C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172421-ENSG00000087995 CGP 9606 17:62370218-62450822
GeneTranscriptPositionBiotype
ENSG00000087995 (METTL2A)
methyltransferase like 2A 		ENST00000311506 (METTL2A-001) 62423867-62450093 protein_coding
ENST00000333483 (METTL2A-002) 62423875-62448914 retained_intron
ENST00000582027 (METTL2A-003) 62434861-62440756 retained_intron
ENST00000616852 (METTL2A-201) 62423891-62450822 protein_coding
ENSG00000172421 (EFCAB3)
EF-hand calcium binding domain 3 		ENST00000305286 (EFCAB3-001) 62380553-62416476 protein_coding
ENST00000450662 (EFCAB3-002) 62370218-62416476 protein_coding
ENST00000518576 (EFCAB3-004) 62380583-62395188 protein_coding
ENST00000520404 (EFCAB3-003) 62380556-62406514 protein_coding
ENSG00000239527 (RPS23P7)
ribosomal protein S23 pseudogene 7 		ENST00000466210 (RPS23P7-001) 62397397-62398142 processed_pseudogene
ENSG00000239809 (RP11-51L5.2)
 ENST00000495438 (RP11-51L5.2-001) 62381668-62382015 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0006ZX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020690-ENSMUSG00000020691 CGP 10090 11:105063592-105140394
GeneTranscriptPositionBiotype
ENSMUSG00000020690 (Efcab3)
EF-hand calcium binding domain 3 		ENSMUST00000021029 (Efcab3-003) 105092206-105117537 protein_coding
ENSMUST00000136876 (Efcab3-002) 105063592-105089076 protein_coding
ENSMUST00000137086 (Efcab3-001) 105066838-105106439 protein_coding
ENSMUST00000154543 (Efcab3-004) 105112656-105117535 processed_transcript
ENSMUSG00000020691 (Mettl2)
methyltransferase like 2 		ENSMUST00000021030 (Mettl2-001) 105126425-105140394 protein_coding
ENSMUST00000129012 (Mettl2-004) 105132460-105135656 processed_transcript
ENSMUST00000132185 (Mettl2-005) 105132449-105138981 processed_transcript
ENSMUST00000136214 (Mettl2-002) 105126479-105140394 processed_transcript
ENSMUST00000155460 (Mettl2-003) 105137563-105140394 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZX_0001ENSG00000087995ENST00000311506ENST00000333483ENST00000582027ENST00000616852ENSG00000172421ENST00000305286ENST00000450662ENST00000518576ENST00000520404ENSG00000239527ENST00000466210ENSG00000239809ENST00000495438CIL_0006ZX_0002ENSMUSG00000020690ENSMUST00000021029ENSMUST00000136876ENSMUST00000137086ENSMUST00000154543ENSMUSG00000020691ENSMUST00000021030ENSMUST00000129012ENSMUST00000132185ENSMUST00000136214ENSMUST00000155460
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZX_0001ENSG00000087995ENST00000311506ENST00000333483ENST00000582027ENST00000616852ENSG00000172421ENST00000305286ENST00000450662ENST00000520404ENSG00000239527ENST00000466210ENSG00000239809ENST00000495438CIL_0006ZX_0002ENSMUSG00000020690ENSMUST00000021029ENSMUST00000136876ENSMUST00000137086ENSMUST00000154543ENSMUSG00000020691ENSMUST00000021030ENSMUST00000132185ENSMUST00000136214ENSMUST00000155460
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087995 ENST00000311506 0.452±0.00 N/A 0.132±0.00 0.814±0.43 0.936±0.00 0.479±0.06 N/A N/A 0.603±0.00 0.178±0.00 N/A 0.722±0.00 0.397±0.10 N/A
ENST00000333483 0.505±0.00 1.102±0.00 N/A 0.404±0.00 0.725±0.00 1.388±0.07 0.785±0.45 1.235±0.22 1.529±0.00 1.197±0.80 0.456±0.02 3.155±0.62 3.053±0.64 1.713±0.33
ENST00000582027 N/A N/A 0.610±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.327±0.00 N/A 1.524±0.00
ENST00000616852 0.838±0.00 N/A N/A 0.799±0.00 0.845±0.00 0.424±0.00 1.239±0.00 1.744±0.00 0.620±0.49 N/A 0.907±0.00 1.407±0.76 2.269±0.00 1.162±0.00
ENSG00000172421 ENST00000305286 N/A 0.028±0.00 0.028±0.00 N/A N/A N/A 0.006±0.00 0.041±0.00 0.012±0.00 N/A N/A 0.073±0.04 0.066±0.03 1.207±0.75
ENST00000450662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00
ENST00000518576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520404 N/A N/A N/A 0.430±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239527 ENST00000466210 N/A 0.063±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A 0.029±0.00 0.056±0.00 N/A N/A 0.073±0.04
ENSG00000239809 ENST00000495438 0.406±0.00 0.825±0.00 N/A N/A 0.657±0.00 0.146±0.00 N/A 0.162±0.00 N/A 0.165±0.00 1.348±0.00 N/A N/A 0.295±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020690 ENSMUST00000021029 0.034±0.00 N/A 0.007±0.00 0.067±0.06 N/A N/A 0.039±0.00 N/A 0.031±0.00 0.032±0.00 0.018±0.00 0.200±0.03 0.033±0.02 29.292±5.68
ENSMUST00000136876 N/A N/A 0.030±0.00 0.348±0.00 N/A N/A N/A N/A 0.023±0.00 N/A 0.048±0.00 0.781±0.65 0.164±0.10 N/A
ENSMUST00000137086 N/A N/A 0.006±0.00 0.013±0.00 N/A N/A N/A N/A 0.018±0.01 N/A N/A 0.268±0.00 0.028±0.00 N/A
ENSMUST00000154543 0.059±0.00 N/A N/A 0.015±0.00 N/A N/A 0.013±0.00 0.126±0.07 0.087±0.02 N/A N/A 0.234±0.00 0.039±0.03 46.085±1.20
ENSMUSG00000020691 ENSMUST00000021030 5.818±0.73 5.844±1.03 5.604±1.35 6.814±1.36 4.224±1.27 3.071±1.03 2.277±0.54 3.151±0.41 5.618±2.73 3.058±0.54 1.583±0.82 5.523±1.99 5.126±2.17 5.091±2.20
ENSMUST00000129012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.372±0.25
ENSMUST00000136214 1.694±0.85 1.870±0.28 2.205±0.52 4.012±0.50 1.712±0.65 1.054±0.30 0.716±0.09 0.623±0.12 2.119±1.39 1.833±0.38 0.764±0.23 2.055±0.47 2.638±0.31 2.235±0.54
ENSMUST00000155460 2.637±0.41 3.807±1.19 2.113±0.00 1.683±0.00 2.689±0.82 3.040±1.26 1.563±0.20 1.979±0.65 1.767±0.13 3.139±0.02 1.063±0.00 4.899±1.27 5.333±0.00 N/A

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