C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000051915-ENSDARG00000004713 CGP 7955 7:58784097-58882730
GeneTranscriptPositionBiotype
ENSDARG00000004713 (mad2l1)
MAD2 mitotic arrest deficient-like 1 (yeast) 		ENSDART00000028017 (mad2l1-001) 58874321-58882730 protein_coding
ENSDARG00000051915 (pde5ab)
phosphodiesterase 5A, cGMP-specific, b 		ENSDART00000073625 (pde5ab-201) 58784097-58864283 protein_coding
ENSDART00000126819 (pde5ab-003) 58784097-58824407 retained_intron
ENSDART00000138188 (pde5ab-001) 58784160-58864421 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006YP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138735-ENSG00000164109 CGP 9606 4:119494395-120067074
GeneTranscriptPositionBiotype
ENSG00000138735 (PDE5A)
phosphodiesterase 5A, cGMP-specific 		ENST00000264805 (PDE5A-002) 119498541-119627633 protein_coding
ENST00000354960 (PDE5A-001) 119494395-119628991 protein_coding
ENST00000394439 (PDE5A-201) 119494397-119628084 protein_coding
ENST00000420633 (PDE5A-003) 119596526-119628065 protein_coding
ENST00000502912 (PDE5A-004) 119538781-119542002 processed_transcript
ENST00000503412 (PDE5A-005) 119500823-119519099 protein_coding
ENST00000508914 (PDE5A-007) 119552441-119562972 retained_intron
ENST00000509612 (PDE5A-009) 119507653-119519642 retained_intron
ENST00000512450 (PDE5A-012) 119519079-119527276 processed_transcript
ENST00000512494 (PDE5A-006) 119502390-119505935 retained_intron
ENST00000512739 (PDE5A-008) 119521000-119543297 processed_transcript
ENST00000513594 (PDE5A-011) 119517060-119539098 processed_transcript
ENSG00000164109 (MAD2L1)
MAD2 mitotic arrest deficient-like 1 (yeast) 		ENST00000296509 (MAD2L1-001) 120055608-120067074 protein_coding
ENST00000333047 (MAD2L1-004) 120059437-120066833 nonsense_mediated_decay
ENST00000504707 (MAD2L1-003) 120059828-120066858 nonsense_mediated_decay
ENST00000511295 (MAD2L1-002) 120065451-120066821 retained_intron
ENST00000512484 (MAD2L1-005) 120059828-120061036 retained_intron
ENSG00000221245 (SNORA11)
Small nucleolar RNA SNORA11 		ENST00000408318 (SNORA11.1-203) 119569699-119569825 snoRNA
ENSG00000245958 (RP11-33B1.1)
 ENST00000498873 (RP11-33B1.1-006) 119488643-119552024 processed_transcript
ENST00000500559 (RP11-33B1.1-009) 119512373-119552025 processed_transcript
ENST00000502760 (RP11-33B1.1-008) 119494486-119500279 processed_transcript
ENST00000503038 (RP11-33B1.1-010) 119548206-119552025 retained_intron
ENST00000504422 (RP11-33B1.1-011) 119454839-119458238 processed_transcript
ENST00000506451 (RP11-33B1.1-007) 119494465-119498027 processed_transcript
ENST00000508519 (RP11-33B1.1-004) 119454839-119493437 processed_transcript
ENST00000510011 (RP11-33B1.1-003) 119454820-119497903 processed_transcript
ENST00000510844 (RP11-33B1.1-013) 119494426-119519566 processed_transcript
ENST00000511823 (RP11-33B1.1-001) 119457968-119461864 transcribed_unprocessed_pseudogene
ENST00000511950 (RP11-33B1.1-002) 119454791-119460244 processed_transcript
ENST00000513147 (RP11-33B1.1-012) 119460437-119461910 retained_intron
ENST00000515251 (RP11-33B1.1-005) 119454896-119461783 processed_transcript
ENSG00000250392 (RP11-700N1.1)
 ENST00000505122 (RP11-700N1.1-001) 119939540-119964293 lincRNA
ENSG00000250772 (LINC01365)
long intergenic non-protein coding RNA 1365 		ENST00000503266 (LINC01365-001) 119799089-119804515 lincRNA
ENST00000512219 (LINC01365-002) 119799096-119804500 lincRNA
ENSG00000250938 (RP11-679C8.2)
 ENST00000503073 (RP11-679C8.2-004) 120066958-120085579 antisense
ENST00000504106 (RP11-679C8.2-002) 120066970-120393722 antisense
ENST00000508362 (RP11-679C8.2-001) 120067511-120416766 antisense
ENST00000511064 (RP11-679C8.2-003) 120066958-120165892 antisense
ENSG00000253825 (RP11-96A1.5)
