-201) 46534497-46556975 protein_coding
ENSDART00000136521 (kank1-001) 46465016-46558627 protein_coding
ENSDART00000145299 (kank1-002) 46465016-46537281 protein_coding
ENSDART00000145624 (kank1-003) 46514878-46537310 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0006YF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107104-ENSG00000137090 CGP 9606 9:470291-969090
GeneTranscriptPositionBiotype
ENSG00000107104 (KANK1)
KN motif and ankyrin repeat domains 1 		ENST00000354485 (KANK1-002) 504703-734129 retained_intron
ENST00000382286 (KANK1-004) 734748-746104 protein_coding
ENST00000382289 (KANK1-003) 732442-746102 protein_coding
ENST00000382293 (KANK1-005) 706889-746103 protein_coding
ENST00000382297 (KANK1-007) 504716-746105 protein_coding
ENST00000382303 (KANK1-001) 470291-746105 protein_coding
ENST00000467541 (KANK1-008) 470592-484491 processed_transcript
ENST00000475690 (KANK1-000) 471467-476769 processed_transcript
ENST00000489369 (KANK1-006) 504702-746103 processed_transcript
ENST00000619269 (KANK1-201) 504695-746106 protein_coding
ENSG00000137090 (DMRT1)
doublesex and mab-3 related transcription factor 1 		ENST00000382276 (DMRT1-001) 841690-969090 protein_coding
ENST00000564322 (DMRT1-003) 841690-894985 retained_intron
ENST00000569227 (DMRT1-002) 842714-968515 protein_coding
ENSG00000202172 (RNU6-1327P)
RNA, U6 small nuclear 1327, pseudogene 		ENST00000365302 (RNU6-1327P-201) 558826-558930 snRNA
ENSG00000227155 (RP11-165F24.3)
 ENST00000415004 (RP11-165F24.3-001) 454304-492112 antisense
ENST00000585631 (RP11-165F24.3-013) 456201-460507 antisense
ENST00000585819 (RP11-165F24.3-003) 456521-470934 antisense
ENST00000585944 (RP11-165F24.3-014) 454432-456988 antisense
ENST00000586805 (RP11-165F24.3-002) 454585-470961 antisense
ENST00000588474 (RP11-165F24.3-011) 456530-466866 antisense
ENST00000588989 (RP11-165F24.3-010) 457004-467219 antisense
ENST00000589287 (RP11-165F24.3-006) 454447-469802 antisense
ENST00000589387 (RP11-165F24.3-007) 454576-469802 antisense
ENST00000590240 (RP11-165F24.3-012) 456211-460227 antisense
ENST00000590518 (RP11-165F24.3-009) 456545-467336 antisense
ENST00000591577 (RP11-165F24.3-005) 454457-469836 antisense
ENST00000592805 (RP11-165F24.3-008) 456518-467390 antisense
ENST00000593137 (RP11-165F24.3-004) 456204-470816 antisense
ENST00000608617 (RP11-165F24.3-015) 459716-466065 antisense
ENSG00000227914 (RP11-130C19.3)
 ENST00000421645 (RP11-130C19.3-001) 673478-685555 antisense
ENST00000608097 (RP11-130C19.3-002) 674124-677628 antisense
ENSG00000228115 (RP11-165F24.5)
 ENST00000442442 (RP11-165F24.5-001) 487774-495610 sense_intronic
ENSG00000229875 (EIF1P1)
eukaryotic translation initiation factor 1 pseudogene 1 		ENST00000421436 (EIF1P1-001) 659986-660326 processed_pseudogene
ENSG00000235330 (RP11-165F24.2)
 ENST00000455592 (RP11-165F24.2-001) 477856-478349 transcribed_processed_pseudogene
ENST00000598100 (RP11-165F24.2-002) 477750-478423 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0006YF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032702-ENSMUSG00000024837 CGP 10090 19:25236975-25604329
GeneTranscriptPositionBiotype
ENSMUSG00000024837 (Dmrt1)
doublesex and mab-3 related transcription factor 1 		ENSMUST00000025755 (Dmrt1-001) 25505618-25604329 protein_coding
ENSMUST00000087525 (Dmrt1-004) 25505706-25603491 protein_coding
ENSMUST00000160814 (Dmrt1-002) 25505707-25560265 processed_transcript
ENSMUSG00000032702 (Kank1)
