C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077726-ENSDARG00000019459 CGP 7955 14:48963052-49005851
GeneTranscriptPositionBiotype
ENSDARG00000019459 (elf2a)
E74-like factor 2a (ets domain transcription factor) 		ENSDART00000038670 (elf2a-001) 48982810-49005851 protein_coding
ENSDARG00000077726 (ccrn4la)
CCR4 carbon catabolite repression 4-like a (S. cerevisiae) 		ENSDART00000113469 (ccrn4la-001) 48963052-48975762 protein_coding
CIL_0006YJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151014-ENSG00000109381 CGP 9606 4:139015789-139177218
GeneTranscriptPositionBiotype
ENSG00000109381 (ELF2)
E74-like factor 2 (ets domain transcription factor) 		ENST00000358635 (ELF2-002) 139057855-139084496 protein_coding
ENST00000379549 (ELF2-201) 139057717-139084414 protein_coding
ENST00000379550 (ELF2-202) 139057717-139139476 protein_coding
ENST00000394235 (ELF2-001) 139057220-139177218 protein_coding
ENST00000420916 (ELF2-009) 139060479-139084337 protein_coding
ENST00000504314 (ELF2-010) 139061937-139072220 retained_intron
ENST00000510408 (ELF2-006) 139058719-139084325 protein_coding
ENST00000511006 (ELF2-003) 139136771-139177218 retained_intron
ENST00000511184 (ELF2-004) 139101591-139177199 nonsense_mediated_decay
ENST00000512627 (ELF2-008) 139060601-139084224 protein_coding
ENST00000514577 (ELF2-011) 139061867-139073719 retained_intron
ENST00000514606 (ELF2-005) 139066010-139084338 retained_intron
ENST00000515489 (ELF2-013) 139028112-139060595 processed_transcript
ENSG00000151014 (CCRN4L)
CCR4 carbon catabolite repression 4-like (S. cerevisiae) 		ENST00000280614 (CCRN4L-001) 139015789-139045752 protein_coding
ENST00000515616 (CCRN4L-003) 139043072-139045105 retained_intron
ENSG00000179967 (PPP1R14BP3)
protein phosphatase 1, regulatory (inhibitor) subunit 14B pseudogene 3 		ENST00000509033 (PPP1R14BP3-001) 139114930-139115374 processed_pseudogene
ENSG00000240723 (RN7SL382P)
RNA, 7SL, cytoplasmic 382, pseudogene 		ENST00000482631 (RN7SL382P-201) 139100377-139100658 misc_RNA
ENSG00000252503 (RNU6-531P)
RNA, U6 small nuclear 531, pseudogene 		ENST00000516694 (RNU6-531P-201) 139055475-139055578 snRNA
ENSG00000264953 (AC093602.1)
 ENST00000580602 (AC093602.1-201) 139017493-139017579 miRNA
ENSG00000276396 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000615106 (Metazoa_SRP.1-369) 139155153-139155444 misc_RNA
CIL_0006YJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023087-ENSMUSG00000037174 CGP 10090 3:51224447-51340658
GeneTranscriptPositionBiotype
ENSMUSG00000023087 (Ccrn4l)
CCR4 carbon catabolite repression 4-like (S. cerevisiae) 		ENSMUST00000023849 (Ccrn4l-001) 51224447-51251644 protein_coding
ENSMUST00000144826 (Ccrn4l-002) 51240206-51251624 retained_intron
ENSMUST00000167780 (Ccrn4l-201) 51224470-51251631 protein_coding
ENSMUSG00000037174 (Elf2)
E74-like factor 2 		ENSMUST00000062009 (Elf2-002) 51255665-51340644 protein_coding
ENSMUST00000091144 (Elf2-001) 51255665-51340566 protein_coding
ENSMUST00000108051 (Elf2-004) 51255665-51277514 protein_coding