 ENST00000518701 (RP11-96A1.5-001) 120035033-120040615 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YP_0001ENSDARG00000004713ENSDART00000028017ENSDARG00000051915ENSDART00000073625ENSDART00000126819ENSDART00000138188CIL_0006YP_0002ENSG00000138735ENST00000264805ENST00000354960ENST00000394439ENST00000420633ENST00000502912ENST00000503412ENST00000508914ENST00000509612ENST00000512450ENST00000512494ENST00000512739ENST00000513594ENSG00000164109ENST00000296509ENST00000333047ENST00000504707ENST00000511295ENST00000512484ENSG00000221245ENST00000408318ENSG00000245958ENST00000498873ENST00000500559ENST00000502760ENST00000503038ENST00000504422ENST00000506451ENST00000508519ENST00000510011ENST00000510844ENST00000511823ENST00000511950ENST00000513147ENST00000515251ENSG00000250392ENST00000505122ENSG00000250772ENST00000503266ENST00000512219ENSG00000250938ENST00000503073ENST00000504106ENST00000508362ENST00000511064ENSG00000253825ENST00000518701
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YP_0001ENSDARG00000004713ENSDART00000028017ENSDARG00000051915ENSDART00000073625ENSDART00000126819ENSDART00000138188CIL_0006YP_0002ENSG00000138735ENST00000264805ENST00000354960ENST00000394439ENSG00000164109ENST00000296509ENST00000333047ENST00000504707ENST00000511295ENST00000512484ENSG00000221245ENST00000408318ENSG00000245958ENST00000498873ENST00000502760ENST00000503038ENST00000510011ENSG00000250392ENST00000505122ENSG00000250772ENST00000503266ENSG00000250938ENST00000503073ENST00000511064ENSG00000253825ENST00000518701
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004713 ENSDART00000028017 N/A N/A N/A 0.984±0.98 N/A N/A 1.084±0.19 20.127±23.73 0.918±0.00 N/A 0.713±0.00 N/A N/A N/A
ENSDARG00000051915 ENSDART00000073625 N/A N/A N/A 0.540±0.03 N/A N/A N/A N/A 0.194±0.00 N/A 0.355±0.00 N/A N/A N/A
ENSDART00000126819 N/A N/A N/A N/A N/A N/A 0.431±0.00 1.334±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000138188 N/A N/A N/A 0.797±0.04 N/A N/A 0.536±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138735 ENST00000264805 N/A N/A 1.428±0.00 N/A 5.325±0.00 7.090±0.00 1.040±0.00 N/A 6.157±0.00 N/A 0.982±0.00 N/A N/A N/A
ENST00000354960 0.878±0.00 1.924±0.00 N/A N/A 1.825±0.84 3.233±0.61 0.532±0.00 1.396±0.00 2.524±2.46 N/A 0.694±0.00 0.726±0.00 0.539±0.09 1.572±0.71
ENST00000394439 0.731±0.00 1.943±0.00 N/A N/A 1.850±0.72 2.234±0.00 1.242±0.00 N/A 9.571±0.00 4.887±3.10 1.692±0.00 0.955±0.04 0.842±0.21 3.766±2.00
ENST00000420633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164109 ENST00000296509 0.124±0.00 0.297±0.00 0.083±0.00 0.580±0.17 0.208±0.00 0.758±0.59 0.105±0.00 0.054±0.02 0.209±0.19 0.069±0.00 0.053±0.00 1.585±1.24 0.544±0.40 1.116±0.47
ENST00000333047 0.446±0.00 1.371±0.00 N/A 1.908±0.00 0.893±0.21 1.208±0.00 0.491±0.28 0.513±0.00 0.122±0.00 1.209±0.00 0.144±0.00 6.923±4.86 3.109±1.12 7.783±0.69
ENST00000504707 N/A 0.929±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511295 N/A N/A N/A 1.617±0.00 N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A N/A
ENST00000512484 N/A N/A N/A N/A 1.439±0.00 N/A N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A
ENSG00000221245 ENST00000408318 N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A
ENSG00000245958 ENST00000498873 N/A N/A N/A 3.846±0.00 N/A N/A N/A N/A N/A N/A N/A 3.894±0.00 N/A 7.789±0.00
ENST00000500559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502760 N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00 N/A N/A N/A N/A N/A
ENST00000503038 N/A N/A N/A 1.528±0.00 N/A N/A N/A 1.471±0.00 0.148±0.00 N/A N/A 1.089±0.00 N/A 2.631±0.00
ENST00000504422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.266±0.00 N/A 9.130±0.00
ENST00000510844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250392 ENST00000505122 N/A N/A N/A N/A N/A N/A 4.595±3.79 N/A N/A N/A 0.103±0.00 N/A 0.072±0.00 1.086±0.60
ENSG00000250772 ENST00000503266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.437±0.00
ENST00000512219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250938 ENST00000503073 N/A N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000504106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.426±0.00 N/A N/A N/A
ENSG00000253825 ENST00000518701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.19

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