KN motif and ankyrin repeat domains 1 		ENSMUST00000049400 (Kank1-001) 25236975-25434496 protein_coding
ENSMUST00000137260 (Kank1-003) 25395303-25409772 processed_transcript
ENSMUST00000146647 (Kank1-002) 25406699-25425984 protein_coding
ENSMUST00000155788 (Kank1-004) 25422239-25424508 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YF_0001ENSDARG00000007349ENSDART00000044361ENSDART00000124637ENSDART00000126066ENSDART00000128373ENSDART00000128825ENSDART00000130428ENSDART00000130918ENSDART00000141316ENSDARG00000060102ENSDART00000084370ENSDART00000136521ENSDART00000145299ENSDART00000145624CIL_0006YF_0002ENSG00000107104ENST00000354485ENST00000382286ENST00000382289ENST00000382293ENST00000382297ENST00000382303ENST00000467541ENST00000475690ENST00000489369ENST00000619269ENSG00000137090ENST00000382276ENST00000564322ENST00000569227ENSG00000202172ENST00000365302ENSG00000227155ENST00000415004ENST00000585631ENST00000585819ENST00000585944ENST00000586805ENST00000588474ENST00000588989ENST00000589287ENST00000589387ENST00000590240ENST00000590518ENST00000591577ENST00000592805ENST00000593137ENST00000608617ENSG00000227914ENST00000421645ENST00000608097ENSG00000228115ENST00000442442ENSG00000229875ENST00000421436ENSG00000235330ENST00000455592ENST00000598100CIL_0006YF_0003ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000032702ENSMUST00000049400ENSMUST00000137260ENSMUST00000146647ENSMUST00000155788
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YF_0001ENSDARG00000007349ENSDART00000044361ENSDART00000124637ENSDART00000126066ENSDART00000128373ENSDARG00000060102ENSDART00000084370CIL_0006YF_0002ENSG00000107104ENST00000354485ENST00000382286ENST00000382289ENST00000382293ENST00000382297ENST00000382303ENST00000489369ENST00000619269ENSG00000137090ENST00000382276ENST00000564322ENST00000569227ENSG00000202172ENST00000365302ENSG00000227155ENST00000415004ENST00000585631ENST00000585819ENST00000585944ENST00000586805ENST00000589287ENST00000590240ENST00000590518ENST00000591577ENST00000592805ENST00000593137ENSG00000227914ENST00000421645ENST00000608097ENSG00000228115ENST00000442442ENSG00000229875ENST00000421436ENSG00000235330ENST00000455592ENST00000598100CIL_0006YF_0003ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000032702ENSMUST00000049400ENSMUST00000137260ENSMUST00000146647
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007349 ENSDART00000044361 N/A N/A N/A 0.052±0.02 N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000124637 N/A N/A N/A 0.028±0.01 N/A N/A 1.076±0.27 1.348±0.08 N/A N/A N/A N/A N/A N/A
ENSDART00000126066 N/A N/A N/A N/A N/A N/A 1.616±0.00 N/A 0.028±0.00 N/A 0.058±0.00 N/A N/A N/A
ENSDART00000128373 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A 0.009±0.00 N/A 0.009±0.00 N/A N/A N/A
ENSDART00000128825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000060102 ENSDART00000084370 N/A N/A N/A 1.276±0.00 N/A N/A 6.940±0.00 2.542±0.00 N/A N/A 1.432±0.00 N/A N/A N/A
ENSDART00000136521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107104 ENST00000354485 N/A N/A 1.695±0.00 0.836±0.00 0.758±0.00 N/A 1.252±0.00 1.332±0.00 4.252±0.00 1.679±0.00 0.607±0.00 1.036±0.00 N/A N/A
ENST00000382286 N/A N/A N/A N/A N/A N/A N/A 7.130±0.00 5.439±0.00 N/A N/A 4.733±0.00 5.365±0.00 N/A
ENST00000382289 N/A 3.335±0.00 N/A N/A N/A 6.192±0.00 N/A N/A 8.240±0.00 2.589±0.00 N/A 5.585±0.00 N/A 11.019±0.00
ENST00000382293 3.182±0.00 1.252±0.00 1.478±0.00 1.506±0.00 10.613±0.00 2.934±0.00 N/A 3.338±0.00 N/A N/A N/A 2.127±0.53 2.184±0.36 N/A