ENSMUST00000108053 (Elf2-003) 51255665-51277514 protein_coding
ENSMUST00000156983 (Elf2-008) 51266510-51277365 retained_intron
ENSMUST00000163748 (Elf2-201) 51255685-51325987 protein_coding
ENSMUST00000183338 (Elf2-005) 51264869-51340658 nonsense_mediated_decay
ENSMUST00000183463 (Elf2-006) 51255665-51340566 nonsense_mediated_decay
ENSMUST00000184677 (Elf2-007) 51264886-51277424 nonsense_mediated_decay
ENSMUSG00000087440 (4930577N17Rik)
RIKEN cDNA 4930577N17 gene 		ENSMUST00000139771 (4930577N17Rik-001) 51277571-51279805 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YJ_0001ENSDARG00000019459ENSDART00000038670ENSDARG00000077726ENSDART00000113469CIL_0006YJ_0002ENSG00000109381ENST00000358635ENST00000379549ENST00000379550ENST00000394235ENST00000420916ENST00000504314ENST00000510408ENST00000511006ENST00000511184ENST00000512627ENST00000514577ENST00000514606ENST00000515489ENSG00000151014ENST00000280614ENST00000515616ENSG00000179967ENST00000509033ENSG00000240723ENST00000482631ENSG00000252503ENST00000516694ENSG00000264953ENST00000580602ENSG00000276396ENST00000615106CIL_0006YJ_0003ENSMUSG00000023087ENSMUST00000023849ENSMUST00000144826ENSMUST00000167780ENSMUSG00000037174ENSMUST00000062009ENSMUST00000091144ENSMUST00000108051ENSMUST00000108053ENSMUST00000156983ENSMUST00000163748ENSMUST00000183338ENSMUST00000183463ENSMUST00000184677ENSMUSG00000087440ENSMUST00000139771
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YJ_0001ENSDARG00000019459ENSDART00000038670ENSDARG00000077726ENSDART00000113469CIL_0006YJ_0002ENSG00000109381ENST00000358635ENST00000379549ENST00000379550ENST00000394235ENST00000510408ENST00000511184ENST00000512627ENST00000514577ENSG00000151014ENST00000280614ENST00000515616ENSG00000179967ENST00000509033ENSG00000240723ENST00000482631ENSG00000252503ENST00000516694ENSG00000264953ENST00000580602ENSG00000276396ENST00000615106CIL_0006YJ_0003ENSMUSG00000023087ENSMUST00000023849ENSMUST00000144826ENSMUST00000167780ENSMUSG00000037174ENSMUST00000062009ENSMUST00000091144ENSMUST00000108051ENSMUST00000108053ENSMUST00000163748ENSMUST00000183338ENSMUSG00000087440ENSMUST00000139771
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019459 ENSDART00000038670 N/A N/A N/A 6.299±2.13 N/A N/A 8.450±2.09 7.688±0.63 0.699±0.00 N/A 3.015±0.00 N/A N/A N/A
ENSDARG00000077726 ENSDART00000113469 N/A N/A N/A 3.347±3.64 N/A N/A 10.953±8.42 4.107±0.00 3.625±0.00 N/A 19.099±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109381 ENST00000358635 2.322±0.00 5.414±0.00 N/A 1.480±0.00 3.849±0.00 3.180±0.00 2.222±0.00 1.876±0.00 1.261±0.00 3.868±0.00 2.227±0.00 4.366±2.08 2.671±0.31 5.111±0.00
ENST00000379549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.121±0.00 N/A N/A
ENST00000379550 2.908±0.00 1.529±0.00 1.797±0.00 2.269±0.57 2.779±1.71 2.560±0.52 1.649±0.14 2.889±0.99 5.053±4.58 5.803±0.74 2.239±0.04 2.503±0.63 3.386±2.27 15.100±9.79
ENST00000394235 1.007±0.00 N/A 1.542±0.00 N/A 1.389±0.00 N/A 0.456±0.00 0.722±0.00 0.252±0.00 2.908±0.00 N/A 1.122±0.07 N/A N/A