ENST00000382297 8.043±0.00 3.205±0.00 3.148±0.00 3.048±1.61 14.595±11.76 5.280±0.00 18.790±12.92 7.022±1.13 5.617±1.74 2.784±1.32 5.028±3.02 4.939±2.91 15.349±12.38 7.124±1.24
ENST00000382303 N/A N/A 1.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A
ENST00000467541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489369 N/A 0.809±0.00 N/A 0.977±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619269 N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A N/A 2.013±0.00 3.518±0.00 N/A N/A
ENSG00000137090 ENST00000382276 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.398±3.12
ENST00000564322 N/A 0.031±0.00 N/A 0.023±0.00 0.011±0.00 N/A 0.059±0.00 N/A N/A 0.009±0.00 0.036±0.00 0.010±0.00 N/A N/A
ENST00000569227 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A 0.032±0.00 N/A N/A
ENSG00000202172 ENST00000365302 N/A N/A N/A 0.810±0.00 N/A N/A N/A N/A N/A N/A N/A 1.060±0.00 N/A 0.496±0.00
ENSG00000227155 ENST00000415004 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.11
ENST00000585631 N/A 0.781±0.00 N/A N/A N/A N/A N/A 0.484±0.00 0.090±0.00 0.943±0.00 N/A 0.099±0.03 N/A 0.077±0.00
ENST00000585819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.06
ENST00000585944 N/A N/A N/A 0.043±0.03 N/A 0.483±0.00 0.012±0.00 0.086±0.00 N/A 0.145±0.00 N/A 0.047±0.02 0.047±0.01 N/A
ENST00000586805 N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A
ENST00000589387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590240 0.137±0.00 N/A N/A 0.051±0.00 N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A 0.211±0.00
ENST00000590518 N/A N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.275±0.00
ENST00000592805 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000593137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 0.058±0.00 N/A
ENST00000608617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227914 ENST00000421645 0.046±0.00 0.070±0.00 N/A 0.045±0.03 N/A 0.182±0.00 0.065±0.00 N/A 0.109±0.00 0.271±0.00 N/A 0.203±0.18 N/A N/A
ENST00000608097 N/A N/A 1.861±0.00 N/A N/A N/A N/A N/A N/A 1.378±0.00 N/A N/A N/A N/A
ENSG00000228115 ENST00000442442 N/A 0.097±0.00 0.705±0.00 N/A N/A N/A 0.029±0.00 0.096±0.00 N/A 0.831±0.00 N/A 0.212±0.11 N/A 0.622±0.14
ENSG00000229875 ENST00000421436 N/A N/A N/A N/A 0.036±0.00 N/A 0.033±0.00 N/A N/A 1.389±0.00 N/A 0.123±0.00 N/A N/A
ENSG00000235330 ENST00000455592 0.090±0.00 N/A N/A N/A 0.232±0.13 N/A 0.057±0.00 0.295±0.00 N/A 1.123±0.00 N/A 0.221±0.15 0.178±0.14 1.148±0.00
ENST00000598100 0.063±0.00 0.066±0.00 0.852±0.00 N/A N/A 0.245±0.08 N/A N/A N/A N/A 0.183±0.00 0.355±0.28 0.225±0.00 0.161±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024837 ENSMUST00000025755 N/A N/A 0.003±0.00 0.055±0.03 N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.017±0.00 0.377±0.20 4.076±1.69
ENSMUST00000087525 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.059±0.00 N/A N/A
ENSMUST00000160814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSMUSG00000032702 ENSMUST00000049400 4.317±2.63 1.964±0.55 31.059±1.32 1.218±0.69 3.186±1.51 8.070±0.79 6.015±2.47 11.967±2.19 4.334±1.94 6.685±2.86 0.471±0.05 8.467±2.69 8.652±2.71 1.751±0.82
ENSMUST00000137260 N/A 5.154±0.00 N/A N/A 7.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146647 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.968±0.00 N/A 3.140±0.00 2.471±0.00 N/A
ENSMUST00000155788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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