ENST00000420916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510408 4.496±0.00 6.562±0.00 N/A 2.150±0.00 3.477±0.00 2.807±0.00 1.398±0.51 2.771±0.00 N/A N/A 1.283±0.00 3.038±0.38 2.972±0.34 6.366±0.00
ENST00000511006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511184 N/A N/A 1.810±0.00 N/A 2.916±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.857±0.00
ENST00000514577 N/A N/A N/A N/A N/A N/A 2.897±0.00 5.163±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151014 ENST00000280614 N/A 0.807±0.00 1.533±0.00 1.788±0.00 0.950±0.00 N/A 1.033±0.10 2.330±1.54 1.224±0.43 1.353±0.76 2.848±2.37 0.880±0.28 1.924±0.25 1.262±0.00
ENST00000515616 N/A 1.505±0.00 N/A N/A N/A 0.375±0.00 N/A N/A N/A 2.593±0.00 1.112±0.00 N/A N/A N/A
ENSG00000179967 ENST00000509033 0.735±0.00 0.967±0.00 0.262±0.00 0.449±0.01 1.336±0.18 1.043±0.15 0.293±0.22 0.868±0.20 0.262±0.04 2.469±1.04 0.965±0.16 0.793±0.45 0.566±0.12 0.883±0.26
ENSG00000240723 ENST00000482631 0.313±0.00 N/A N/A N/A 0.069±0.00 N/A 0.062±0.00 N/A N/A 0.265±0.00 N/A N/A N/A N/A
ENSG00000252503 ENST00000516694 N/A N/A N/A N/A 2.879±0.00 0.633±0.00 N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A
ENSG00000264953 ENST00000580602 N/A N/A N/A N/A N/A N/A 0.415±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000276396 ENST00000615106 0.211±0.00 0.168±0.00 N/A 0.293±0.00 N/A N/A 0.206±0.00 0.373±0.00 N/A N/A N/A 0.964±0.00 N/A 0.168±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023087 ENSMUST00000023849 N/A 1.542±0.04 N/A N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A 3.126±1.63 N/A N/A
ENSMUST00000144826 8.420±0.63 2.998±0.83 10.147±1.59 3.848±1.16 7.317±1.80 8.901±0.70 4.743±0.32 6.100±0.70 8.196±6.63 6.995±0.37 6.914±0.82 5.983±2.99 73.784±25.75 4.495±1.33
ENSMUST00000167780 3.525±1.16 6.199±2.36 N/A N/A 4.518±1.07 18.495±3.11 5.826±0.86 1.891±0.00 5.883±5.19 2.016±0.18 N/A 4.386±1.82 N/A N/A
ENSMUSG00000037174 ENSMUST00000062009 6.231±2.71 5.085±0.00 5.326±0.81 4.875±1.11 3.912±0.00 4.601±0.30 N/A 2.428±0.32 6.703±2.01 7.129±1.52 1.985±0.46 7.878±3.01 6.396±0.20 21.044±6.50
ENSMUST00000091144 N/A N/A N/A N/A 4.362±0.00 N/A N/A N/A N/A N/A 2.067±0.00 N/A N/A N/A
ENSMUST00000108051 5.367±1.89 8.920±2.95 9.197±0.00 5.056±0.00 6.321±2.30 8.143±1.90 4.356±0.00 4.011±1.32 3.188±0.62 6.201±0.72 2.857±1.30 10.731±3.39 7.107±2.50 N/A
ENSMUST00000108053 2.547±0.44 4.317±0.35 4.517±0.00 N/A 5.864±2.18 3.197±0.36 N/A 2.400±0.68 1.929±0.57 6.801±0.00 N/A 7.609±2.06 3.371±0.34 N/A
ENSMUST00000156983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163748 2.610±0.22 N/A 3.195±0.58 6.985±0.81 N/A N/A 3.175±0.01 1.592±0.18 6.070±2.60 N/A 2.092±0.31 19.950±7.83 16.529±10.87 25.738±13.28
ENSMUST00000183338 N/A N/A N/A N/A N/A 7.668±0.00 N/A N/A N/A N/A N/A 14.148±0.00 N/A 53.976±0.00
ENSMUST00000183463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087440 ENSMUST00000139771 0.531±0.49 N/A 0.824±0.07 0.369±0.01 0.589±0.06 0.536±0.34 0.320±0.13 0.338±0.11 0.382±0.18 0.483±0.21 0.617±0.04 0.649±0.14 0.629±0.43 0.310±0.19

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